RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 CCNL1Q9UK58 526 aaPredicted RBP22.31■■□□□ 1.16
SMG5-204ENST00000476954 ZNF692Q9BU19 519 aaPredicted RBP22.29■■□□□ 1.16
SMG5-204ENST00000476954 ANKRD36BQ8N2N9 1353 aa22.28■■□□□ 1.16
SMG5-204ENST00000476954 MON2Q7Z3U7 1717 aa22.27■■□□□ 1.16
SMG5-204ENST00000476954 WDR90Q96KV7 1748 aa22.27■■□□□ 1.16
SMG5-204ENST00000476954 IGSF1Q8N6C5 1336 aa22.27■■□□□ 1.16
SMG5-204ENST00000476954 KTN1Q86UP2 1357 aaKnown RBP22.26■■□□□ 1.15
SMG5-204ENST00000476954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.26■■□□□ 1.15
SMG5-204ENST00000476954 C5P01031 1676 aa22.26■■□□□ 1.15
SMG5-204ENST00000476954 HTRA3P83110 453 aa22.25■■□□□ 1.15
SMG5-204ENST00000476954 USP54Q70EL1 1684 aa22.25■■□□□ 1.15
SMG5-204ENST00000476954 EVC2Q86UK5 1308 aa22.25■■□□□ 1.15
SMG5-204ENST00000476954 NME9Q86XW9 330 aa22.24■■□□□ 1.15
SMG5-204ENST00000476954 USP31Q70CQ4 1352 aa22.23■■□□□ 1.15
SMG5-204ENST00000476954 TAF1LQ8IZX4 1826 aa22.22■■□□□ 1.15
SMG5-204ENST00000476954 TOMM70O94826 608 aa22.21■■□□□ 1.15
SMG5-204ENST00000476954 LTV1Q96GA3 475 aaPredicted RBP22.21■■□□□ 1.15
SMG5-204ENST00000476954 RGPD2P0DJD1 1756 aa22.2■■□□□ 1.14
SMG5-204ENST00000476954 SMIM5Q71RC9 77 aa22.2■■□□□ 1.14
SMG5-204ENST00000476954 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
SMG5-204ENST00000476954 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
SMG5-204ENST00000476954 TNS4Q8IZW8 715 aa22.19■■□□□ 1.14
SMG5-204ENST00000476954 CICQ96RK0 1608 aaPredicted RBP22.19■■□□□ 1.14
SMG5-204ENST00000476954 FAM208AQ9UK61 1670 aaKnown RBP22.18■■□□□ 1.14
SMG5-204ENST00000476954 USP47Q96K76 1375 aa22.18■■□□□ 1.14
SMG5-204ENST00000476954 NMRK2Q9NPI5 230 aa22.18■■□□□ 1.14
SMG5-204ENST00000476954 PRELPP51888 382 aa22.17■■□□□ 1.14
SMG5-204ENST00000476954 KLRG1Q96E93 195 aa22.16■■□□□ 1.14
SMG5-204ENST00000476954 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
SMG5-204ENST00000476954 MEGF6O75095 1541 aa22.15■■□□□ 1.14
SMG5-204ENST00000476954 SBNO2Q9Y2G9 1366 aa22.14■■□□□ 1.14
SMG5-204ENST00000476954 ZCRB1Q8TBF4 217 aaKnown RBP22.14■■□□□ 1.13
SMG5-204ENST00000476954 C4BP0C0L5 1744 aa22.13■■□□□ 1.13
SMG5-204ENST00000476954 CD163L1Q9NR16 1453 aa22.13■■□□□ 1.13
SMG5-204ENST00000476954 UBR3Q6ZT12 1888 aa22.13■■□□□ 1.13
SMG5-204ENST00000476954 FLAD1Q8NFF5 587 aa22.12■■□□□ 1.13
SMG5-204ENST00000476954 IP6K1Q92551 441 aa22.12■■□□□ 1.13
SMG5-204ENST00000476954 PHF14O94880 888 aa22.11■■□□□ 1.13
SMG5-204ENST00000476954 N4BP2Q86UW6 1770 aaPredicted RBP22.11■■□□□ 1.13
SMG5-204ENST00000476954 KIAA1551Q9HCM1 1747 aa22.11■■□□□ 1.13
SMG5-204ENST00000476954 RBM46Q8TBY0 533 aaKnown RBP22.08■■□□□ 1.13
SMG5-204ENST00000476954 PALLDQ8WX93 1383 aa22.08■■□□□ 1.12
SMG5-204ENST00000476954 PXDNLA1KZ92 1463 aa22.07■■□□□ 1.12
SMG5-204ENST00000476954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.06■■□□□ 1.12
SMG5-204ENST00000476954 FBLN1P23142 703 aa22.06■■□□□ 1.12
SMG5-204ENST00000476954 AK7Q96M32 723 aa22.06■■□□□ 1.12
SMG5-204ENST00000476954 KIF13BQ9NQT8 1826 aa22.04■■□□□ 1.12
SMG5-204ENST00000476954 BCS1LQ9Y276 419 aa22.04■■□□□ 1.12
SMG5-204ENST00000476954 ITGB4P16144 1822 aa22.03■■□□□ 1.12
SMG5-204ENST00000476954 MPRIPQ6WCQ1 1025 aa22.03■■□□□ 1.12
SMG5-204ENST00000476954 ARHGAP27Q6ZUM4 889 aa22.03■■□□□ 1.12
SMG5-204ENST00000476954 USHBP1Q8N6Y0 703 aa22.03■■□□□ 1.12
SMG5-204ENST00000476954 HOXC9P31274 260 aa22.02■■□□□ 1.12
SMG5-204ENST00000476954 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
SMG5-204ENST00000476954 MAP3K19Q56UN5 1328 aa22.02■■□□□ 1.12
SMG5-204ENST00000476954 A0A0G2JLW4 131 aa22.01■■□□□ 1.11
SMG5-204ENST00000476954 C16orf71Q8IYS4 520 aaPredicted RBP22.01■■□□□ 1.11
SMG5-204ENST00000476954 SLC12A5Q9H2X9 1139 aa22.01■■□□□ 1.11
SMG5-204ENST00000476954 EDC4Q6P2E9 1401 aaKnown RBP22■■□□□ 1.11
SMG5-204ENST00000476954 NBPF6Q5VWK0 638 aa22■■□□□ 1.11
SMG5-204ENST00000476954 NBPF4Q96M43 638 aa22■■□□□ 1.11
SMG5-204ENST00000476954 KCPQ6ZWJ8 1503 aa21.99■■□□□ 1.11
SMG5-204ENST00000476954 PCNTO95613 3336 aa21.99■■□□□ 1.11
SMG5-204ENST00000476954 MAP2P11137 1827 aaKnown RBP21.99■■□□□ 1.11
SMG5-204ENST00000476954 PKD1L3Q7Z443 1732 aa21.98■■□□□ 1.11
SMG5-204ENST00000476954 MMP10P09238 476 aa21.98■■□□□ 1.11
SMG5-204ENST00000476954 FSTL1Q12841 308 aa21.98■■□□□ 1.11
SMG5-204ENST00000476954 HDGFL2Q7Z4V5 671 aaPredicted RBP21.98■■□□□ 1.11
SMG5-204ENST00000476954 BRCA1P38398 1863 aaKnown RBP21.98■■□□□ 1.11
SMG5-204ENST00000476954 C9orf131Q5VYM1 1079 aa21.97■■□□□ 1.11
SMG5-204ENST00000476954 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
SMG5-204ENST00000476954 L3MBTL2Q969R5 705 aa21.97■■□□□ 1.11
SMG5-204ENST00000476954 A0A1W2PP64 1363 aa21.97■■□□□ 1.11
SMG5-204ENST00000476954 HSPA1AP0DMV8 641 aaKnown RBP21.96■■□□□ 1.11
SMG5-204ENST00000476954 HSPA1BP0DMV9 641 aaKnown RBP21.96■■□□□ 1.11
SMG5-204ENST00000476954 SSFA2P28290 1259 aa21.96■■□□□ 1.11
SMG5-204ENST00000476954 AMPHP49418 695 aa21.96■■□□□ 1.11
SMG5-204ENST00000476954 ROCK2O75116 1388 aaKnown RBP21.96■■□□□ 1.11
SMG5-204ENST00000476954 FCHSD2O94868 740 aa21.94■■□□□ 1.1
SMG5-204ENST00000476954 DPEP1P16444 411 aa21.94■■□□□ 1.1
SMG5-204ENST00000476954 RRAGCQ9HB90 399 aa21.94■■□□□ 1.1
SMG5-204ENST00000476954 SLC34A2O95436 690 aa21.93■■□□□ 1.1
SMG5-204ENST00000476954 RAPGEF4Q8WZA2 1011 aa21.93■■□□□ 1.1
SMG5-204ENST00000476954 NSD3Q9BZ95 1437 aa21.93■■□□□ 1.1
SMG5-204ENST00000476954 C10orf71Q711Q0 1435 aa21.92■■□□□ 1.1
SMG5-204ENST00000476954 GNPATO15228 680 aa21.92■■□□□ 1.1
SMG5-204ENST00000476954 CYP27B1O15528 508 aa21.92■■□□□ 1.1
SMG5-204ENST00000476954 TGFB2P61812 414 aa21.92■■□□□ 1.1
SMG5-204ENST00000476954 PIGBQ92521 554 aa21.92■■□□□ 1.1
SMG5-204ENST00000476954 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
SMG5-204ENST00000476954 ARFGEF1Q9Y6D6 1849 aa21.92■■□□□ 1.1
SMG5-204ENST00000476954 PCDH11XQ9BZA7 1347 aa21.91■■□□□ 1.1
SMG5-204ENST00000476954 PCDH11YQ9BZA8 1340 aa21.91■■□□□ 1.1
SMG5-204ENST00000476954 TATP17735 454 aaPredicted RBP21.91■■□□□ 1.1
SMG5-204ENST00000476954 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
SMG5-204ENST00000476954 ITPK1Q13572 414 aa21.91■■□□□ 1.1
SMG5-204ENST00000476954 PLEKHG2Q9H7P9 1386 aa21.9■■□□□ 1.1
SMG5-204ENST00000476954 CGNL1Q0VF96 1302 aa21.9■■□□□ 1.1
SMG5-204ENST00000476954 TNRC6CQ9HCJ0 1690 aaKnown RBP21.9■■□□□ 1.1
SMG5-204ENST00000476954 TERF2IPQ9NYB0 399 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms