RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
U2AF1-210ENST00000478282 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.54
U2AF1-210ENST00000478282 SIRT2Q8IXJ6 389 aa18.39■□□□□ 0.54
U2AF1-210ENST00000478282 MRPL50Q8N5N7 158 aaKnown RBP18.39■□□□□ 0.54
U2AF1-210ENST00000478282 ZNF445P59923 1031 aa18.39■□□□□ 0.53
U2AF1-210ENST00000478282 SRPK2P78362 688 aaKnown RBP18.39■□□□□ 0.53
U2AF1-210ENST00000478282 OFD1O75665 1012 aa18.38■□□□□ 0.53
U2AF1-210ENST00000478282 FCHSD2O94868 740 aa18.38■□□□□ 0.53
U2AF1-210ENST00000478282 RABEP1Q15276 862 aa18.38■□□□□ 0.53
U2AF1-210ENST00000478282 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
U2AF1-210ENST00000478282 CD163L1Q9NR16 1453 aa18.38■□□□□ 0.53
U2AF1-210ENST00000478282 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
U2AF1-210ENST00000478282 ABCC4O15439 1325 aa18.37■□□□□ 0.53
U2AF1-210ENST00000478282 VAMP4O75379 141 aa18.37■□□□□ 0.53
U2AF1-210ENST00000478282 MSNP26038 577 aaKnown RBP18.37■□□□□ 0.53
U2AF1-210ENST00000478282 PDCL3Q9H2J4 239 aa18.37■□□□□ 0.53
U2AF1-210ENST00000478282 NUCB2P80303 420 aa18.36■□□□□ 0.53
U2AF1-210ENST00000478282 KIF20BQ96Q89 1820 aa18.36■□□□□ 0.53
U2AF1-210ENST00000478282 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.36■□□□□ 0.53
U2AF1-210ENST00000478282 ATP7BP35670 1465 aa18.36■□□□□ 0.53
U2AF1-210ENST00000478282 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
U2AF1-210ENST00000478282 CFAP44Q96MT7 982 aa18.35■□□□□ 0.53
U2AF1-210ENST00000478282 ADGRL3Q9HAR2 1447 aa18.35■□□□□ 0.53
U2AF1-210ENST00000478282 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
U2AF1-210ENST00000478282 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
U2AF1-210ENST00000478282 HS1BP3Q53T59 392 aa18.35■□□□□ 0.53
U2AF1-210ENST00000478282 MCTP1Q6DN14 999 aa18.35■□□□□ 0.53
U2AF1-210ENST00000478282 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
U2AF1-210ENST00000478282 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
U2AF1-210ENST00000478282 AKAP12Q02952 1782 aa18.34■□□□□ 0.53
U2AF1-210ENST00000478282 TERF1P54274 439 aa18.34■□□□□ 0.53
U2AF1-210ENST00000478282 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
U2AF1-210ENST00000478282 MINK1Q8N4C8 1332 aaPredicted RBP18.34■□□□□ 0.53
U2AF1-210ENST00000478282 ZSCAN23Q3MJ62 389 aa18.33■□□□□ 0.53
U2AF1-210ENST00000478282 LMBRD1Q9NUN5 540 aa18.33■□□□□ 0.53
U2AF1-210ENST00000478282 CAVIN1Q6NZI2 390 aaKnown RBP18.33■□□□□ 0.52
U2AF1-210ENST00000478282 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.52
U2AF1-210ENST00000478282 TSPYL6Q8N831 410 aa18.33■□□□□ 0.52
U2AF1-210ENST00000478282 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
U2AF1-210ENST00000478282 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
U2AF1-210ENST00000478282 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
U2AF1-210ENST00000478282 RGPD8O14715 1765 aaPredicted RBP18.31■□□□□ 0.52
U2AF1-210ENST00000478282 MON2Q7Z3U7 1717 aa18.31■□□□□ 0.52
U2AF1-210ENST00000478282 NCLP19338 710 aaKnown RBP18.31■□□□□ 0.52
U2AF1-210ENST00000478282 GNAI1P63096 354 aa18.31■□□□□ 0.52
U2AF1-210ENST00000478282 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
U2AF1-210ENST00000478282 IFT57Q9NWB7 429 aa18.31■□□□□ 0.52
U2AF1-210ENST00000478282 PDLIM2Q96JY6 352 aa18.3■□□□□ 0.52
U2AF1-210ENST00000478282 THUMPD2Q9BTF0 503 aaKnown RBP18.3■□□□□ 0.52
U2AF1-210ENST00000478282 USP26Q9BXU7 913 aa18.3■□□□□ 0.52
U2AF1-210ENST00000478282 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-210ENST00000478282 DCCP43146 1447 aa18.3■□□□□ 0.52
U2AF1-210ENST00000478282 RBSNQ9H1K0 784 aa18.29■□□□□ 0.52
U2AF1-210ENST00000478282 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
U2AF1-210ENST00000478282 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
U2AF1-210ENST00000478282 API5Q9BZZ5 524 aaKnown RBP18.29■□□□□ 0.52
U2AF1-210ENST00000478282 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
U2AF1-210ENST00000478282 DCTPP1Q9H773 170 aa18.29■□□□□ 0.52
U2AF1-210ENST00000478282 LTBP4Q8N2S1 1624 aa18.29■□□□□ 0.52
U2AF1-210ENST00000478282 NRKQ7Z2Y5 1582 aa18.28■□□□□ 0.52
U2AF1-210ENST00000478282 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
U2AF1-210ENST00000478282 KIF24Q5T7B8 1368 aa18.28■□□□□ 0.52
U2AF1-210ENST00000478282 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
U2AF1-210ENST00000478282 PKP1Q13835 747 aa18.28■□□□□ 0.52
U2AF1-210ENST00000478282 PRR36Q9H6K5 1346 aa18.28■□□□□ 0.52
U2AF1-210ENST00000478282 ZNF500O60304 480 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-210ENST00000478282 INTS3Q68E01 1043 aaKnown RBP18.28■□□□□ 0.52
U2AF1-210ENST00000478282 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
U2AF1-210ENST00000478282 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
U2AF1-210ENST00000478282 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.52
U2AF1-210ENST00000478282 PRIM1P49642 420 aaKnown RBP18.26■□□□□ 0.51
U2AF1-210ENST00000478282 POLKQ9UBT6 870 aa18.26■□□□□ 0.51
U2AF1-210ENST00000478282 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.26■□□□□ 0.51
U2AF1-210ENST00000478282 HMOX1P09601 288 aa18.25■□□□□ 0.51
U2AF1-210ENST00000478282 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
U2AF1-210ENST00000478282 ST18O60284 1047 aa18.25■□□□□ 0.51
U2AF1-210ENST00000478282 GPT2Q8TD30 523 aa18.25■□□□□ 0.51
U2AF1-210ENST00000478282 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
U2AF1-210ENST00000478282 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
U2AF1-210ENST00000478282 R3HCC1Q9Y3T6 440 aaKnown RBP18.25■□□□□ 0.51
U2AF1-210ENST00000478282 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
U2AF1-210ENST00000478282 ZGPATQ8N5A5 531 aaKnown RBP18.24■□□□□ 0.51
U2AF1-210ENST00000478282 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
U2AF1-210ENST00000478282 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 ZDHHC9Q9Y397 364 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 CASC1Q6TDU7 716 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 NUDT16Q96DE0 195 aaKnown RBP18.23■□□□□ 0.51
U2AF1-210ENST00000478282 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
U2AF1-210ENST00000478282 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
U2AF1-210ENST00000478282 ZNF335Q9H4Z2 1342 aaPredicted RBP18.22■□□□□ 0.51
U2AF1-210ENST00000478282 FBLN1P23142 703 aa18.22■□□□□ 0.51
U2AF1-210ENST00000478282 LRSAM1Q6UWE0 723 aa18.22■□□□□ 0.51
U2AF1-210ENST00000478282 ANKRD44Q8N8A2 993 aa18.22■□□□□ 0.51
U2AF1-210ENST00000478282 MAP7D2Q96T17 732 aa18.22■□□□□ 0.51
U2AF1-210ENST00000478282 SDSP20132 328 aa18.21■□□□□ 0.51
U2AF1-210ENST00000478282 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
U2AF1-210ENST00000478282 USP54Q70EL1 1684 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms