RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 SOS1Q07889 1333 aaPredicted RBP10.58□□□□□ -0.72
USP30-206ENST00000479219 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
USP30-206ENST00000479219 HTATSF1O43719 755 aaKnown RBP10.57□□□□□ -0.72
USP30-206ENST00000479219 MFAP1P55081 439 aaKnown RBP10.57□□□□□ -0.72
USP30-206ENST00000479219 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
USP30-206ENST00000479219 LNPKQ9C0E8 428 aa10.57□□□□□ -0.72
USP30-206ENST00000479219 ANTXR1Q9H6X2 564 aa10.57□□□□□ -0.72
USP30-206ENST00000479219 RTF1Q92541 710 aaKnown RBP10.57□□□□□ -0.72
USP30-206ENST00000479219 SLC26A8Q96RN1 970 aa10.57□□□□□ -0.72
USP30-206ENST00000479219 CRB1P82279 1406 aa10.57□□□□□ -0.72
USP30-206ENST00000479219 FAM83GA6ND36 823 aa10.56□□□□□ -0.72
USP30-206ENST00000479219 L1TD1Q5T7N2 865 aaKnown RBP10.56□□□□□ -0.72
USP30-206ENST00000479219 ANKRD45Q5TZF3 282 aa10.56□□□□□ -0.72
USP30-206ENST00000479219 HSCBQ8IWL3 235 aa10.56□□□□□ -0.72
USP30-206ENST00000479219 RPAP2Q8IXW5 612 aaPredicted RBP10.56□□□□□ -0.72
USP30-206ENST00000479219 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
USP30-206ENST00000479219 CEP170BQ9Y4F5 1589 aaPredicted RBP10.56□□□□□ -0.72
USP30-206ENST00000479219 N4BP2Q86UW6 1770 aaPredicted RBP10.56□□□□□ -0.72
USP30-206ENST00000479219 MAP3K19Q56UN5 1328 aa10.56□□□□□ -0.72
USP30-206ENST00000479219 IGSF1Q8N6C5 1336 aa10.56□□□□□ -0.72
USP30-206ENST00000479219 ELL2O00472 640 aaPredicted RBP10.56□□□□□ -0.72
USP30-206ENST00000479219 AEBP1Q8IUX7 1158 aa10.56□□□□□ -0.72
USP30-206ENST00000479219 RTL1A6NKG5 1358 aa10.55□□□□□ -0.72
USP30-206ENST00000479219 HSP90AB2PQ58FF8 381 aa10.55□□□□□ -0.72
USP30-206ENST00000479219 SNX21Q969T3 373 aa10.55□□□□□ -0.72
USP30-206ENST00000479219 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
USP30-206ENST00000479219 ZNF142P52746 1687 aaPredicted RBP10.55□□□□□ -0.72
USP30-206ENST00000479219 RGS12O14924 1447 aa10.55□□□□□ -0.72
USP30-206ENST00000479219 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 AMPHP49418 695 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 DCTPP1Q9H773 170 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 CHMP5Q9NZZ3 219 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 CHD2O14647 1828 aaKnown RBP10.54□□□□□ -0.72
USP30-206ENST00000479219 PLPPR3Q6T4P5 718 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
USP30-206ENST00000479219 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
USP30-206ENST00000479219 SIRT2Q8IXJ6 389 aa10.53□□□□□ -0.72
USP30-206ENST00000479219 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
USP30-206ENST00000479219 ATP10DQ9P241 1426 aa10.53□□□□□ -0.72
USP30-206ENST00000479219 NCOA3Q9Y6Q9 1424 aa10.53□□□□□ -0.72
USP30-206ENST00000479219 HMMRO75330 724 aa10.53□□□□□ -0.72
USP30-206ENST00000479219 CDC45O75419 566 aa10.53□□□□□ -0.72
USP30-206ENST00000479219 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
USP30-206ENST00000479219 MCM10Q7L590 875 aa10.53□□□□□ -0.72
USP30-206ENST00000479219 CCT4P50991 539 aaKnown RBP10.52□□□□□ -0.72
USP30-206ENST00000479219 CHMP4AQ9BY43 222 aa10.52□□□□□ -0.73
USP30-206ENST00000479219 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
USP30-206ENST00000479219 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
USP30-206ENST00000479219 LTN1O94822 1766 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 NUTM2FA1L443 756 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 TSPYL4Q9UJ04 414 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 CIZ1Q9ULV3 898 aaPredicted RBP10.51□□□□□ -0.73
USP30-206ENST00000479219 MSH6P52701 1360 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 PXDNLA1KZ92 1463 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 MTHFSDQ2M296 383 aaKnown RBP10.51□□□□□ -0.73
USP30-206ENST00000479219 GLIPR1L2Q4G1C9 344 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 CASC1Q6TDU7 716 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 STK31Q9BXU1 1019 aa10.51□□□□□ -0.73
USP30-206ENST00000479219 PTMSP20962 102 aa10.5□□□□□ -0.73
USP30-206ENST00000479219 NLRP6P59044 892 aa10.5□□□□□ -0.73
USP30-206ENST00000479219 CEP85Q6P2H3 762 aa10.5□□□□□ -0.73
USP30-206ENST00000479219 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
USP30-206ENST00000479219 EYA1Q99502 592 aa10.5□□□□□ -0.73
USP30-206ENST00000479219 NWD1Q149M9 1564 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 MAP3K5Q99683 1374 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 GNAT3A8MTJ3 354 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 SLC4A2P04920 1241 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 HOXC9P31274 260 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 TTC22Q5TAA0 569 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 CCDC30Q5VVM6 783 aa10.49□□□□□ -0.73
USP30-206ENST00000479219 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
USP30-206ENST00000479219 PLEKHM2Q8IWE5 1019 aa10.48□□□□□ -0.73
USP30-206ENST00000479219 RRAGDQ9NQL2 400 aaPredicted RBP10.48□□□□□ -0.73
USP30-206ENST00000479219 KCNA6P17658 529 aa10.48□□□□□ -0.73
USP30-206ENST00000479219 ADGRL3Q9HAR2 1447 aa10.48□□□□□ -0.73
USP30-206ENST00000479219 SOX12O15370 315 aa10.47□□□□□ -0.73
USP30-206ENST00000479219 HSP90AB1P08238 724 aaKnown RBP10.47□□□□□ -0.73
USP30-206ENST00000479219 GNAI3P08754 354 aa10.47□□□□□ -0.73
USP30-206ENST00000479219 MCM4P33991 863 aa10.47□□□□□ -0.73
USP30-206ENST00000479219 ABTB2Q8N961 1025 aa10.47□□□□□ -0.73
USP30-206ENST00000479219 SETD1BQ9UPS6 1966 aaKnown RBP10.47□□□□□ -0.73
USP30-206ENST00000479219 KRT24Q2M2I5 525 aa10.46□□□□□ -0.73
USP30-206ENST00000479219 ANKLE2Q86XL3 938 aa10.46□□□□□ -0.73
USP30-206ENST00000479219 NFAT5O94916 1531 aa10.46□□□□□ -0.74
USP30-206ENST00000479219 LMO7Q8WWI1 1683 aa10.46□□□□□ -0.74
USP30-206ENST00000479219 GNAI2P04899 355 aa10.46□□□□□ -0.74
USP30-206ENST00000479219 DDIT3P35638 169 aa10.46□□□□□ -0.74
USP30-206ENST00000479219 RABEP1Q15276 862 aa10.46□□□□□ -0.74
USP30-206ENST00000479219 KCNH5Q8NCM2 988 aa10.46□□□□□ -0.74
USP30-206ENST00000479219 OSBPL3Q9H4L5 887 aa10.45□□□□□ -0.74
USP30-206ENST00000479219 PHF8Q9UPP1 1060 aa10.45□□□□□ -0.74
USP30-206ENST00000479219 MED1Q15648 1581 aaPredicted RBP10.45□□□□□ -0.74
USP30-206ENST00000479219 K7ELQ4 463 aaPredicted RBP10.45□□□□□ -0.74
USP30-206ENST00000479219 HOXB7P09629 217 aa10.45□□□□□ -0.74
USP30-206ENST00000479219 GSPT1P15170 499 aaKnown RBP10.45□□□□□ -0.74
USP30-206ENST00000479219 TAF7Q15545 349 aaPredicted RBP10.45□□□□□ -0.74
USP30-206ENST00000479219 GBP4Q96PP9 640 aa10.45□□□□□ -0.74
USP30-206ENST00000479219 MEIS3Q99687 375 aa10.45□□□□□ -0.74
USP30-206ENST00000479219 KDM3BQ7LBC6 1761 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms