RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 KDM4AO75164 1064 aa11.12□□□□□ -0.63
PKNOX1-205ENST00000474336 WNT7BP56706 349 aa11.12□□□□□ -0.63
PKNOX1-205ENST00000474336 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
PKNOX1-205ENST00000474336 IQGAP3Q86VI3 1631 aa11.11□□□□□ -0.63
PKNOX1-205ENST00000474336 A2MP01023 1474 aa11.11□□□□□ -0.63
PKNOX1-205ENST00000474336 SKOR1P84550 965 aa11.1□□□□□ -0.63
PKNOX1-205ENST00000474336 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
PKNOX1-205ENST00000474336 KDM5DQ9BY66 1539 aa11.09□□□□□ -0.63
PKNOX1-205ENST00000474336 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
PKNOX1-205ENST00000474336 BCORL1Q5H9F3 1711 aa11.09□□□□□ -0.63
PKNOX1-205ENST00000474336 HRCP23327 699 aa11.09□□□□□ -0.63
PKNOX1-205ENST00000474336 GPIHBP1Q8IV16 184 aa11.09□□□□□ -0.63
PKNOX1-205ENST00000474336 YEATS2Q9ULM3 1422 aa11.09□□□□□ -0.63
PKNOX1-205ENST00000474336 USP46P62068 366 aa11.08□□□□□ -0.64
PKNOX1-205ENST00000474336 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-205ENST00000474336 PZPP20742 1482 aa11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 MAGI2Q86UL8 1455 aa11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 FAM181BA6NEQ2 426 aa11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 FAM135AQ9P2D6 1515 aa11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 TET3O43151 1660 aa11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 CFAP65Q6ZU64 1925 aaKnown RBP11.07□□□□□ -0.64
PKNOX1-205ENST00000474336 COL17A1Q9UMD9 1497 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 MROH1Q8NDA8 1641 aa11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 NUP155O75694 1391 aa11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 PRDM15P57071 1507 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 ZC3H13Q5T200 1668 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 NXF1Q9UBU9 619 aaKnown RBP11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
PKNOX1-205ENST00000474336 DHX29Q7Z478 1369 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-205ENST00000474336 E9PCH4 1651 aa11.05□□□□□ -0.64
PKNOX1-205ENST00000474336 SPHKAPQ2M3C7 1700 aa11.05□□□□□ -0.64
PKNOX1-205ENST00000474336 REREQ9P2R6 1566 aa11.05□□□□□ -0.64
PKNOX1-205ENST00000474336 KIF3BO15066 747 aa11.04□□□□□ -0.64
PKNOX1-205ENST00000474336 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-205ENST00000474336 HLA-CQ95604 372 aa11.04□□□□□ -0.64
PKNOX1-205ENST00000474336 CAMSAP1Q5T5Y3 1602 aa11.04□□□□□ -0.64
PKNOX1-205ENST00000474336 KANK1Q14678 1352 aa11.03□□□□□ -0.64
PKNOX1-205ENST00000474336 MPHOSPH9Q99550 1183 aa11.03□□□□□ -0.64
PKNOX1-205ENST00000474336 ATP10AO60312 1499 aa11.03□□□□□ -0.64
PKNOX1-205ENST00000474336 CLTCQ00610 1675 aaKnown RBP11.02□□□□□ -0.64
PKNOX1-205ENST00000474336 HOXA2O43364 376 aa11.02□□□□□ -0.65
PKNOX1-205ENST00000474336 JUNDP17535 347 aa11.02□□□□□ -0.65
PKNOX1-205ENST00000474336 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
PKNOX1-205ENST00000474336 CLSPNQ9HAW4 1339 aa11.02□□□□□ -0.65
PKNOX1-205ENST00000474336 SIAH2O43255 324 aa11.01□□□□□ -0.65
PKNOX1-205ENST00000474336 VWDEQ8N2E2 1590 aa11□□□□□ -0.65
PKNOX1-205ENST00000474336 MAP2K5Q13163 448 aa11□□□□□ -0.65
PKNOX1-205ENST00000474336 IRF7Q92985 503 aa11□□□□□ -0.65
PKNOX1-205ENST00000474336 FER1L4A9Z1Z3 1794 aa11□□□□□ -0.65
PKNOX1-205ENST00000474336 EFCAB6Q5THR3 1501 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 CAPN5O15484 640 aaPredicted RBP10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 GMPRP36959 345 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 GGT6Q6P531 493 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 TRIM46Q7Z4K8 759 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 EHBP1Q8NDI1 1231 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 WASF2Q9Y6W5 498 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 AGLP35573 1532 aa10.99□□□□□ -0.65
PKNOX1-205ENST00000474336 BMP1P13497 986 aa10.98□□□□□ -0.65
PKNOX1-205ENST00000474336 MDM2Q00987 491 aaPredicted RBP10.98□□□□□ -0.65
PKNOX1-205ENST00000474336 ZSCAN1Q8NBB4 408 aa10.98□□□□□ -0.65
PKNOX1-205ENST00000474336 ABCC3O15438 1527 aa10.98□□□□□ -0.65
PKNOX1-205ENST00000474336 KIF1BO60333 1816 aa10.98□□□□□ -0.65
PKNOX1-205ENST00000474336 IRF6O14896 467 aa10.97□□□□□ -0.65
PKNOX1-205ENST00000474336 PTCRAQ6ISU1 281 aaPredicted RBP10.97□□□□□ -0.65
PKNOX1-205ENST00000474336 NUDT12Q9BQG2 462 aa10.97□□□□□ -0.65
PKNOX1-205ENST00000474336 ARID4BQ4LE39 1312 aaPredicted RBP10.96□□□□□ -0.65
PKNOX1-205ENST00000474336 GUCA2AQ02747 115 aa10.96□□□□□ -0.65
PKNOX1-205ENST00000474336 SYMPKQ92797 1274 aaKnown RBP10.96□□□□□ -0.65
PKNOX1-205ENST00000474336 SIN3AQ96ST3 1273 aa10.96□□□□□ -0.65
PKNOX1-205ENST00000474336 PREX1Q8TCU6 1659 aa10.95□□□□□ -0.66
PKNOX1-205ENST00000474336 LMTK2Q8IWU2 1503 aa10.95□□□□□ -0.66
PKNOX1-205ENST00000474336 TONSLQ96HA7 1378 aa10.95□□□□□ -0.66
PKNOX1-205ENST00000474336 LORP23490 312 aaPredicted RBP10.95□□□□□ -0.66
PKNOX1-205ENST00000474336 MLECQ14165 292 aa10.95□□□□□ -0.66
PKNOX1-205ENST00000474336 H3BM21 787 aa10.94□□□□□ -0.66
PKNOX1-205ENST00000474336 RETREG3Q86VR2 466 aa10.94□□□□□ -0.66
PKNOX1-205ENST00000474336 CLTCL1P53675 1640 aa10.94□□□□□ -0.66
PKNOX1-205ENST00000474336 TRPM2O94759 1503 aa10.94□□□□□ -0.66
PKNOX1-205ENST00000474336 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
PKNOX1-205ENST00000474336 MROH2AA6NES4 1674 aa10.93□□□□□ -0.66
PKNOX1-205ENST00000474336 CCDC144AA2RUR9 1427 aa10.92□□□□□ -0.66
PKNOX1-205ENST00000474336 ANKRD30BQ9BXX2 1392 aa10.92□□□□□ -0.66
PKNOX1-205ENST00000474336 MINK1Q8N4C8 1332 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-205ENST00000474336 VEGFBP49765 207 aa10.92□□□□□ -0.66
PKNOX1-205ENST00000474336 MYO5BQ9ULV0 1848 aa10.92□□□□□ -0.66
PKNOX1-205ENST00000474336 RPRD2Q5VT52 1461 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-205ENST00000474336 SH3BP2P78314 561 aa10.91□□□□□ -0.66
PKNOX1-205ENST00000474336 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-205ENST00000474336 RIMS1Q86UR5 1692 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-205ENST00000474336 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
PKNOX1-205ENST00000474336 UGGT1Q9NYU2 1555 aa10.9□□□□□ -0.67
PKNOX1-205ENST00000474336 C3P01024 1663 aa10.89□□□□□ -0.67
PKNOX1-205ENST00000474336 MADDQ8WXG6 1647 aa10.89□□□□□ -0.67
PKNOX1-205ENST00000474336 ZFP42Q96MM3 310 aa10.89□□□□□ -0.67
PKNOX1-205ENST00000474336 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
PKNOX1-205ENST00000474336 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
PKNOX1-205ENST00000474336 NPATQ14207 1427 aa10.89□□□□□ -0.67
PKNOX1-205ENST00000474336 ERBB4Q15303 1308 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms