RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ANKRD45Q5TZF3 282 aa20.95■□□□□ 0.94
TVP23B-202ENST00000476139 CHD1LQ86WJ1 897 aa20.95■□□□□ 0.94
TVP23B-202ENST00000476139 PHF8Q9UPP1 1060 aa20.95■□□□□ 0.94
TVP23B-202ENST00000476139 KDRP35968 1356 aa20.95■□□□□ 0.94
TVP23B-202ENST00000476139 RIMS1Q86UR5 1692 aaKnown RBP20.95■□□□□ 0.94
TVP23B-202ENST00000476139 TBC1D32Q96NH3 1257 aa20.94■□□□□ 0.94
TVP23B-202ENST00000476139 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
TVP23B-202ENST00000476139 ESCO1Q5FWF5 840 aa20.93■□□□□ 0.94
TVP23B-202ENST00000476139 SLKQ9H2G2 1235 aaPredicted RBP20.93■□□□□ 0.94
TVP23B-202ENST00000476139 TSPYL4Q9UJ04 414 aa20.93■□□□□ 0.94
TVP23B-202ENST00000476139 SLC4A2P04920 1241 aa20.93■□□□□ 0.94
TVP23B-202ENST00000476139 PLEKHG5O94827 1062 aa20.92■□□□□ 0.94
TVP23B-202ENST00000476139 USHBP1Q8N6Y0 703 aa20.92■□□□□ 0.94
TVP23B-202ENST00000476139 IL27Q8NEV9 243 aa20.91■□□□□ 0.94
TVP23B-202ENST00000476139 CHMP4BQ9H444 224 aaKnown RBP20.91■□□□□ 0.94
TVP23B-202ENST00000476139 MFAP1P55081 439 aaKnown RBP20.91■□□□□ 0.94
TVP23B-202ENST00000476139 KIAA0232Q92628 1395 aa20.9■□□□□ 0.94
TVP23B-202ENST00000476139 RTN4Q9NQC3 1192 aaKnown RBP20.9■□□□□ 0.94
TVP23B-202ENST00000476139 PSME1Q06323 249 aa20.89■□□□□ 0.94
TVP23B-202ENST00000476139 INTS3Q68E01 1043 aaKnown RBP20.89■□□□□ 0.94
TVP23B-202ENST00000476139 SPRYD3Q8NCJ5 442 aa20.89■□□□□ 0.94
TVP23B-202ENST00000476139 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.94
TVP23B-202ENST00000476139 GCC1Q96CN9 775 aa20.89■□□□□ 0.93
TVP23B-202ENST00000476139 FMN2Q9NZ56 1722 aa20.89■□□□□ 0.93
TVP23B-202ENST00000476139 G2E3Q7L622 706 aa20.88■□□□□ 0.93
TVP23B-202ENST00000476139 ZBTB7CA1YPR0 619 aa20.88■□□□□ 0.93
TVP23B-202ENST00000476139 XPCQ01831 940 aaPredicted RBP20.88■□□□□ 0.93
TVP23B-202ENST00000476139 RGS12O14924 1447 aa20.88■□□□□ 0.93
TVP23B-202ENST00000476139 HAP1P54257 671 aaPredicted RBP20.87■□□□□ 0.93
TVP23B-202ENST00000476139 GSE1Q14687 1217 aa20.87■□□□□ 0.93
TVP23B-202ENST00000476139 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
TVP23B-202ENST00000476139 ORAI2Q96SN7 254 aa20.87■□□□□ 0.93
TVP23B-202ENST00000476139 GNAT3A8MTJ3 354 aa20.86■□□□□ 0.93
TVP23B-202ENST00000476139 F6X3S4 739 aa20.86■□□□□ 0.93
TVP23B-202ENST00000476139 NECTIN2Q92692 538 aa20.85■□□□□ 0.93
TVP23B-202ENST00000476139 C22orf23Q9BZE7 217 aa20.85■□□□□ 0.93
TVP23B-202ENST00000476139 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
TVP23B-202ENST00000476139 MARF1Q9Y4F3 1742 aaKnown RBP20.84■□□□□ 0.93
TVP23B-202ENST00000476139 MEIS3Q99687 375 aa20.84■□□□□ 0.93
TVP23B-202ENST00000476139 SLC4A10Q6U841 1118 aa20.84■□□□□ 0.93
TVP23B-202ENST00000476139 NBPF6Q5VWK0 638 aa20.83■□□□□ 0.92
TVP23B-202ENST00000476139 NBPF4Q96M43 638 aa20.83■□□□□ 0.92
TVP23B-202ENST00000476139 TBC1D2Q9BYX2 928 aa20.83■□□□□ 0.92
TVP23B-202ENST00000476139 PTPRCP08575 1304 aa20.83■□□□□ 0.92
TVP23B-202ENST00000476139 BECN1Q14457 450 aa20.82■□□□□ 0.92
TVP23B-202ENST00000476139 MSH6P52701 1360 aa20.82■□□□□ 0.92
TVP23B-202ENST00000476139 NWD1Q149M9 1564 aa20.82■□□□□ 0.92
TVP23B-202ENST00000476139 KIF24Q5T7B8 1368 aa20.81■□□□□ 0.92
TVP23B-202ENST00000476139 IP6K1Q92551 441 aa20.81■□□□□ 0.92
TVP23B-202ENST00000476139 C16orf71Q8IYS4 520 aaPredicted RBP20.81■□□□□ 0.92
TVP23B-202ENST00000476139 DCTPP1Q9H773 170 aa20.81■□□□□ 0.92
TVP23B-202ENST00000476139 HTATSF1O43719 755 aaKnown RBP20.8■□□□□ 0.92
TVP23B-202ENST00000476139 BMP2KLQ5H9B9 411 aa20.8■□□□□ 0.92
TVP23B-202ENST00000476139 LMOD2Q6P5Q4 547 aa20.8■□□□□ 0.92
TVP23B-202ENST00000476139 CEP85Q6P2H3 762 aa20.79■□□□□ 0.92
TVP23B-202ENST00000476139 ADGRL3Q9HAR2 1447 aa20.79■□□□□ 0.92
TVP23B-202ENST00000476139 APBB1O00213 710 aa20.79■□□□□ 0.92
TVP23B-202ENST00000476139 ANKRD44Q8N8A2 993 aa20.79■□□□□ 0.92
TVP23B-202ENST00000476139 LRRC59Q96AG4 307 aaKnown RBP20.79■□□□□ 0.92
TVP23B-202ENST00000476139 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
TVP23B-202ENST00000476139 SETD1BQ9UPS6 1966 aaKnown RBP20.79■□□□□ 0.92
TVP23B-202ENST00000476139 NPHP4O75161 1426 aaPredicted RBP20.78■□□□□ 0.92
TVP23B-202ENST00000476139 RTL1A6NKG5 1358 aa20.78■□□□□ 0.92
TVP23B-202ENST00000476139 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
TVP23B-202ENST00000476139 TAF7Q15545 349 aaPredicted RBP20.77■□□□□ 0.92
TVP23B-202ENST00000476139 ATP10DQ9P241 1426 aa20.77■□□□□ 0.92
TVP23B-202ENST00000476139 STK31Q9BXU1 1019 aa20.76■□□□□ 0.91
TVP23B-202ENST00000476139 LGR6Q9HBX8 967 aa20.76■□□□□ 0.91
TVP23B-202ENST00000476139 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
TVP23B-202ENST00000476139 RPAP2Q8IXW5 612 aaPredicted RBP20.76■□□□□ 0.91
TVP23B-202ENST00000476139 GCP02774 474 aa20.76■□□□□ 0.91
TVP23B-202ENST00000476139 OTUD7AQ8TE49 926 aaPredicted RBP20.76■□□□□ 0.91
TVP23B-202ENST00000476139 PLEKHM2Q8IWE5 1019 aa20.75■□□□□ 0.91
TVP23B-202ENST00000476139 ZNF142P52746 1687 aaPredicted RBP20.75■□□□□ 0.91
TVP23B-202ENST00000476139 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
TVP23B-202ENST00000476139 FLIIQ13045 1269 aa20.74■□□□□ 0.91
TVP23B-202ENST00000476139 FKBP5Q13451 457 aaPredicted RBP20.74■□□□□ 0.91
TVP23B-202ENST00000476139 KCNH5Q8NCM2 988 aa20.74■□□□□ 0.91
TVP23B-202ENST00000476139 GSPT1P15170 499 aaKnown RBP20.74■□□□□ 0.91
TVP23B-202ENST00000476139 CCDC30Q5VVM6 783 aa20.74■□□□□ 0.91
TVP23B-202ENST00000476139 TBC1D9Q6ZT07 1266 aa20.74■□□□□ 0.91
TVP23B-202ENST00000476139 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
TVP23B-202ENST00000476139 ANTXR1Q9H6X2 564 aa20.73■□□□□ 0.91
TVP23B-202ENST00000476139 NFAT5O94916 1531 aa20.72■□□□□ 0.91
TVP23B-202ENST00000476139 LTN1O94822 1766 aa20.72■□□□□ 0.91
TVP23B-202ENST00000476139 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
TVP23B-202ENST00000476139 USP54Q70EL1 1684 aa20.71■□□□□ 0.91
TVP23B-202ENST00000476139 AXIN2Q9Y2T1 843 aa20.7■□□□□ 0.9
TVP23B-202ENST00000476139 ARHGEF25Q86VW2 580 aa20.7■□□□□ 0.9
TVP23B-202ENST00000476139 KCNQ3O43525 872 aa20.7■□□□□ 0.9
TVP23B-202ENST00000476139 RBM25P49756 843 aaKnown RBP20.7■□□□□ 0.9
TVP23B-202ENST00000476139 PHAXQ9H814 394 aaKnown RBP20.7■□□□□ 0.9
TVP23B-202ENST00000476139 EIF2S2P20042 333 aaKnown RBP20.69■□□□□ 0.9
TVP23B-202ENST00000476139 MPRIPQ6WCQ1 1025 aa20.69■□□□□ 0.9
TVP23B-202ENST00000476139 KRT28Q7Z3Y7 464 aa20.68■□□□□ 0.9
TVP23B-202ENST00000476139 ARXQ96QS3 562 aa20.68■□□□□ 0.9
TVP23B-202ENST00000476139 HDGFL1Q5TGJ6 251 aa20.67■□□□□ 0.9
TVP23B-202ENST00000476139 DDX17Q92841 729 aaKnown RBP20.67■□□□□ 0.9
TVP23B-202ENST00000476139 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
TVP23B-202ENST00000476139 LRRC37A3O60309 1634 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms