RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 TMEM94Q12767 1356 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 ZC3H6P61129 1189 aaKnown RBP5.28□□□□□ -1.56
USP25-208ENST00000478932 LMOD3Q0VAK6 560 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 NBPF6Q5VWK0 638 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 ITPRIPQ8IWB1 547 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 CABLES1Q8TDN4 633 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 LRRC59Q96AG4 307 aaKnown RBP5.28□□□□□ -1.56
USP25-208ENST00000478932 NBPF4Q96M43 638 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 CHL1O00533 1208 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 MVPQ14764 893 aaKnown RBP5.27□□□□□ -1.57
USP25-208ENST00000478932 RTF1Q92541 710 aaKnown RBP5.27□□□□□ -1.57
USP25-208ENST00000478932 AXIN2Q9Y2T1 843 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 PEAK1Q9H792 1746 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 NRKQ7Z2Y5 1582 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 ZNF142P52746 1687 aaPredicted RBP5.27□□□□□ -1.57
USP25-208ENST00000478932 IGSF1Q8N6C5 1336 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 NALCNQ8IZF0 1738 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 IPO8O15397 1037 aaKnown RBP5.27□□□□□ -1.57
USP25-208ENST00000478932 PDE4AP27815 886 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 TMEM57Q8N5G2 664 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 IP6K1Q92551 441 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 PIK3C2AO00443 1686 aa5.27□□□□□ -1.57
USP25-208ENST00000478932 KDRP35968 1356 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 ALDH1L2Q3SY69 923 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 ARHGEF25Q86VW2 580 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 REM2Q8IYK8 340 aaPredicted RBP5.26□□□□□ -1.57
USP25-208ENST00000478932 KCNH5Q8NCM2 988 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 IL17REQ8NFR9 667 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 FMN2Q9NZ56 1722 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 GNAT3A8MTJ3 354 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 NPM2Q86SE8 214 aaKnown RBP5.26□□□□□ -1.57
USP25-208ENST00000478932 MRPL50Q8N5N7 158 aaKnown RBP5.26□□□□□ -1.57
USP25-208ENST00000478932 BACH2Q9BYV9 841 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 TSPYL4Q9UJ04 414 aa5.26□□□□□ -1.57
USP25-208ENST00000478932 KIF16BQ96L93 1317 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 ZNF335Q9H4Z2 1342 aaPredicted RBP5.25□□□□□ -1.57
USP25-208ENST00000478932 CADPS2Q86UW7 1296 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 GAS2L2Q8NHY3 880 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 NECTIN2Q92692 538 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 ZNF428Q96B54 188 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 ZBTB40Q9NUA8 1239 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 DDX19BQ9UMR2 479 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 DLG5Q8TDM6 1919 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 C1orf167Q5SNV9 1468 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 ARHGEF10O15013 1369 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 MS4A1P11836 297 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 CHRNA2Q15822 529 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 BCL11AQ9H165 835 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 C1orf115Q9H7X2 142 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 LGR6Q9HBX8 967 aa5.25□□□□□ -1.57
USP25-208ENST00000478932 ZBTB7BO15156 539 aaPredicted RBP5.24□□□□□ -1.57
USP25-208ENST00000478932 RWDD1Q9H446 243 aaPredicted RBP5.24□□□□□ -1.57
USP25-208ENST00000478932 CRB1P82279 1406 aa5.24□□□□□ -1.57
USP25-208ENST00000478932 BRPF1P55201 1214 aaPredicted RBP5.24□□□□□ -1.57
USP25-208ENST00000478932 MPRIPQ6WCQ1 1025 aa5.24□□□□□ -1.57
USP25-208ENST00000478932 ANKRD24Q8TF21 1146 aa5.24□□□□□ -1.57
USP25-208ENST00000478932 SLAIN2Q9P270 581 aa5.24□□□□□ -1.57
USP25-208ENST00000478932 KIF24Q5T7B8 1368 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 AAMPQ13685 434 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 POTEGQ6S5H5 508 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 G2E3Q7L622 706 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 ARHGAP45Q92619 1136 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 NLRP2Q9NX02 1062 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 PDZRN3Q9UPQ7 1066 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 GOLGB1Q14789 3259 aaKnown RBP5.23□□□□□ -1.57
USP25-208ENST00000478932 SPDYE2BA6NHP3 402 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 F6X3S4 739 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 SPDYE6P0CI01 402 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 TAF7Q15545 349 aaPredicted RBP5.23□□□□□ -1.57
USP25-208ENST00000478932 SPDYE2Q495Y8 402 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 BRINP3Q76B58 766 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 NPHP3Q7Z494 1330 aa5.23□□□□□ -1.57
USP25-208ENST00000478932 MSH6P52701 1360 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 MST1RQ04912 1400 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 KCNQ3O43525 872 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 ZNF530Q6P9A1 599 aaPredicted RBP5.22□□□□□ -1.57
USP25-208ENST00000478932 SLC4A10Q6U841 1118 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 RGPD1P0DJD0 1748 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 HTATSF1O43719 755 aaKnown RBP5.22□□□□□ -1.57
USP25-208ENST00000478932 CSB-PGBD3P0DP91 1061 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 ANP32AP39687 249 aaKnown RBP5.22□□□□□ -1.57
USP25-208ENST00000478932 C8orf34Q49A92 452 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 SIRT2Q8IXJ6 389 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 MARF1Q9Y4F3 1742 aaKnown RBP5.22□□□□□ -1.57
USP25-208ENST00000478932 USP19O94966 1318 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 ERBB3P21860 1342 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 MAP3K5Q99683 1374 aa5.22□□□□□ -1.57
USP25-208ENST00000478932 NFAT5O94916 1531 aa5.21□□□□□ -1.57
USP25-208ENST00000478932 NWD1Q149M9 1564 aa5.21□□□□□ -1.57
USP25-208ENST00000478932 STRCP1A6NGW2 1772 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 SEC24BO95487 1268 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 EIF2S2P20042 333 aaKnown RBP5.21□□□□□ -1.58
USP25-208ENST00000478932 TEFQ10587 303 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 HDAC1Q13547 482 aaPredicted RBP5.21□□□□□ -1.58
USP25-208ENST00000478932 FAM161AQ3B820 660 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 API5Q9BZZ5 524 aaKnown RBP5.21□□□□□ -1.58
USP25-208ENST00000478932 RTL1A6NKG5 1358 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 KIAA0232Q92628 1395 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 LMTK3Q96Q04 1460 aa5.21□□□□□ -1.58
USP25-208ENST00000478932 FXR2P51116 673 aaKnown RBP eCLIP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms