RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
VAPB-205ENST00000476395 OFD1O75665 1012 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 NCKAP5LQ9HCH0 1330 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 UQCRHLA0A096LP55 91 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 UQCRHP07919 91 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 MBIPQ9NS73 344 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
VAPB-205ENST00000476395 KIF16BQ96L93 1317 aa10.43□□□□□ -0.74
VAPB-205ENST00000476395 GSPT1P15170 499 aaKnown RBP10.42□□□□□ -0.74
VAPB-205ENST00000476395 NASPP49321 788 aaPredicted RBP10.42□□□□□ -0.74
VAPB-205ENST00000476395 MLECQ14165 292 aa10.42□□□□□ -0.74
VAPB-205ENST00000476395 BMP2KLQ5H9B9 411 aa10.42□□□□□ -0.74
VAPB-205ENST00000476395 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
VAPB-205ENST00000476395 RBM42Q9BTD8 480 aaKnown RBP10.42□□□□□ -0.74
VAPB-205ENST00000476395 C8orf58Q8NAV2 365 aa10.42□□□□□ -0.74
VAPB-205ENST00000476395 BBXQ8WY36 941 aaPredicted RBP10.41□□□□□ -0.74
VAPB-205ENST00000476395 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
VAPB-205ENST00000476395 METP08581 1390 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 AGLP35573 1532 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 FAM177BA6PVY3 158 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 IGSF3O75054 1194 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 TERF2IPQ9NYB0 399 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 MARF1Q9Y4F3 1742 aaKnown RBP10.41□□□□□ -0.74
VAPB-205ENST00000476395 HMOX1P09601 288 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 NFE2L2Q16236 605 aa10.41□□□□□ -0.74
VAPB-205ENST00000476395 ZFP91Q96JP5 570 aaPredicted RBP10.41□□□□□ -0.74
VAPB-205ENST00000476395 AATKQ6ZMQ8 1374 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 FAM83GA6ND36 823 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 TBC1D9Q6ZT07 1266 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 ARHGAP45Q92619 1136 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 EDC4Q6P2E9 1401 aaKnown RBP10.4□□□□□ -0.74
VAPB-205ENST00000476395 MSNP26038 577 aaKnown RBP10.4□□□□□ -0.74
VAPB-205ENST00000476395 MPNDQ8N594 471 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 CHAMP1Q96JM3 812 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 RIMS2Q9UQ26 1411 aa10.4□□□□□ -0.74
VAPB-205ENST00000476395 FMN2Q9NZ56 1722 aa10.4□□□□□ -0.75
VAPB-205ENST00000476395 PLCB2Q00722 1185 aa10.4□□□□□ -0.75
VAPB-205ENST00000476395 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.75
VAPB-205ENST00000476395 NME9Q86XW9 330 aa10.4□□□□□ -0.75
VAPB-205ENST00000476395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.4□□□□□ -0.75
VAPB-205ENST00000476395 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.75
VAPB-205ENST00000476395 SSFA2P28290 1259 aa10.39□□□□□ -0.75
VAPB-205ENST00000476395 HSCBQ8IWL3 235 aa10.39□□□□□ -0.75
VAPB-205ENST00000476395 N4BP2Q86UW6 1770 aaPredicted RBP10.39□□□□□ -0.75
VAPB-205ENST00000476395 TECPR2O15040 1411 aa10.39□□□□□ -0.75
VAPB-205ENST00000476395 IFT57Q9NWB7 429 aa10.38□□□□□ -0.75
VAPB-205ENST00000476395 PRR36Q9H6K5 1346 aa10.38□□□□□ -0.75
VAPB-205ENST00000476395 LRRC37A3O60309 1634 aa10.38□□□□□ -0.75
VAPB-205ENST00000476395 XRN1Q8IZH2 1706 aaKnown RBP10.38□□□□□ -0.75
VAPB-205ENST00000476395 NCLP19338 710 aaKnown RBP10.37□□□□□ -0.75
VAPB-205ENST00000476395 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 KRT24Q2M2I5 525 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 PLEKHM2Q8IWE5 1019 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 GAS2L2Q8NHY3 880 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 UBR1Q8IWV7 1749 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.37□□□□□ -0.75
VAPB-205ENST00000476395 CLEC17AQ6ZS10 378 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 OTUD7AQ8TE49 926 aaPredicted RBP10.37□□□□□ -0.75
VAPB-205ENST00000476395 ZNF428Q96B54 188 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 PPP1R9BQ96SB3 815 aa10.37□□□□□ -0.75
VAPB-205ENST00000476395 C16orf71Q8IYS4 520 aaPredicted RBP10.36□□□□□ -0.75
VAPB-205ENST00000476395 FAM208AQ9UK61 1670 aaKnown RBP10.36□□□□□ -0.75
VAPB-205ENST00000476395 ELL2O00472 640 aaPredicted RBP10.36□□□□□ -0.75
VAPB-205ENST00000476395 ZSCAN20P17040 1043 aaPredicted RBP10.36□□□□□ -0.75
VAPB-205ENST00000476395 ANKRD45Q5TZF3 282 aa10.36□□□□□ -0.75
VAPB-205ENST00000476395 HDGFL2Q7Z4V5 671 aaPredicted RBP10.36□□□□□ -0.75
VAPB-205ENST00000476395 GCC1Q96CN9 775 aa10.36□□□□□ -0.75
VAPB-205ENST00000476395 CRB1P82279 1406 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 GTF2E1P29083 439 aaPredicted RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 RRS1Q15050 365 aaKnown RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 OVOS2A0A0J9YW53 1432 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 OVOS2Q6IE36 1432 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 HSP90AB1P08238 724 aaKnown RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 CBX1P83916 185 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 AEBP1Q8IUX7 1158 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 CNPY4Q8N129 248 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 RBSNQ9H1K0 784 aa10.35□□□□□ -0.75
VAPB-205ENST00000476395 CYP2E1P05181 493 aaPredicted RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 SMAP1Q8IYB5 467 aaPredicted RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 DDX49Q9Y6V7 483 aaKnown RBP10.35□□□□□ -0.75
VAPB-205ENST00000476395 RGPD8O14715 1765 aaPredicted RBP10.34□□□□□ -0.75
VAPB-205ENST00000476395 KIF24Q5T7B8 1368 aa10.34□□□□□ -0.75
VAPB-205ENST00000476395 WASLO00401 505 aaPredicted RBP10.34□□□□□ -0.75
VAPB-205ENST00000476395 ZBTB22O15209 634 aa10.34□□□□□ -0.75
VAPB-205ENST00000476395 HMGB1P09429 215 aaKnown RBP10.34□□□□□ -0.75
VAPB-205ENST00000476395 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
VAPB-205ENST00000476395 CAVIN1Q6NZI2 390 aaKnown RBP10.34□□□□□ -0.75
VAPB-205ENST00000476395 IPO4Q8TEX9 1081 aaKnown RBP10.34□□□□□ -0.75
VAPB-205ENST00000476395 SSH2Q76I76 1423 aa10.34□□□□□ -0.75
VAPB-205ENST00000476395 DCTPP1Q9H773 170 aa10.34□□□□□ -0.75
VAPB-205ENST00000476395 PKP1Q13835 747 aa10.34□□□□□ -0.75
VAPB-205ENST00000476395 VGLL3A8MV65 326 aa10.33□□□□□ -0.76
VAPB-205ENST00000476395 INTS3Q68E01 1043 aaKnown RBP10.33□□□□□ -0.76
VAPB-205ENST00000476395 MSH6P52701 1360 aa10.33□□□□□ -0.76
VAPB-205ENST00000476395 MAPK8IP2Q13387 824 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms