RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 C22orf23Q9BZE7 217 aa23.94■■□□□ 1.42
TNFRSF8-204ENST00000479933 LNPKQ9C0E8 428 aa23.94■■□□□ 1.42
TNFRSF8-204ENST00000479933 FRAT2O75474 233 aaPredicted RBP23.93■■□□□ 1.42
TNFRSF8-204ENST00000479933 ZMYND15Q9H091 742 aa23.93■■□□□ 1.42
TNFRSF8-204ENST00000479933 CRB1P82279 1406 aa23.93■■□□□ 1.42
TNFRSF8-204ENST00000479933 BMP2KLQ5H9B9 411 aa23.93■■□□□ 1.42
TNFRSF8-204ENST00000479933 L1TD1Q5T7N2 865 aaKnown RBP23.93■■□□□ 1.42
TNFRSF8-204ENST00000479933 PTPRCP08575 1304 aa23.93■■□□□ 1.42
TNFRSF8-204ENST00000479933 CEP170BQ9Y4F5 1589 aaPredicted RBP23.92■■□□□ 1.42
TNFRSF8-204ENST00000479933 AMPHP49418 695 aa23.92■■□□□ 1.42
TNFRSF8-204ENST00000479933 MCM10Q7L590 875 aa23.92■■□□□ 1.42
TNFRSF8-204ENST00000479933 ANKRD45Q5TZF3 282 aa23.91■■□□□ 1.42
TNFRSF8-204ENST00000479933 RRAGDQ9NQL2 400 aaPredicted RBP23.91■■□□□ 1.42
TNFRSF8-204ENST00000479933 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
TNFRSF8-204ENST00000479933 MFAP1P55081 439 aaKnown RBP23.9■■□□□ 1.42
TNFRSF8-204ENST00000479933 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
TNFRSF8-204ENST00000479933 RTF1Q92541 710 aaKnown RBP23.9■■□□□ 1.42
TNFRSF8-204ENST00000479933 SOX12O15370 315 aa23.9■■□□□ 1.42
TNFRSF8-204ENST00000479933 GAS2L2Q8NHY3 880 aa23.9■■□□□ 1.42
TNFRSF8-204ENST00000479933 HTATSF1O43719 755 aaKnown RBP23.89■■□□□ 1.42
TNFRSF8-204ENST00000479933 C1orf115Q9H7X2 142 aa23.89■■□□□ 1.42
TNFRSF8-204ENST00000479933 TBC1D2Q9BYX2 928 aa23.89■■□□□ 1.41
TNFRSF8-204ENST00000479933 SIRT2Q8IXJ6 389 aa23.88■■□□□ 1.41
TNFRSF8-204ENST00000479933 KCNA6P17658 529 aa23.87■■□□□ 1.41
TNFRSF8-204ENST00000479933 MTHFSDQ2M296 383 aaKnown RBP23.87■■□□□ 1.41
TNFRSF8-204ENST00000479933 RGS12O14924 1447 aa23.86■■□□□ 1.41
TNFRSF8-204ENST00000479933 NLRP6P59044 892 aa23.86■■□□□ 1.41
TNFRSF8-204ENST00000479933 MARF1Q9Y4F3 1742 aaKnown RBP23.86■■□□□ 1.41
TNFRSF8-204ENST00000479933 VSIG10Q8N0Z9 540 aa23.86■■□□□ 1.41
TNFRSF8-204ENST00000479933 EYA1Q99502 592 aa23.86■■□□□ 1.41
TNFRSF8-204ENST00000479933 RPAP2Q8IXW5 612 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF8-204ENST00000479933 RBM25P49756 843 aaKnown RBP23.84■■□□□ 1.41
TNFRSF8-204ENST00000479933 ANTXR1Q9H6X2 564 aa23.84■■□□□ 1.41
TNFRSF8-204ENST00000479933 CHD2O14647 1828 aaKnown RBP23.83■■□□□ 1.41
TNFRSF8-204ENST00000479933 DCTPP1Q9H773 170 aa23.83■■□□□ 1.41
TNFRSF8-204ENST00000479933 TSPYL4Q9UJ04 414 aa23.83■■□□□ 1.4
TNFRSF8-204ENST00000479933 LRRC37A3O60309 1634 aa23.83■■□□□ 1.4
TNFRSF8-204ENST00000479933 KRT24Q2M2I5 525 aa23.82■■□□□ 1.4
TNFRSF8-204ENST00000479933 ANKRD44Q8N8A2 993 aa23.82■■□□□ 1.4
TNFRSF8-204ENST00000479933 HSP90AA2PQ14568 343 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF8-204ENST00000479933 ZNF142P52746 1687 aaPredicted RBP23.81■■□□□ 1.4
TNFRSF8-204ENST00000479933 HOXC9P31274 260 aa23.81■■□□□ 1.4
TNFRSF8-204ENST00000479933 CLCN1P35523 988 aa23.81■■□□□ 1.4
TNFRSF8-204ENST00000479933 RTL1A6NKG5 1358 aa23.81■■□□□ 1.4
TNFRSF8-204ENST00000479933 SLKQ9H2G2 1235 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF8-204ENST00000479933 SOS1Q07889 1333 aaPredicted RBP23.8■■□□□ 1.4
TNFRSF8-204ENST00000479933 ATP10DQ9P241 1426 aa23.79■■□□□ 1.4
TNFRSF8-204ENST00000479933 FOXO3O43524 673 aa23.79■■□□□ 1.4
TNFRSF8-204ENST00000479933 SLC4A2P04920 1241 aa23.79■■□□□ 1.4
TNFRSF8-204ENST00000479933 ANKLE2Q86XL3 938 aa23.79■■□□□ 1.4
TNFRSF8-204ENST00000479933 ABTB2Q8N961 1025 aa23.78■■□□□ 1.4
TNFRSF8-204ENST00000479933 BABAM1Q9NWV8 329 aa23.78■■□□□ 1.4
TNFRSF8-204ENST00000479933 GNAT3A8MTJ3 354 aa23.77■■□□□ 1.4
TNFRSF8-204ENST00000479933 HSP90AA1P07900 732 aaKnown RBP23.77■■□□□ 1.4
TNFRSF8-204ENST00000479933 HSCBQ8IWL3 235 aa23.77■■□□□ 1.4
TNFRSF8-204ENST00000479933 MSH6P52701 1360 aa23.77■■□□□ 1.4
TNFRSF8-204ENST00000479933 NWD1Q149M9 1564 aa23.77■■□□□ 1.4
TNFRSF8-204ENST00000479933 CCT4P50991 539 aaKnown RBP23.76■■□□□ 1.39
TNFRSF8-204ENST00000479933 PHF8Q9UPP1 1060 aa23.76■■□□□ 1.39
TNFRSF8-204ENST00000479933 CACNA1FO60840 1977 aa23.76■■□□□ 1.39
TNFRSF8-204ENST00000479933 CEP85Q6P2H3 762 aa23.75■■□□□ 1.39
TNFRSF8-204ENST00000479933 SNX21Q969T3 373 aa23.75■■□□□ 1.39
TNFRSF8-204ENST00000479933 STK31Q9BXU1 1019 aa23.75■■□□□ 1.39
TNFRSF8-204ENST00000479933 CDC45O75419 566 aa23.74■■□□□ 1.39
TNFRSF8-204ENST00000479933 MIS18AQ9NYP9 233 aa23.74■■□□□ 1.39
TNFRSF8-204ENST00000479933 MAP3K5Q99683 1374 aa23.74■■□□□ 1.39
TNFRSF8-204ENST00000479933 HMMRO75330 724 aa23.73■■□□□ 1.39
TNFRSF8-204ENST00000479933 TBC1D9Q6ZT07 1266 aa23.73■■□□□ 1.39
TNFRSF8-204ENST00000479933 LTN1O94822 1766 aa23.73■■□□□ 1.39
TNFRSF8-204ENST00000479933 PLEKHM2Q8IWE5 1019 aa23.72■■□□□ 1.39
TNFRSF8-204ENST00000479933 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF8-204ENST00000479933 CCDC30Q5VVM6 783 aa23.72■■□□□ 1.39
TNFRSF8-204ENST00000479933 CHMP5Q9NZZ3 219 aa23.72■■□□□ 1.39
TNFRSF8-204ENST00000479933 FAM208AQ9UK61 1670 aaKnown RBP23.71■■□□□ 1.39
TNFRSF8-204ENST00000479933 NUTM2GQ5VZR2 741 aa23.71■■□□□ 1.39
TNFRSF8-204ENST00000479933 NAP1L5Q96NT1 182 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF8-204ENST00000479933 MEIS3Q99687 375 aa23.7■■□□□ 1.38
TNFRSF8-204ENST00000479933 ADGRL3Q9HAR2 1447 aa23.7■■□□□ 1.38
TNFRSF8-204ENST00000479933 TTC22Q5TAA0 569 aa23.69■■□□□ 1.38
TNFRSF8-204ENST00000479933 NCOA3Q9Y6Q9 1424 aa23.68■■□□□ 1.38
TNFRSF8-204ENST00000479933 NFAT5O94916 1531 aa23.68■■□□□ 1.38
TNFRSF8-204ENST00000479933 FSD2A1L4K1 749 aa23.68■■□□□ 1.38
TNFRSF8-204ENST00000479933 TAF7Q15545 349 aaPredicted RBP23.68■■□□□ 1.38
TNFRSF8-204ENST00000479933 IP6K1Q92551 441 aa23.68■■□□□ 1.38
TNFRSF8-204ENST00000479933 PHRF1Q9P1Y6 1649 aaKnown RBP23.68■■□□□ 1.38
TNFRSF8-204ENST00000479933 SETD1BQ9UPS6 1966 aaKnown RBP23.67■■□□□ 1.38
TNFRSF8-204ENST00000479933 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
TNFRSF8-204ENST00000479933 N4BP2Q86UW6 1770 aaPredicted RBP23.67■■□□□ 1.38
TNFRSF8-204ENST00000479933 G2E3Q7L622 706 aa23.66■■□□□ 1.38
TNFRSF8-204ENST00000479933 KCNH5Q8NCM2 988 aa23.66■■□□□ 1.38
TNFRSF8-204ENST00000479933 GSPT1P15170 499 aaKnown RBP23.65■■□□□ 1.38
TNFRSF8-204ENST00000479933 SLC4A10Q6U841 1118 aa23.65■■□□□ 1.38
TNFRSF8-204ENST00000479933 IL17REQ8NFR9 667 aa23.65■■□□□ 1.38
TNFRSF8-204ENST00000479933 GNAI2P04899 355 aa23.64■■□□□ 1.37
TNFRSF8-204ENST00000479933 LTV1Q96GA3 475 aaPredicted RBP23.64■■□□□ 1.37
TNFRSF8-204ENST00000479933 PXDNLA1KZ92 1463 aa23.64■■□□□ 1.37
TNFRSF8-204ENST00000479933 ADAMTSL3P82987 1691 aa23.64■■□□□ 1.37
TNFRSF8-204ENST00000479933 GNAI3P08754 354 aa23.63■■□□□ 1.37
TNFRSF8-204ENST00000479933 FLIIQ13045 1269 aa23.63■■□□□ 1.37
TNFRSF8-204ENST00000479933 CHMP4AQ9BY43 222 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms