RNA–Protein interactions for RNA: ENST00000478548.1

MEN1-215, Transcript of menin 1, human

TSL 2

Gene MEN1, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEN1-215	ENST00000478548	RAPGEF4	Q8WZA2	1011 aa		32.41	■■■□□ 2.78
MEN1-215	ENST00000478548	PTF1A	Q7RTS3	328 aa		32.4	■■■□□ 2.78
MEN1-215	ENST00000478548	ZCRB1	Q8TBF4	217 aa	Known RBP	32.4	■■■□□ 2.78
MEN1-215	ENST00000478548	TAT	P17735	454 aa	Predicted RBP	32.39	■■■□□ 2.78
MEN1-215	ENST00000478548	EZH2	Q15910	746 aa	Known RBP	32.39	■■■□□ 2.78
MEN1-215	ENST00000478548	CAMKK2	Q96RR4	588 aa		32.38	■■■□□ 2.77
MEN1-215	ENST00000478548	PKD1L3	Q7Z443	1732 aa		32.38	■■■□□ 2.77
MEN1-215	ENST00000478548	DDX54	Q8TDD1	881 aa	Known RBP	32.37	■■■□□ 2.77
MEN1-215	ENST00000478548	COL3A1	P02461	1466 aa	Predicted RBP	32.36	■■■□□ 2.77
MEN1-215	ENST00000478548	PPP2R1A	P30153	589 aa		32.34	■■■□□ 2.77
MEN1-215	ENST00000478548	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.33	■■■□□ 2.77
MEN1-215	ENST00000478548	PARD3	Q8TEW0	1356 aa		32.33	■■■□□ 2.77
MEN1-215	ENST00000478548	NHS	Q6T4R5	1651 aa		32.32	■■■□□ 2.76
MEN1-215	ENST00000478548	KCNQ2	O43526	872 aa		32.31	■■■□□ 2.76
MEN1-215	ENST00000478548	AEBP1	Q8IUX7	1158 aa		32.3	■■■□□ 2.76
MEN1-215	ENST00000478548	KDR	P35968	1356 aa		32.3	■■■□□ 2.76
MEN1-215	ENST00000478548	CYP27B1	O15528	508 aa		32.29	■■■□□ 2.76
MEN1-215	ENST00000478548	ACSBG1	Q96GR2	724 aa		32.28	■■■□□ 2.76
MEN1-215	ENST00000478548	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.28	■■■□□ 2.76
MEN1-215	ENST00000478548	DIAPH1	O60610	1272 aa	Known RBP	32.27	■■■□□ 2.76
MEN1-215	ENST00000478548	PLEKHG2	Q9H7P9	1386 aa		32.27	■■■□□ 2.76
MEN1-215	ENST00000478548	RREB1	Q92766	1687 aa		32.27	■■■□□ 2.76
MEN1-215	ENST00000478548	PCDH11X	Q9BZA7	1347 aa		32.27	■■■□□ 2.76
MEN1-215	ENST00000478548	PCDH11Y	Q9BZA8	1340 aa		32.27	■■■□□ 2.76
MEN1-215	ENST00000478548	SULT6B1	Q6IMI4	303 aa		32.26	■■■□□ 2.75
MEN1-215	ENST00000478548	DOT1L	Q8TEK3	1739 aa		32.25	■■■□□ 2.75
MEN1-215	ENST00000478548	PLSCR1	O15162	318 aa		32.24	■■■□□ 2.75
MEN1-215	ENST00000478548	SPG7	Q9UQ90	795 aa		32.24	■■■□□ 2.75
MEN1-215	ENST00000478548	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.23	■■■□□ 2.75
MEN1-215	ENST00000478548	RGPD4	Q7Z3J3	1758 aa		32.23	■■■□□ 2.75
MEN1-215	ENST00000478548	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.23	■■■□□ 2.75
MEN1-215	ENST00000478548	NUP188	Q5SRE5	1749 aa		32.22	■■■□□ 2.75
MEN1-215	ENST00000478548	PSD	A5PKW4	1024 aa	Predicted RBP	32.22	■■■□□ 2.75
MEN1-215	ENST00000478548	BTAF1	O14981	1849 aa		32.22	■■■□□ 2.75
MEN1-215	ENST00000478548	NKX1-1	Q15270	411 aa	Predicted RBP	32.21	■■■□□ 2.75
MEN1-215	ENST00000478548	KAT6B	Q8WYB5	2073 aa		32.21	■■■□□ 2.75
MEN1-215	ENST00000478548	TOGARAM1	Q9Y4F4	1720 aa		32.19	■■■□□ 2.74
MEN1-215	ENST00000478548	SRCAP	Q6ZRS2	3230 aa		32.18	■■■□□ 2.74
MEN1-215	ENST00000478548	PRIM1	P49642	420 aa	Known RBP	32.18	■■■□□ 2.74
MEN1-215	ENST00000478548	HMOX1	P09601	288 aa		32.17	■■■□□ 2.74
MEN1-215	ENST00000478548	PHKG2	P15735	406 aa		32.17	■■■□□ 2.74
MEN1-215	ENST00000478548	R3HDM1	Q15032	1099 aa	Known RBP	32.17	■■■□□ 2.74
MEN1-215	ENST00000478548	PROM2	Q8N271	834 aa		32.17	■■■□□ 2.74
MEN1-215	ENST00000478548	RALBP1	Q15311	655 aa		32.16	■■■□□ 2.74
MEN1-215	ENST00000478548	CFAP53	Q96M91	514 aa		32.16	■■■□□ 2.74
MEN1-215	ENST00000478548	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.15	■■■□□ 2.74
MEN1-215	ENST00000478548	IFNL2	Q8IZJ0	200 aa		32.14	■■■□□ 2.74
MEN1-215	ENST00000478548	AMOT	Q4VCS5	1084 aa		32.13	■■■□□ 2.73
MEN1-215	ENST00000478548	ITGB4	P16144	1822 aa		32.12	■■■□□ 2.73
MEN1-215	ENST00000478548	U2SURP	O15042	1029 aa	Known RBP	32.11	■■■□□ 2.73
MEN1-215	ENST00000478548	SYTL4	Q96C24	671 aa	Predicted RBP	32.1	■■■□□ 2.73
MEN1-215	ENST00000478548	TXNRD1	Q16881	649 aa		32.09	■■■□□ 2.73
MEN1-215	ENST00000478548	NBPF14	Q5TI25	921 aa		32.09	■■■□□ 2.73
MEN1-215	ENST00000478548	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.07	■■■□□ 2.72
MEN1-215	ENST00000478548	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.05	■■■□□ 2.72
MEN1-215	ENST00000478548	KDM6A	O15550	1401 aa	Predicted RBP	32.05	■■■□□ 2.72
MEN1-215	ENST00000478548	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.04	■■■□□ 2.72
MEN1-215	ENST00000478548	LY75	O60449	1722 aa		32.03	■■■□□ 2.72
MEN1-215	ENST00000478548	RSPH6A	Q9H0K4	717 aa		32.03	■■■□□ 2.72
MEN1-215	ENST00000478548	NUDC	Q9Y266	331 aa		32.03	■■■□□ 2.72
MEN1-215	ENST00000478548	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.03	■■■□□ 2.72
MEN1-215	ENST00000478548	MTHFSD	Q2M296	383 aa	Known RBP	32.02	■■■□□ 2.72
MEN1-215	ENST00000478548	MPRIP	Q6WCQ1	1025 aa		32.02	■■■□□ 2.72
MEN1-215	ENST00000478548	PIGB	Q92521	554 aa		32.01	■■■□□ 2.72
MEN1-215	ENST00000478548	DCAF5	Q96JK2	942 aa		32.01	■■■□□ 2.72
MEN1-215	ENST00000478548	HSP90AB1	P08238	724 aa	Known RBP	32	■■■□□ 2.71
MEN1-215	ENST00000478548	U2AF1L5	P0DN76	240 aa	Predicted RBP	32	■■■□□ 2.71
MEN1-215	ENST00000478548	U2AF1	Q01081	240 aa	Known RBP eCLIP	32	■■■□□ 2.71
MEN1-215	ENST00000478548	LRRC4B	Q9NT99	713 aa		32	■■■□□ 2.71
MEN1-215	ENST00000478548	C1orf141	Q5JVX7	400 aa		31.99	■■■□□ 2.71
MEN1-215	ENST00000478548	AKAP4	Q5JQC9	854 aa		31.98	■■■□□ 2.71
MEN1-215	ENST00000478548	PHACTR3	Q96KR7	559 aa		31.98	■■■□□ 2.71
MEN1-215	ENST00000478548	SCN11A	Q9UI33	1791 aa		31.98	■■■□□ 2.71
MEN1-215	ENST00000478548	PAPPA	Q13219	1627 aa		31.97	■■■□□ 2.71
MEN1-215	ENST00000478548	LRP5	O75197	1615 aa		31.97	■■■□□ 2.71
MEN1-215	ENST00000478548	ERVV-2	B6SEH9	535 aa		31.97	■■■□□ 2.71
MEN1-215	ENST00000478548	PRKAR2B	P31323	418 aa		31.97	■■■□□ 2.71
MEN1-215	ENST00000478548	ADAMTS7	Q9UKP4	1686 aa		31.96	■■■□□ 2.71
MEN1-215	ENST00000478548	FCHSD2	O94868	740 aa		31.96	■■■□□ 2.71
MEN1-215	ENST00000478548	VIRMA	Q69YN4	1812 aa	Known RBP	31.94	■■■□□ 2.7
MEN1-215	ENST00000478548	TMOD3	Q9NYL9	352 aa		31.94	■■■□□ 2.7
MEN1-215	ENST00000478548	LGR6	Q9HBX8	967 aa		31.93	■■■□□ 2.7
MEN1-215	ENST00000478548	STK32B	Q9NY57	414 aa		31.93	■■■□□ 2.7
MEN1-215	ENST00000478548	SLC27A3	Q5K4L6	730 aa		31.92	■■■□□ 2.7
MEN1-215	ENST00000478548	KCNQ4	P56696	695 aa		31.91	■■■□□ 2.7
MEN1-215	ENST00000478548	PALLD	Q8WX93	1383 aa		31.91	■■■□□ 2.7
MEN1-215	ENST00000478548	SLC15A2	Q16348	729 aa		31.9	■■■□□ 2.7
MEN1-215	ENST00000478548	ASAP1	Q9ULH1	1129 aa		31.9	■■■□□ 2.7
MEN1-215	ENST00000478548	ATG3	Q9NT62	314 aa		31.89	■■■□□ 2.7
MEN1-215	ENST00000478548	RNMT	O43148	476 aa	Known RBP	31.88	■■■□□ 2.69
MEN1-215	ENST00000478548	GAS2L2	Q8NHY3	880 aa		31.88	■■■□□ 2.69
MEN1-215	ENST00000478548	PLEKHF1	Q96S99	279 aa		31.88	■■■□□ 2.69
MEN1-215	ENST00000478548	SMARCC1	Q92922	1105 aa	Predicted RBP	31.87	■■■□□ 2.69
MEN1-215	ENST00000478548	MRC1	P22897	1456 aa		31.87	■■■□□ 2.69
MEN1-215	ENST00000478548	CABP4	P57796	275 aa		31.86	■■■□□ 2.69
MEN1-215	ENST00000478548	ZNF827	Q17R98	1081 aa		31.86	■■■□□ 2.69
MEN1-215	ENST00000478548	NFATC2IP	Q8NCF5	419 aa		31.86	■■■□□ 2.69
MEN1-215	ENST00000478548	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.86	■■■□□ 2.69
MEN1-215	ENST00000478548	CCNL1	Q9UK58	526 aa	Predicted RBP	31.86	■■■□□ 2.69
MEN1-215	ENST00000478548	CASZ1	Q86V15	1759 aa		31.85	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms