RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 AACSQ86V21 672 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 AKAP2Q9Y2D5 859 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 RPGRIP1LQ68CZ1 1315 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 ANKRD18BA2A2Z9 1011 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 AMOTQ4VCS5 1084 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 CDC5LQ99459 802 aaKnown RBP10.18□□□□□ -0.78
CD47-204ENST00000471694 IGF1RP08069 1367 aa10.18□□□□□ -0.78
CD47-204ENST00000471694 IFIT5Q13325 482 aaKnown RBP10.17□□□□□ -0.78
CD47-204ENST00000471694 BRPF1P55201 1214 aaPredicted RBP10.17□□□□□ -0.78
CD47-204ENST00000471694 LNPKQ9C0E8 428 aa10.17□□□□□ -0.78
CD47-204ENST00000471694 C9orf84Q5VXU9 1444 aa10.17□□□□□ -0.78
CD47-204ENST00000471694 SSR1P43307 286 aaKnown RBP10.17□□□□□ -0.78
CD47-204ENST00000471694 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
CD47-204ENST00000471694 TRMT1LQ7Z2T5 733 aaKnown RBP10.17□□□□□ -0.78
CD47-204ENST00000471694 ZNF592Q92610 1267 aa10.17□□□□□ -0.78
CD47-204ENST00000471694 CCDC150Q8NCX0 1101 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 SMARCC1Q92922 1105 aaPredicted RBP10.16□□□□□ -0.78
CD47-204ENST00000471694 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 SLC4A8Q2Y0W8 1093 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 TTLL5Q6EMB2 1281 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 TEX13AQ9BXU3 409 aaPredicted RBP10.16□□□□□ -0.78
CD47-204ENST00000471694 MYO6Q9UM54 1294 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 ADGRL1O94910 1474 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 TEX14Q8IWB6 1497 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 ZMYND15Q9H091 742 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
CD47-204ENST00000471694 CCT4P50991 539 aaKnown RBP10.16□□□□□ -0.78
CD47-204ENST00000471694 CAGE1Q8TC20 777 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 LRRC59Q96AG4 307 aaKnown RBP10.16□□□□□ -0.78
CD47-204ENST00000471694 SLC12A5Q9H2X9 1139 aa10.16□□□□□ -0.78
CD47-204ENST00000471694 RUFY1Q96T51 708 aa10.15□□□□□ -0.78
CD47-204ENST00000471694 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
CD47-204ENST00000471694 STIM1Q13586 685 aa10.15□□□□□ -0.78
CD47-204ENST00000471694 CENPQQ7L2Z9 268 aaPredicted RBP10.15□□□□□ -0.78
CD47-204ENST00000471694 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.78
CD47-204ENST00000471694 APBA3O96018 575 aa10.15□□□□□ -0.78
CD47-204ENST00000471694 NPHP3Q7Z494 1330 aa10.15□□□□□ -0.78
CD47-204ENST00000471694 NEFHP12036 1026 aa10.15□□□□□ -0.79
CD47-204ENST00000471694 STK3Q13188 491 aa10.15□□□□□ -0.79
CD47-204ENST00000471694 LRSAM1Q6UWE0 723 aa10.15□□□□□ -0.79
CD47-204ENST00000471694 ZNF526Q8TF50 670 aaPredicted RBP10.15□□□□□ -0.79
CD47-204ENST00000471694 FMNL2Q96PY5 1086 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 DENND4BO75064 1496 aaPredicted RBP10.14□□□□□ -0.79
CD47-204ENST00000471694 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 EIF6P56537 245 aaKnown RBP10.14□□□□□ -0.79
CD47-204ENST00000471694 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.14□□□□□ -0.79
CD47-204ENST00000471694 LRRFIP2Q9Y608 721 aaKnown RBP10.14□□□□□ -0.79
CD47-204ENST00000471694 GOLGA6L3A6NEY3 463 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 SDF4Q9BRK5 362 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 DDX49Q9Y6V7 483 aaKnown RBP10.14□□□□□ -0.79
CD47-204ENST00000471694 ANKRD62A6NC57 917 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 CDR1P51861 262 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 FILIP1LQ4L180 1135 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 TNRQ92752 1358 aa10.14□□□□□ -0.79
CD47-204ENST00000471694 SKIDA1Q1XH10 827 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 SAMM50Q9Y512 469 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 TAF12Q16514 161 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 BAG3O95817 575 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 LDHCP07864 332 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 CKAP2LQ8IYA6 745 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 MIS18AQ9NYP9 233 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 NAIPQ13075 1403 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 IFNL2Q8IZJ0 200 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 NOP2P46087 812 aaKnown RBP10.13□□□□□ -0.79
CD47-204ENST00000471694 CEBPZQ03701 1054 aaKnown RBP10.13□□□□□ -0.79
CD47-204ENST00000471694 MAP3K12Q12852 859 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 SPTY2D1Q68D10 685 aaPredicted RBP10.13□□□□□ -0.79
CD47-204ENST00000471694 ANKRD24Q8TF21 1146 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 CTNNA3Q9UI47 895 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 NOD1Q9Y239 953 aa10.13□□□□□ -0.79
CD47-204ENST00000471694 RIMBP2O15034 1052 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
CD47-204ENST00000471694 LPXNO60711 386 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 GPS2Q13227 327 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 NAT10Q9H0A0 1025 aaKnown RBP10.12□□□□□ -0.79
CD47-204ENST00000471694 LARP1Q6PKG0 1096 aaKnown RBP10.12□□□□□ -0.79
CD47-204ENST00000471694 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
CD47-204ENST00000471694 ZRANB1Q9UGI0 708 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 USP21Q9UK80 565 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 HECW1Q76N89 1606 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 DDX11L8A8MPP1 907 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 CCDC181Q5TID7 509 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 ZNF396Q96N95 335 aaPredicted RBP10.12□□□□□ -0.79
CD47-204ENST00000471694 KIF22Q14807 665 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 UBA5Q9GZZ9 404 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 GSTO1P78417 241 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 STK38Q15208 465 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 FERMT2Q96AC1 680 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 PSMD1Q99460 953 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 NYXQ9GZU5 481 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 NCOA2Q15596 1464 aa10.12□□□□□ -0.79
CD47-204ENST00000471694 SRGAP3O43295 1099 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 HOMER2Q9NSB8 354 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 CDKL5O76039 1030 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 TNNI2P48788 182 aa10.11□□□□□ -0.79
CD47-204ENST00000471694 LRRCC1Q9C099 1032 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms