RNA–Protein interactions for RNA: ENST00000479620.1

GRIK3-204, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 3

Gene GRIK3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-204ENST00000479620 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
GRIK3-204ENST00000479620 BCL11BQ9C0K0 894 aaPredicted RBP22.97■■□□□ 1.27
GRIK3-204ENST00000479620 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
GRIK3-204ENST00000479620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.27
GRIK3-204ENST00000479620 SHANK3Q9BYB0 1731 aa22.96■■□□□ 1.27
GRIK3-204ENST00000479620 APBA3O96018 575 aa22.94■■□□□ 1.26
GRIK3-204ENST00000479620 PPP2R1AP30153 589 aa22.94■■□□□ 1.26
GRIK3-204ENST00000479620 PARD3Q8TEW0 1356 aa22.93■■□□□ 1.26
GRIK3-204ENST00000479620 KDRP35968 1356 aa22.92■■□□□ 1.26
GRIK3-204ENST00000479620 PCDH11XQ9BZA7 1347 aa22.92■■□□□ 1.26
GRIK3-204ENST00000479620 PCDH11YQ9BZA8 1340 aa22.92■■□□□ 1.26
GRIK3-204ENST00000479620 PKD1L3Q7Z443 1732 aa22.92■■□□□ 1.26
GRIK3-204ENST00000479620 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
GRIK3-204ENST00000479620 EN1Q05925 392 aaPredicted RBP22.92■■□□□ 1.26
GRIK3-204ENST00000479620 SPG7Q9UQ90 795 aa22.92■■□□□ 1.26
GRIK3-204ENST00000479620 COL3A1P02461 1466 aaPredicted RBP22.92■■□□□ 1.26
GRIK3-204ENST00000479620 CAMKK2Q96RR4 588 aa22.91■■□□□ 1.26
GRIK3-204ENST00000479620 PTF1AQ7RTS3 328 aa22.9■■□□□ 1.26
GRIK3-204ENST00000479620 PLSCR1O15162 318 aa22.89■■□□□ 1.25
GRIK3-204ENST00000479620 CYP27B1O15528 508 aa22.89■■□□□ 1.25
GRIK3-204ENST00000479620 KCNQ2O43526 872 aa22.89■■□□□ 1.25
GRIK3-204ENST00000479620 SULT6B1Q6IMI4 303 aa22.89■■□□□ 1.25
GRIK3-204ENST00000479620 NHSQ6T4R5 1651 aa22.89■■□□□ 1.25
GRIK3-204ENST00000479620 ZNF316A6NFI3 1004 aaPredicted RBP22.88■■□□□ 1.25
GRIK3-204ENST00000479620 AEBP1Q8IUX7 1158 aa22.88■■□□□ 1.25
GRIK3-204ENST00000479620 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
GRIK3-204ENST00000479620 NKX1-1Q15270 411 aaPredicted RBP22.87■■□□□ 1.25
GRIK3-204ENST00000479620 RALBP1Q15311 655 aa22.87■■□□□ 1.25
GRIK3-204ENST00000479620 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
GRIK3-204ENST00000479620 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
GRIK3-204ENST00000479620 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
GRIK3-204ENST00000479620 PLEKHO1Q53GL0 409 aaPredicted RBP22.85■■□□□ 1.25
GRIK3-204ENST00000479620 RGPD3A6NKT7 1758 aaPredicted RBP22.85■■□□□ 1.25
GRIK3-204ENST00000479620 RGPD4Q7Z3J3 1758 aa22.85■■□□□ 1.25
GRIK3-204ENST00000479620 IFNL2Q8IZJ0 200 aa22.84■■□□□ 1.25
GRIK3-204ENST00000479620 PRIM1P49642 420 aaKnown RBP22.83■■□□□ 1.25
GRIK3-204ENST00000479620 KAT6BQ8WYB5 2073 aa22.83■■□□□ 1.24
GRIK3-204ENST00000479620 PHKG2P15735 406 aa22.82■■□□□ 1.24
GRIK3-204ENST00000479620 DOT1LQ8TEK3 1739 aa22.81■■□□□ 1.24
GRIK3-204ENST00000479620 RREB1Q92766 1687 aa22.81■■□□□ 1.24
GRIK3-204ENST00000479620 HMOX1P09601 288 aa22.8■■□□□ 1.24
GRIK3-204ENST00000479620 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
GRIK3-204ENST00000479620 U2SURPO15042 1029 aaKnown RBP22.79■■□□□ 1.24
GRIK3-204ENST00000479620 PROM2Q8N271 834 aa22.79■■□□□ 1.24
GRIK3-204ENST00000479620 BTAF1O14981 1849 aa22.79■■□□□ 1.24
GRIK3-204ENST00000479620 SYTL4Q96C24 671 aaPredicted RBP22.78■■□□□ 1.24
GRIK3-204ENST00000479620 HSP90AB1P08238 724 aaKnown RBP22.77■■□□□ 1.24
GRIK3-204ENST00000479620 ZNF530Q6P9A1 599 aaPredicted RBP22.77■■□□□ 1.24
GRIK3-204ENST00000479620 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
GRIK3-204ENST00000479620 TOGARAM1Q9Y4F4 1720 aa22.75■■□□□ 1.23
GRIK3-204ENST00000479620 MYBBP1AQ9BQG0 1328 aaKnown RBP22.75■■□□□ 1.23
GRIK3-204ENST00000479620 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
GRIK3-204ENST00000479620 DCAF5Q96JK2 942 aa22.74■■□□□ 1.23
GRIK3-204ENST00000479620 PRKRIP1Q9H875 184 aaPredicted RBP22.74■■□□□ 1.23
GRIK3-204ENST00000479620 C1orf141Q5JVX7 400 aa22.73■■□□□ 1.23
GRIK3-204ENST00000479620 ERVV-2B6SEH9 535 aa22.72■■□□□ 1.23
GRIK3-204ENST00000479620 FCHSD2O94868 740 aa22.72■■□□□ 1.23
GRIK3-204ENST00000479620 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
GRIK3-204ENST00000479620 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
GRIK3-204ENST00000479620 AKAP4Q5JQC9 854 aa22.72■■□□□ 1.23
GRIK3-204ENST00000479620 MPRIPQ6WCQ1 1025 aa22.72■■□□□ 1.23
GRIK3-204ENST00000479620 RSPH6AQ9H0K4 717 aa22.72■■□□□ 1.23
GRIK3-204ENST00000479620 ITGB4P16144 1822 aa22.72■■□□□ 1.23
GRIK3-204ENST00000479620 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
GRIK3-204ENST00000479620 NBPF14Q5TI25 921 aa22.71■■□□□ 1.23
GRIK3-204ENST00000479620 PIGBQ92521 554 aa22.7■■□□□ 1.22
GRIK3-204ENST00000479620 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
GRIK3-204ENST00000479620 SLC27A3Q5K4L6 730 aa22.69■■□□□ 1.22
GRIK3-204ENST00000479620 LY75O60449 1722 aa22.68■■□□□ 1.22
GRIK3-204ENST00000479620 TMOD3Q9NYL9 352 aa22.68■■□□□ 1.22
GRIK3-204ENST00000479620 PRKAR2BP31323 418 aa22.67■■□□□ 1.22
GRIK3-204ENST00000479620 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
GRIK3-204ENST00000479620 SMARCC1Q92922 1105 aaPredicted RBP22.67■■□□□ 1.22
GRIK3-204ENST00000479620 PHACTR3Q96KR7 559 aa22.66■■□□□ 1.22
GRIK3-204ENST00000479620 LRRC4BQ9NT99 713 aa22.66■■□□□ 1.22
GRIK3-204ENST00000479620 R3HDM1Q15032 1099 aaKnown RBP22.65■■□□□ 1.22
GRIK3-204ENST00000479620 SRCAPQ6ZRS2 3230 aa22.65■■□□□ 1.22
GRIK3-204ENST00000479620 PALLDQ8WX93 1383 aa22.63■■□□□ 1.21
GRIK3-204ENST00000479620 SCN11AQ9UI33 1791 aa22.63■■□□□ 1.21
GRIK3-204ENST00000479620 ADAMTS7Q9UKP4 1686 aa22.63■■□□□ 1.21
GRIK3-204ENST00000479620 PSDA5PKW4 1024 aaPredicted RBP22.63■■□□□ 1.21
GRIK3-204ENST00000479620 CABP4P57796 275 aa22.63■■□□□ 1.21
GRIK3-204ENST00000479620 ANO8Q9HCE9 1232 aaPredicted RBP22.63■■□□□ 1.21
GRIK3-204ENST00000479620 PAPPAQ13219 1627 aa22.62■■□□□ 1.21
GRIK3-204ENST00000479620 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
GRIK3-204ENST00000479620 HMGB2P26583 209 aaKnown RBP22.62■■□□□ 1.21
GRIK3-204ENST00000479620 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
GRIK3-204ENST00000479620 GNAT3A8MTJ3 354 aa22.61■■□□□ 1.21
GRIK3-204ENST00000479620 NFATC2IPQ8NCF5 419 aa22.61■■□□□ 1.21
GRIK3-204ENST00000479620 ATG3Q9NT62 314 aa22.61■■□□□ 1.21
GRIK3-204ENST00000479620 CCNL1Q9UK58 526 aaPredicted RBP22.61■■□□□ 1.21
GRIK3-204ENST00000479620 ASAP1Q9ULH1 1129 aa22.61■■□□□ 1.21
GRIK3-204ENST00000479620 SLC15A2Q16348 729 aa22.6■■□□□ 1.21
GRIK3-204ENST00000479620 PLEKHF1Q96S99 279 aa22.6■■□□□ 1.21
GRIK3-204ENST00000479620 PNNQ9H307 717 aaKnown RBP22.6■■□□□ 1.21
GRIK3-204ENST00000479620 STK32BQ9NY57 414 aa22.6■■□□□ 1.21
GRIK3-204ENST00000479620 MAP3K5Q99683 1374 aa22.6■■□□□ 1.21
GRIK3-204ENST00000479620 SLC52A2Q9HAB3 445 aa22.59■■□□□ 1.21
GRIK3-204ENST00000479620 MRC1P22897 1456 aa22.58■■□□□ 1.2
GRIK3-204ENST00000479620 KCNQ4P56696 695 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms