RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 RBM33Q96EV2 1170 aaKnown RBP19.85■□□□□ 0.77
LINC00996-201ENST00000477392 NFAT5O94916 1531 aa19.85■□□□□ 0.77
LINC00996-201ENST00000477392 ABTB2Q8N961 1025 aa19.84■□□□□ 0.77
LINC00996-201ENST00000477392 API5Q9BZZ5 524 aaKnown RBP19.84■□□□□ 0.77
LINC00996-201ENST00000477392 RTL1A6NKG5 1358 aa19.83■□□□□ 0.76
LINC00996-201ENST00000477392 CHMP4BQ9H444 224 aaKnown RBP19.81■□□□□ 0.76
LINC00996-201ENST00000477392 SLC4A3P48751 1232 aa19.81■□□□□ 0.76
LINC00996-201ENST00000477392 GAS2L2Q8NHY3 880 aa19.81■□□□□ 0.76
LINC00996-201ENST00000477392 C1orf115Q9H7X2 142 aa19.81■□□□□ 0.76
LINC00996-201ENST00000477392 NUCB1Q02818 461 aa19.8■□□□□ 0.76
LINC00996-201ENST00000477392 HAP1P54257 671 aaPredicted RBP19.8■□□□□ 0.76
LINC00996-201ENST00000477392 PHRF1Q9P1Y6 1649 aaKnown RBP19.8■□□□□ 0.76
LINC00996-201ENST00000477392 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
LINC00996-201ENST00000477392 SIRT2Q8IXJ6 389 aa19.78■□□□□ 0.76
LINC00996-201ENST00000477392 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
LINC00996-201ENST00000477392 C14orf37Q86TY3 774 aa19.77■□□□□ 0.76
LINC00996-201ENST00000477392 FAM208AQ9UK61 1670 aaKnown RBP19.77■□□□□ 0.75
LINC00996-201ENST00000477392 INTS3Q68E01 1043 aaKnown RBP19.76■□□□□ 0.75
LINC00996-201ENST00000477392 MSH6P52701 1360 aa19.76■□□□□ 0.75
LINC00996-201ENST00000477392 HTATSF1O43719 755 aaKnown RBP19.76■□□□□ 0.75
LINC00996-201ENST00000477392 ESCO1Q5FWF5 840 aa19.76■□□□□ 0.75
LINC00996-201ENST00000477392 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
LINC00996-201ENST00000477392 CHD1LQ86WJ1 897 aa19.75■□□□□ 0.75
LINC00996-201ENST00000477392 RGPD2P0DJD1 1756 aa19.75■□□□□ 0.75
LINC00996-201ENST00000477392 GCC1Q96CN9 775 aa19.75■□□□□ 0.75
LINC00996-201ENST00000477392 LTV1Q96GA3 475 aaPredicted RBP19.75■□□□□ 0.75
LINC00996-201ENST00000477392 TBC1D32Q96NH3 1257 aa19.75■□□□□ 0.75
LINC00996-201ENST00000477392 LNPKQ9C0E8 428 aa19.75■□□□□ 0.75
LINC00996-201ENST00000477392 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
LINC00996-201ENST00000477392 MAP3K5Q99683 1374 aa19.74■□□□□ 0.75
LINC00996-201ENST00000477392 PTPRCP08575 1304 aa19.74■□□□□ 0.75
LINC00996-201ENST00000477392 IP6K1Q92551 441 aa19.73■□□□□ 0.75
LINC00996-201ENST00000477392 ATP10DQ9P241 1426 aa19.73■□□□□ 0.75
LINC00996-201ENST00000477392 GNAT3A8MTJ3 354 aa19.73■□□□□ 0.75
LINC00996-201ENST00000477392 DAXXQ9UER7 740 aaPredicted RBP19.73■□□□□ 0.75
LINC00996-201ENST00000477392 SLIT3O75094 1523 aa19.72■□□□□ 0.75
LINC00996-201ENST00000477392 PSME1Q06323 249 aa19.72■□□□□ 0.75
LINC00996-201ENST00000477392 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
LINC00996-201ENST00000477392 UPF2Q9HAU5 1272 aaKnown RBP19.71■□□□□ 0.75
LINC00996-201ENST00000477392 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
LINC00996-201ENST00000477392 KIF1AQ12756 1690 aa19.7■□□□□ 0.74
LINC00996-201ENST00000477392 SLC4A2P04920 1241 aa19.69■□□□□ 0.74
LINC00996-201ENST00000477392 MED1Q15648 1581 aaPredicted RBP19.69■□□□□ 0.74
LINC00996-201ENST00000477392 ANKRD45Q5TZF3 282 aa19.69■□□□□ 0.74
LINC00996-201ENST00000477392 IL17REQ8NFR9 667 aa19.69■□□□□ 0.74
LINC00996-201ENST00000477392 RTL5Q5HYW3 569 aaPredicted RBP19.69■□□□□ 0.74
LINC00996-201ENST00000477392 CACNA1FO60840 1977 aa19.69■□□□□ 0.74
LINC00996-201ENST00000477392 G2E3Q7L622 706 aa19.68■□□□□ 0.74
LINC00996-201ENST00000477392 KCNH5Q8NCM2 988 aa19.68■□□□□ 0.74
LINC00996-201ENST00000477392 LMO7Q8WWI1 1683 aa19.67■□□□□ 0.74
LINC00996-201ENST00000477392 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
LINC00996-201ENST00000477392 NBPF6Q5VWK0 638 aa19.67■□□□□ 0.74
LINC00996-201ENST00000477392 NBPF4Q96M43 638 aa19.67■□□□□ 0.74
LINC00996-201ENST00000477392 CAMTA1Q9Y6Y1 1673 aa19.66■□□□□ 0.74
LINC00996-201ENST00000477392 NCAPD2Q15021 1401 aa19.66■□□□□ 0.74
LINC00996-201ENST00000477392 C1orf167Q5SNV9 1468 aa19.65■□□□□ 0.74
LINC00996-201ENST00000477392 CEMIPQ8WUJ3 1361 aa19.65■□□□□ 0.74
LINC00996-201ENST00000477392 KDM3BQ7LBC6 1761 aa19.65■□□□□ 0.74
LINC00996-201ENST00000477392 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
LINC00996-201ENST00000477392 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
LINC00996-201ENST00000477392 ANKRD44Q8N8A2 993 aa19.65■□□□□ 0.74
LINC00996-201ENST00000477392 MFAP1P55081 439 aaKnown RBP19.64■□□□□ 0.74
LINC00996-201ENST00000477392 MEIS3Q99687 375 aa19.64■□□□□ 0.74
LINC00996-201ENST00000477392 DCTPP1Q9H773 170 aa19.64■□□□□ 0.74
LINC00996-201ENST00000477392 BABAM1Q9NWV8 329 aa19.64■□□□□ 0.74
LINC00996-201ENST00000477392 CEP85Q6P2H3 762 aa19.64■□□□□ 0.73
LINC00996-201ENST00000477392 USP35Q9P2H5 1018 aa19.64■□□□□ 0.73
LINC00996-201ENST00000477392 STRCP1A6NGW2 1772 aa19.64■□□□□ 0.73
LINC00996-201ENST00000477392 ALS2Q96Q42 1657 aa19.64■□□□□ 0.73
LINC00996-201ENST00000477392 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
LINC00996-201ENST00000477392 PROSER2Q86WR7 435 aaPredicted RBP19.63■□□□□ 0.73
LINC00996-201ENST00000477392 BECN1Q14457 450 aa19.63■□□□□ 0.73
LINC00996-201ENST00000477392 ARHGEF25Q86VW2 580 aa19.63■□□□□ 0.73
LINC00996-201ENST00000477392 SOS1Q07889 1333 aaPredicted RBP19.62■□□□□ 0.73
LINC00996-201ENST00000477392 ZBTB7CA1YPR0 619 aa19.62■□□□□ 0.73
LINC00996-201ENST00000477392 F6X3S4 739 aa19.62■□□□□ 0.73
LINC00996-201ENST00000477392 GCP02774 474 aa19.62■□□□□ 0.73
LINC00996-201ENST00000477392 RPAP2Q8IXW5 612 aaPredicted RBP19.62■□□□□ 0.73
LINC00996-201ENST00000477392 C22orf23Q9BZE7 217 aa19.62■□□□□ 0.73
LINC00996-201ENST00000477392 LRRC59Q96AG4 307 aaKnown RBP19.61■□□□□ 0.73
LINC00996-201ENST00000477392 STK31Q9BXU1 1019 aa19.61■□□□□ 0.73
LINC00996-201ENST00000477392 MST1RQ04912 1400 aa19.61■□□□□ 0.73
LINC00996-201ENST00000477392 DEKP35659 375 aaKnown RBP19.61■□□□□ 0.73
LINC00996-201ENST00000477392 CCDC30Q5VVM6 783 aa19.61■□□□□ 0.73
LINC00996-201ENST00000477392 RGPD5Q99666 1765 aa19.61■□□□□ 0.73
LINC00996-201ENST00000477392 CCT4P50991 539 aaKnown RBP19.6■□□□□ 0.73
LINC00996-201ENST00000477392 FLIIQ13045 1269 aa19.59■□□□□ 0.73
LINC00996-201ENST00000477392 PXDNQ92626 1479 aa19.59■□□□□ 0.73
LINC00996-201ENST00000477392 NFKBIBQ15653 356 aa19.59■□□□□ 0.73
LINC00996-201ENST00000477392 TBC1D2Q9BYX2 928 aa19.59■□□□□ 0.73
LINC00996-201ENST00000477392 SLC4A10Q6U841 1118 aa19.58■□□□□ 0.73
LINC00996-201ENST00000477392 KRT28Q7Z3Y7 464 aa19.58■□□□□ 0.73
LINC00996-201ENST00000477392 C19orf44Q9H6X5 657 aa19.58■□□□□ 0.72
LINC00996-201ENST00000477392 PXDNLA1KZ92 1463 aa19.57■□□□□ 0.72
LINC00996-201ENST00000477392 PLEKHM2Q8IWE5 1019 aa19.57■□□□□ 0.72
LINC00996-201ENST00000477392 NECTIN2Q92692 538 aa19.57■□□□□ 0.72
LINC00996-201ENST00000477392 LGR6Q9HBX8 967 aa19.56■□□□□ 0.72
LINC00996-201ENST00000477392 GSPT1P15170 499 aaKnown RBP19.55■□□□□ 0.72
LINC00996-201ENST00000477392 LMOD2Q6P5Q4 547 aa19.55■□□□□ 0.72
LINC00996-201ENST00000477392 ANKRD24Q8TF21 1146 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms