RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
SSPO-205ENST00000475488 MBD3O95983 291 aa16.71■□□□□ 0.26
SSPO-205ENST00000475488 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.26
SSPO-205ENST00000475488 CAVIN4Q5BKX8 364 aa16.71■□□□□ 0.26
SSPO-205ENST00000475488 CEP63Q96MT8 703 aa16.71■□□□□ 0.26
SSPO-205ENST00000475488 UBA5Q9GZZ9 404 aa16.71■□□□□ 0.26
SSPO-205ENST00000475488 CCDC192P0DO97 292 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 TSG101Q99816 390 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 PRDM11Q9NQV5 511 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 ZNF530Q6P9A1 599 aaPredicted RBP16.7■□□□□ 0.26
SSPO-205ENST00000475488 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 AACSQ86V21 672 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 CCDC113Q9H0I3 377 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 LIG1P18858 919 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
SSPO-205ENST00000475488 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
SSPO-205ENST00000475488 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
SSPO-205ENST00000475488 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
SSPO-205ENST00000475488 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
SSPO-205ENST00000475488 ERLIN1O75477 346 aa16.69■□□□□ 0.26
SSPO-205ENST00000475488 CTNNA3Q9UI47 895 aa16.69■□□□□ 0.26
SSPO-205ENST00000475488 TWISTNBQ3B726 338 aaPredicted RBP16.69■□□□□ 0.26
SSPO-205ENST00000475488 IDH1O75874 414 aaKnown RBP16.69■□□□□ 0.26
SSPO-205ENST00000475488 CTNNBL1Q8WYA6 563 aaPredicted RBP16.69■□□□□ 0.26
SSPO-205ENST00000475488 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
SSPO-205ENST00000475488 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
SSPO-205ENST00000475488 DZIP1Q86YF9 867 aaKnown RBP16.69■□□□□ 0.26
SSPO-205ENST00000475488 AAMPQ13685 434 aa16.68■□□□□ 0.26
SSPO-205ENST00000475488 THEMISQ8N1K5 641 aaPredicted RBP16.68■□□□□ 0.26
SSPO-205ENST00000475488 AIDAQ96BJ3 306 aa16.68■□□□□ 0.26
SSPO-205ENST00000475488 GIGYF2Q6Y7W6 1299 aaKnown RBP16.68■□□□□ 0.26
SSPO-205ENST00000475488 CCDC85AQ96PX6 553 aaPredicted RBP16.68■□□□□ 0.26
SSPO-205ENST00000475488 DDX23Q9BUQ8 820 aaKnown RBP16.68■□□□□ 0.26
SSPO-205ENST00000475488 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
SSPO-205ENST00000475488 CCDC148Q8NFR7 591 aa16.67■□□□□ 0.26
SSPO-205ENST00000475488 PRKAR2BP31323 418 aa16.67■□□□□ 0.26
SSPO-205ENST00000475488 MAP3K9P80192 1104 aa16.67■□□□□ 0.26
SSPO-205ENST00000475488 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
SSPO-205ENST00000475488 NOB1Q9ULX3 412 aaKnown RBP16.67■□□□□ 0.26
SSPO-205ENST00000475488 CEP126Q9P2H0 1117 aa16.67■□□□□ 0.26
SSPO-205ENST00000475488 CTNNA2P26232 953 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 MTERF4Q7Z6M4 381 aaKnown RBP16.66■□□□□ 0.26
SSPO-205ENST00000475488 HOOK3Q86VS8 718 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 FEZ1Q99689 392 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 MINDY4BA8MYZ0 360 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 TTC16Q8NEE8 873 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 GRM1Q13255 1194 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 IMMTQ16891 758 aaKnown RBP16.66■□□□□ 0.26
SSPO-205ENST00000475488 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
SSPO-205ENST00000475488 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
SSPO-205ENST00000475488 VTI1AQ96AJ9 217 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 KRT85P78386 507 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
SSPO-205ENST00000475488 CFAP45Q9UL16 551 aa16.66■□□□□ 0.26
SSPO-205ENST00000475488 PRAM1Q96QH2 718 aa16.65■□□□□ 0.26
SSPO-205ENST00000475488 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
SSPO-205ENST00000475488 GSTTP1A0A1W2PQM5 241 aa16.65■□□□□ 0.26
SSPO-205ENST00000475488 SULT6B1Q6IMI4 303 aa16.65■□□□□ 0.26
SSPO-205ENST00000475488 CUX1P39880 1505 aa16.65■□□□□ 0.26
SSPO-205ENST00000475488 CCDC178Q5BJE1 867 aa16.65■□□□□ 0.26
SSPO-205ENST00000475488 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
SSPO-205ENST00000475488 ZNF444Q8N0Y2 327 aaPredicted RBP16.64■□□□□ 0.25
SSPO-205ENST00000475488 SPA17Q15506 151 aa16.64■□□□□ 0.25
SSPO-205ENST00000475488 CACNA2D4Q7Z3S7 1137 aa16.64■□□□□ 0.25
SSPO-205ENST00000475488 SMTNL1A8MU46 457 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 MRE11P49959 708 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 ANKLE2Q86XL3 938 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 CDK19Q9BWU1 502 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 ZNF354CQ86Y25 554 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 VPS36Q86VN1 386 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 SPATA32Q96LK8 384 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 FKBP15Q5T1M5 1219 aa16.63■□□□□ 0.25
SSPO-205ENST00000475488 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
SSPO-205ENST00000475488 MACROD2A1Z1Q3 448 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 ANKRD18BA2A2Z9 1011 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 TRAK2O60296 914 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 UBE4AQ14139 1066 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
SSPO-205ENST00000475488 FGFR1OPO95684 399 aaKnown RBP16.62■□□□□ 0.25
SSPO-205ENST00000475488 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 TMOD3Q9NYL9 352 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 LMAN1P49257 510 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 FERMT1Q9BQL6 677 aa16.62■□□□□ 0.25
SSPO-205ENST00000475488 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
SSPO-205ENST00000475488 FERP16591 822 aa16.61■□□□□ 0.25
SSPO-205ENST00000475488 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
SSPO-205ENST00000475488 CCDC102AQ96A19 550 aa16.61■□□□□ 0.25
SSPO-205ENST00000475488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSPO-205ENST00000475488 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
SSPO-205ENST00000475488 TSNARE1Q96NA8 513 aa16.61■□□□□ 0.25
SSPO-205ENST00000475488 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
SSPO-205ENST00000475488 RAB34Q9BZG1 259 aa16.6■□□□□ 0.25
SSPO-205ENST00000475488 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
SSPO-205ENST00000475488 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
SSPO-205ENST00000475488 JAKMIP1Q96N16 626 aaKnown RBP16.6■□□□□ 0.25
SSPO-205ENST00000475488 GCOM1H8Y6P7 765 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms