RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 ERVK-7P63135 1459 aa11.48□□□□□ -0.57
KPNA1-206ENST00000476916 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
KPNA1-206ENST00000476916 MYSM1Q5VVJ2 828 aa11.47□□□□□ -0.57
KPNA1-206ENST00000476916 POLR3EQ9NVU0 708 aa11.47□□□□□ -0.57
KPNA1-206ENST00000476916 SLIT2O94813 1529 aa11.46□□□□□ -0.57
KPNA1-206ENST00000476916 MYOM2P54296 1465 aa11.46□□□□□ -0.57
KPNA1-206ENST00000476916 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
KPNA1-206ENST00000476916 RBM25P49756 843 aaKnown RBP11.46□□□□□ -0.57
KPNA1-206ENST00000476916 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
KPNA1-206ENST00000476916 RBM27Q9P2N5 1060 aaKnown RBP11.46□□□□□ -0.57
KPNA1-206ENST00000476916 MST1RQ04912 1400 aa11.45□□□□□ -0.58
KPNA1-206ENST00000476916 FMN1Q68DA7 1419 aa11.45□□□□□ -0.58
KPNA1-206ENST00000476916 PADI6Q6TGC4 694 aa11.45□□□□□ -0.58
KPNA1-206ENST00000476916 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
KPNA1-206ENST00000476916 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
KPNA1-206ENST00000476916 HSPA1AP0DMV8 641 aaKnown RBP11.44□□□□□ -0.58
KPNA1-206ENST00000476916 HSPA1BP0DMV9 641 aaKnown RBP11.44□□□□□ -0.58
KPNA1-206ENST00000476916 FOSBP53539 338 aa11.44□□□□□ -0.58
KPNA1-206ENST00000476916 C6orf132Q5T0Z8 1188 aa11.44□□□□□ -0.58
KPNA1-206ENST00000476916 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
KPNA1-206ENST00000476916 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
KPNA1-206ENST00000476916 PDE4DIPQ5VU43 2346 aa11.44□□□□□ -0.58
KPNA1-206ENST00000476916 IGSF3O75054 1194 aa11.43□□□□□ -0.58
KPNA1-206ENST00000476916 CLK2P49760 499 aaKnown RBP11.43□□□□□ -0.58
KPNA1-206ENST00000476916 ZNF428Q96B54 188 aa11.43□□□□□ -0.58
KPNA1-206ENST00000476916 SYCP2Q9BX26 1530 aa11.43□□□□□ -0.58
KPNA1-206ENST00000476916 DCCP43146 1447 aa11.43□□□□□ -0.58
KPNA1-206ENST00000476916 RGS19P49795 217 aa11.42□□□□□ -0.58
KPNA1-206ENST00000476916 DIXDC1Q155Q3 683 aa11.42□□□□□ -0.58
KPNA1-206ENST00000476916 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 ZBTB7AO95365 584 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 APBA3O96018 575 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 RFC5P40937 340 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 HTRA3P83110 453 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 TBC1D2Q9BYX2 928 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 TNRC18O15417 2968 aaPredicted RBP11.41□□□□□ -0.58
KPNA1-206ENST00000476916 LAMC1P11047 1609 aa11.41□□□□□ -0.58
KPNA1-206ENST00000476916 KIF3BO15066 747 aa11.4□□□□□ -0.58
KPNA1-206ENST00000476916 VPS72Q15906 364 aa11.4□□□□□ -0.58
KPNA1-206ENST00000476916 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.58
KPNA1-206ENST00000476916 PDGFDQ9GZP0 370 aaPredicted RBP11.4□□□□□ -0.58
KPNA1-206ENST00000476916 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
KPNA1-206ENST00000476916 USP19O94966 1318 aa11.39□□□□□ -0.59
KPNA1-206ENST00000476916 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
KPNA1-206ENST00000476916 TMEM131LA2VDJ0 1609 aa11.39□□□□□ -0.59
KPNA1-206ENST00000476916 TROQ12816 1431 aaPredicted RBP11.39□□□□□ -0.59
KPNA1-206ENST00000476916 TMEM259Q4ZIN3 620 aa11.39□□□□□ -0.59
KPNA1-206ENST00000476916 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
KPNA1-206ENST00000476916 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
KPNA1-206ENST00000476916 DHX29Q7Z478 1369 aaKnown RBP11.39□□□□□ -0.59
KPNA1-206ENST00000476916 TRIM37O94972 964 aa11.38□□□□□ -0.59
KPNA1-206ENST00000476916 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
KPNA1-206ENST00000476916 WWC1Q8IX03 1113 aa11.38□□□□□ -0.59
KPNA1-206ENST00000476916 ADCY9O60503 1353 aa11.38□□□□□ -0.59
KPNA1-206ENST00000476916 A0A0G2JS52 829 aa11.37□□□□□ -0.59
KPNA1-206ENST00000476916 E9PSI1 815 aa11.37□□□□□ -0.59
KPNA1-206ENST00000476916 MYT1Q01538 1121 aa11.37□□□□□ -0.59
KPNA1-206ENST00000476916 KCNA1Q09470 495 aa11.37□□□□□ -0.59
KPNA1-206ENST00000476916 CROCC2H7BZ55 1655 aa11.36□□□□□ -0.59
KPNA1-206ENST00000476916 PRSS12P56730 875 aa11.36□□□□□ -0.59
KPNA1-206ENST00000476916 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
KPNA1-206ENST00000476916 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
KPNA1-206ENST00000476916 CDK11AQ9UQ88 783 aaPredicted RBP11.36□□□□□ -0.59
KPNA1-206ENST00000476916 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
KPNA1-206ENST00000476916 PIK3C2BO00750 1634 aa11.35□□□□□ -0.59
KPNA1-206ENST00000476916 CFAP65Q6ZU64 1925 aaKnown RBP11.35□□□□□ -0.59
KPNA1-206ENST00000476916 BRD1O95696 1058 aa11.35□□□□□ -0.59
KPNA1-206ENST00000476916 GDPD2Q9HCC8 539 aa11.35□□□□□ -0.59
KPNA1-206ENST00000476916 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
KPNA1-206ENST00000476916 ZNF454Q8N9F8 522 aa11.34□□□□□ -0.59
KPNA1-206ENST00000476916 LIMD1Q9UGP4 676 aa11.34□□□□□ -0.59
KPNA1-206ENST00000476916 ADGRB3O60242 1522 aa11.34□□□□□ -0.59
KPNA1-206ENST00000476916 CLIP1P30622 1438 aa11.34□□□□□ -0.59
KPNA1-206ENST00000476916 MTMR14Q8NCE2 650 aa11.33□□□□□ -0.6
KPNA1-206ENST00000476916 ADAM33Q9BZ11 813 aa11.33□□□□□ -0.6
KPNA1-206ENST00000476916 CDC42BPAQ5VT25 1732 aa11.32□□□□□ -0.6
KPNA1-206ENST00000476916 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
KPNA1-206ENST00000476916 TOMM70O94826 608 aa11.32□□□□□ -0.6
KPNA1-206ENST00000476916 GLMNQ92990 594 aa11.32□□□□□ -0.6
KPNA1-206ENST00000476916 CDCA7LQ96GN5 454 aa11.32□□□□□ -0.6
KPNA1-206ENST00000476916 USTQ9Y2C2 406 aa11.32□□□□□ -0.6
KPNA1-206ENST00000476916 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
KPNA1-206ENST00000476916 SPIRE2Q8WWL2 714 aa11.31□□□□□ -0.6
KPNA1-206ENST00000476916 PBXIP1Q96AQ6 731 aa11.31□□□□□ -0.6
KPNA1-206ENST00000476916 ABHD8Q96I13 439 aa11.31□□□□□ -0.6
KPNA1-206ENST00000476916 ABCC5O15440 1437 aa11.31□□□□□ -0.6
KPNA1-206ENST00000476916 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
KPNA1-206ENST00000476916 SPTLC1O15269 473 aa11.3□□□□□ -0.6
KPNA1-206ENST00000476916 CD46P15529 392 aa11.3□□□□□ -0.6
KPNA1-206ENST00000476916 FAM98CQ17RN3 349 aaKnown RBP11.3□□□□□ -0.6
KPNA1-206ENST00000476916 AMOTL2Q9Y2J4 779 aa11.3□□□□□ -0.6
KPNA1-206ENST00000476916 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 CUL9Q8IWT3 2517 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 DLL1O00548 723 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 PRM3Q9NNZ6 103 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
KPNA1-206ENST00000476916 RCCD1A6NED2 376 aa11.28□□□□□ -0.6
KPNA1-206ENST00000476916 ABL2P42684 1182 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms