RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 SLC16A10Q8TF71 515 aa17.92■□□□□ 0.46
SHROOM3-204ENST00000473602 NHSQ6T4R5 1651 aa17.91■□□□□ 0.46
SHROOM3-204ENST00000473602 POLD1P28340 1107 aa17.91■□□□□ 0.46
SHROOM3-204ENST00000473602 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
SHROOM3-204ENST00000473602 ANKRD26Q9UPS8 1709 aa17.91■□□□□ 0.46
SHROOM3-204ENST00000473602 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
SHROOM3-204ENST00000473602 MSH5O43196 834 aa17.9■□□□□ 0.46
SHROOM3-204ENST00000473602 SLC27A3Q5K4L6 730 aa17.9■□□□□ 0.46
SHROOM3-204ENST00000473602 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
SHROOM3-204ENST00000473602 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
SHROOM3-204ENST00000473602 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
SHROOM3-204ENST00000473602 GGNBP2Q9H3C7 697 aa17.9■□□□□ 0.46
SHROOM3-204ENST00000473602 KCNQ4P56696 695 aa17.89■□□□□ 0.45
SHROOM3-204ENST00000473602 IP6K1Q92551 441 aa17.89■□□□□ 0.45
SHROOM3-204ENST00000473602 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
SHROOM3-204ENST00000473602 TFCP2L1Q9NZI6 479 aa17.89■□□□□ 0.45
SHROOM3-204ENST00000473602 PAPPAQ13219 1627 aa17.89■□□□□ 0.45
SHROOM3-204ENST00000473602 CGNL1Q0VF96 1302 aa17.89■□□□□ 0.45
SHROOM3-204ENST00000473602 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
SHROOM3-204ENST00000473602 MAP3K19Q56UN5 1328 aa17.88■□□□□ 0.45
SHROOM3-204ENST00000473602 PNPLA7Q6ZV29 1317 aa17.88■□□□□ 0.45
SHROOM3-204ENST00000473602 GIGYF1O75420 1035 aaPredicted RBP17.87■□□□□ 0.45
SHROOM3-204ENST00000473602 PRIM1P49642 420 aaKnown RBP17.87■□□□□ 0.45
SHROOM3-204ENST00000473602 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
SHROOM3-204ENST00000473602 KIF24Q5T7B8 1368 aa17.87■□□□□ 0.45
SHROOM3-204ENST00000473602 CHD4Q14839 1912 aa17.86■□□□□ 0.45
SHROOM3-204ENST00000473602 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
SHROOM3-204ENST00000473602 ADRA2BP18089 450 aa17.86■□□□□ 0.45
SHROOM3-204ENST00000473602 NLGN2Q8NFZ4 835 aa17.86■□□□□ 0.45
SHROOM3-204ENST00000473602 BTAF1O14981 1849 aa17.85■□□□□ 0.45
SHROOM3-204ENST00000473602 HOXC9P31274 260 aa17.85■□□□□ 0.45
SHROOM3-204ENST00000473602 AMPHP49418 695 aa17.85■□□□□ 0.45
SHROOM3-204ENST00000473602 CEP350Q5VT06 3117 aa17.84■□□□□ 0.45
SHROOM3-204ENST00000473602 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
SHROOM3-204ENST00000473602 NSD2O96028 1365 aa17.82■□□□□ 0.44
SHROOM3-204ENST00000473602 FLT4P35916 1363 aa17.82■□□□□ 0.44
SHROOM3-204ENST00000473602 RGPD2P0DJD1 1756 aa17.82■□□□□ 0.44
SHROOM3-204ENST00000473602 RRS1Q15050 365 aaKnown RBP17.82■□□□□ 0.44
SHROOM3-204ENST00000473602 PANK3Q9H999 370 aa17.82■□□□□ 0.44
SHROOM3-204ENST00000473602 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
SHROOM3-204ENST00000473602 YBX3P16989 372 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHROOM3-204ENST00000473602 FBLN1P23142 703 aa17.81■□□□□ 0.44
SHROOM3-204ENST00000473602 INSRP06213 1382 aa17.8■□□□□ 0.44
SHROOM3-204ENST00000473602 KIF7Q2M1P5 1343 aa17.8■□□□□ 0.44
SHROOM3-204ENST00000473602 GRIN3BO60391 1043 aa17.8■□□□□ 0.44
SHROOM3-204ENST00000473602 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
SHROOM3-204ENST00000473602 COL23A1Q86Y22 540 aaPredicted RBP17.79■□□□□ 0.44
SHROOM3-204ENST00000473602 ZCRB1Q8TBF4 217 aaKnown RBP17.79■□□□□ 0.44
SHROOM3-204ENST00000473602 IFFO2Q5TF58 517 aa17.77■□□□□ 0.44
SHROOM3-204ENST00000473602 MSL1Q68DK7 614 aa17.76■□□□□ 0.43
SHROOM3-204ENST00000473602 KNSTRNQ9Y448 316 aa17.75■□□□□ 0.43
SHROOM3-204ENST00000473602 HSP90AB2PQ58FF8 381 aa17.74■□□□□ 0.43
SHROOM3-204ENST00000473602 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
SHROOM3-204ENST00000473602 WASHC2AQ641Q2 1341 aa17.73■□□□□ 0.43
SHROOM3-204ENST00000473602 SHANK3Q9BYB0 1731 aa17.72■□□□□ 0.43
SHROOM3-204ENST00000473602 NBPF6Q5VWK0 638 aa17.72■□□□□ 0.43
SHROOM3-204ENST00000473602 NBPF4Q96M43 638 aa17.72■□□□□ 0.43
SHROOM3-204ENST00000473602 QSER1Q2KHR3 1735 aa17.72■□□□□ 0.43
SHROOM3-204ENST00000473602 MEGF6O75095 1541 aa17.72■□□□□ 0.43
SHROOM3-204ENST00000473602 USHBP1Q8N6Y0 703 aa17.71■□□□□ 0.43
SHROOM3-204ENST00000473602 POLKQ9UBT6 870 aa17.71■□□□□ 0.43
SHROOM3-204ENST00000473602 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
SHROOM3-204ENST00000473602 COL24A1Q17RW2 1714 aa17.71■□□□□ 0.43
SHROOM3-204ENST00000473602 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
SHROOM3-204ENST00000473602 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
SHROOM3-204ENST00000473602 RAPGEF4Q8WZA2 1011 aa17.69■□□□□ 0.42
SHROOM3-204ENST00000473602 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
SHROOM3-204ENST00000473602 TNNT2P45379 298 aaPredicted RBP17.68■□□□□ 0.42
SHROOM3-204ENST00000473602 AMER1Q5JTC6 1135 aaPredicted RBP17.68■□□□□ 0.42
SHROOM3-204ENST00000473602 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
SHROOM3-204ENST00000473602 GPBP1L1Q9HC44 474 aaPredicted RBP17.68■□□□□ 0.42
SHROOM3-204ENST00000473602 TUBGCP6Q96RT7 1819 aa17.68■□□□□ 0.42
SHROOM3-204ENST00000473602 PKD1L3Q7Z443 1732 aa17.67■□□□□ 0.42
SHROOM3-204ENST00000473602 PER1O15534 1290 aaPredicted RBP17.67■□□□□ 0.42
SHROOM3-204ENST00000473602 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
SHROOM3-204ENST00000473602 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
SHROOM3-204ENST00000473602 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
SHROOM3-204ENST00000473602 MPRIPQ6WCQ1 1025 aa17.66■□□□□ 0.42
SHROOM3-204ENST00000473602 ZNF526Q8TF50 670 aaPredicted RBP17.66■□□□□ 0.42
SHROOM3-204ENST00000473602 LY75O60449 1722 aa17.66■□□□□ 0.42
SHROOM3-204ENST00000473602 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
SHROOM3-204ENST00000473602 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
SHROOM3-204ENST00000473602 PLEKHG2Q9H7P9 1386 aa17.65■□□□□ 0.42
SHROOM3-204ENST00000473602 WWC3Q9ULE0 1092 aa17.64■□□□□ 0.41
SHROOM3-204ENST00000473602 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
SHROOM3-204ENST00000473602 HSPA6P17066 643 aa17.63■□□□□ 0.41
SHROOM3-204ENST00000473602 SMIM5Q71RC9 77 aa17.63■□□□□ 0.41
SHROOM3-204ENST00000473602 AMIGO3Q86WK7 504 aa17.63■□□□□ 0.41
SHROOM3-204ENST00000473602 CYP27B1O15528 508 aa17.62■□□□□ 0.41
SHROOM3-204ENST00000473602 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
SHROOM3-204ENST00000473602 AK7Q96M32 723 aa17.62■□□□□ 0.41
SHROOM3-204ENST00000473602 EYA1Q99502 592 aa17.62■□□□□ 0.41
SHROOM3-204ENST00000473602 PCDH11XQ9BZA7 1347 aa17.62■□□□□ 0.41
SHROOM3-204ENST00000473602 PCDH11YQ9BZA8 1340 aa17.62■□□□□ 0.41
SHROOM3-204ENST00000473602 PHF14O94880 888 aa17.61■□□□□ 0.41
SHROOM3-204ENST00000473602 SMARCC1Q92922 1105 aaPredicted RBP17.61■□□□□ 0.41
SHROOM3-204ENST00000473602 ADCY9O60503 1353 aa17.61■□□□□ 0.41
SHROOM3-204ENST00000473602 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
SHROOM3-204ENST00000473602 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
SHROOM3-204ENST00000473602 PIGBQ92521 554 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms