RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 PSME1Q06323 249 aa18.05■□□□□ 0.48
NELFCD-204ENST00000474543 ARHGAP45Q92619 1136 aa18.05■□□□□ 0.48
NELFCD-204ENST00000474543 FSD2A1L4K1 749 aa18.05■□□□□ 0.48
NELFCD-204ENST00000474543 HMOX1P09601 288 aa18.05■□□□□ 0.48
NELFCD-204ENST00000474543 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
NELFCD-204ENST00000474543 SNX21Q969T3 373 aa18.05■□□□□ 0.48
NELFCD-204ENST00000474543 THUMPD2Q9BTF0 503 aaKnown RBP18.05■□□□□ 0.48
NELFCD-204ENST00000474543 DDIT3P35638 169 aa18.04■□□□□ 0.48
NELFCD-204ENST00000474543 SOS2Q07890 1332 aaPredicted RBP18.04■□□□□ 0.48
NELFCD-204ENST00000474543 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
NELFCD-204ENST00000474543 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 TSPYL6Q8N831 410 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 LRRC59Q96AG4 307 aaKnown RBP18.03■□□□□ 0.48
NELFCD-204ENST00000474543 GCC1Q96CN9 775 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 TRAK2O60296 914 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
NELFCD-204ENST00000474543 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 CHMP4BQ9H444 224 aaKnown RBP18.03■□□□□ 0.48
NELFCD-204ENST00000474543 TOPAZ1Q8N9V7 1692 aa18.03■□□□□ 0.48
NELFCD-204ENST00000474543 GOLGA6L3A6NEY3 463 aa18.02■□□□□ 0.48
NELFCD-204ENST00000474543 XRCC6P12956 609 aaKnown RBP eCLIP18.02■□□□□ 0.48
NELFCD-204ENST00000474543 GNAI1P63096 354 aa18.02■□□□□ 0.48
NELFCD-204ENST00000474543 IFT57Q9NWB7 429 aa18.02■□□□□ 0.48
NELFCD-204ENST00000474543 ACEP12821 1306 aa18.02■□□□□ 0.48
NELFCD-204ENST00000474543 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
NELFCD-204ENST00000474543 GZF1Q9H116 711 aaPredicted RBP18.01■□□□□ 0.47
NELFCD-204ENST00000474543 C1orf115Q9H7X2 142 aa18.01■□□□□ 0.47
NELFCD-204ENST00000474543 EMILIN1Q9Y6C2 1016 aa18.01■□□□□ 0.47
NELFCD-204ENST00000474543 IL13P35225 146 aa18.01■□□□□ 0.47
NELFCD-204ENST00000474543 PXDNQ92626 1479 aa18■□□□□ 0.47
NELFCD-204ENST00000474543 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
NELFCD-204ENST00000474543 SIRT2Q8IXJ6 389 aa18■□□□□ 0.47
NELFCD-204ENST00000474543 MBIPQ9NS73 344 aa18■□□□□ 0.47
NELFCD-204ENST00000474543 KIF2CQ99661 725 aa17.99■□□□□ 0.47
NELFCD-204ENST00000474543 ABCC4O15439 1325 aa17.99■□□□□ 0.47
NELFCD-204ENST00000474543 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
NELFCD-204ENST00000474543 ARXQ96QS3 562 aa17.99■□□□□ 0.47
NELFCD-204ENST00000474543 JCADQ9P266 1359 aa17.99■□□□□ 0.47
NELFCD-204ENST00000474543 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
NELFCD-204ENST00000474543 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
NELFCD-204ENST00000474543 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
NELFCD-204ENST00000474543 LMOD2Q6P5Q4 547 aa17.98■□□□□ 0.47
NELFCD-204ENST00000474543 EDC4Q6P2E9 1401 aaKnown RBP17.97■□□□□ 0.47
NELFCD-204ENST00000474543 TWISTNBQ3B726 338 aaPredicted RBP17.97■□□□□ 0.47
NELFCD-204ENST00000474543 NME9Q86XW9 330 aa17.97■□□□□ 0.47
NELFCD-204ENST00000474543 RRAGDQ9NQL2 400 aaPredicted RBP17.97■□□□□ 0.47
NELFCD-204ENST00000474543 TBC1D9Q6ZT07 1266 aa17.96■□□□□ 0.47
NELFCD-204ENST00000474543 C8orf58Q8NAV2 365 aa17.96■□□□□ 0.47
NELFCD-204ENST00000474543 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
NELFCD-204ENST00000474543 ZRANB1Q9UGI0 708 aa17.96■□□□□ 0.47
NELFCD-204ENST00000474543 CIZ1Q9ULV3 898 aaPredicted RBP17.96■□□□□ 0.47
NELFCD-204ENST00000474543 AATKQ6ZMQ8 1374 aa17.95■□□□□ 0.46
NELFCD-204ENST00000474543 SPATA31A3Q5VYP0 1347 aa17.95■□□□□ 0.46
NELFCD-204ENST00000474543 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
NELFCD-204ENST00000474543 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
NELFCD-204ENST00000474543 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
NELFCD-204ENST00000474543 SBNO1A3KN83 1393 aa17.94■□□□□ 0.46
NELFCD-204ENST00000474543 CD2BP2O95400 341 aaKnown RBP17.93■□□□□ 0.46
NELFCD-204ENST00000474543 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
NELFCD-204ENST00000474543 API5Q9BZZ5 524 aaKnown RBP17.93■□□□□ 0.46
NELFCD-204ENST00000474543 TNS3Q68CZ2 1445 aa17.93■□□□□ 0.46
NELFCD-204ENST00000474543 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
NELFCD-204ENST00000474543 RAB3GAP1Q15042 981 aa17.93■□□□□ 0.46
NELFCD-204ENST00000474543 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
NELFCD-204ENST00000474543 NUTM2BA6NNL0 878 aaPredicted RBP17.92■□□□□ 0.46
NELFCD-204ENST00000474543 NUTM2EB1AL46 878 aaPredicted RBP17.92■□□□□ 0.46
NELFCD-204ENST00000474543 NUTM2AQ8IVF1 878 aaPredicted RBP17.92■□□□□ 0.46
NELFCD-204ENST00000474543 TRPM3Q9HCF6 1732 aaPredicted RBP17.92■□□□□ 0.46
NELFCD-204ENST00000474543 MRE11P49959 708 aa17.91■□□□□ 0.46
NELFCD-204ENST00000474543 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
NELFCD-204ENST00000474543 USP6P35125 1406 aa17.91■□□□□ 0.46
NELFCD-204ENST00000474543 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
NELFCD-204ENST00000474543 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
NELFCD-204ENST00000474543 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
NELFCD-204ENST00000474543 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
NELFCD-204ENST00000474543 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
NELFCD-204ENST00000474543 K7ELQ4 463 aaPredicted RBP17.9■□□□□ 0.46
NELFCD-204ENST00000474543 COG3Q96JB2 828 aa17.9■□□□□ 0.46
NELFCD-204ENST00000474543 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
NELFCD-204ENST00000474543 CDC45O75419 566 aa17.89■□□□□ 0.46
NELFCD-204ENST00000474543 DCTN1Q14203 1278 aa17.89■□□□□ 0.46
NELFCD-204ENST00000474543 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
NELFCD-204ENST00000474543 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
NELFCD-204ENST00000474543 ABTB2Q8N961 1025 aa17.89■□□□□ 0.45
NELFCD-204ENST00000474543 GBP4Q96PP9 640 aa17.89■□□□□ 0.45
NELFCD-204ENST00000474543 DCTPP1Q9H773 170 aa17.89■□□□□ 0.45
NELFCD-204ENST00000474543 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
NELFCD-204ENST00000474543 GRPEL1Q9HAV7 217 aa17.88■□□□□ 0.45
NELFCD-204ENST00000474543 HSP90AA1P07900 732 aaKnown RBP17.88■□□□□ 0.45
NELFCD-204ENST00000474543 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
NELFCD-204ENST00000474543 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
NELFCD-204ENST00000474543 HAP1P54257 671 aaPredicted RBP17.87■□□□□ 0.45
NELFCD-204ENST00000474543 ALS2Q96Q42 1657 aa17.87■□□□□ 0.45
NELFCD-204ENST00000474543 TTC21BQ7Z4L5 1316 aa17.87■□□□□ 0.45
NELFCD-204ENST00000474543 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
NELFCD-204ENST00000474543 CABLES1Q8TDN4 633 aa17.86■□□□□ 0.45
NELFCD-204ENST00000474543 COL22A1Q8NFW1 1626 aaPredicted RBP17.86■□□□□ 0.45
NELFCD-204ENST00000474543 EIF5BO60841 1220 aaKnown RBP17.86■□□□□ 0.45
NELFCD-204ENST00000474543 MEX3CQ5U5Q3 659 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms