RNA–Protein interactions for RNA: ENST00000470581.1

SEMA3C-207, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-207ENST00000470581 BCL11BQ9C0K0 894 aaPredicted RBP33.49■■■□□ 2.95
SEMA3C-207ENST00000470581 SHANK3Q9BYB0 1731 aa33.47■■■□□ 2.95
SEMA3C-207ENST00000470581 PTF1AQ7RTS3 328 aa33.46■■■□□ 2.95
SEMA3C-207ENST00000470581 EZH2Q15910 746 aaKnown RBP33.45■■■□□ 2.95
SEMA3C-207ENST00000470581 ACSBG1Q96GR2 724 aa33.45■■■□□ 2.95
SEMA3C-207ENST00000470581 CAMKK2Q96RR4 588 aa33.44■■■□□ 2.94
SEMA3C-207ENST00000470581 IGSF1Q8N6C5 1336 aa33.44■■■□□ 2.94
SEMA3C-207ENST00000470581 KCNQ2O43526 872 aa33.42■■■□□ 2.94
SEMA3C-207ENST00000470581 NHSQ6T4R5 1651 aa33.41■■■□□ 2.94
SEMA3C-207ENST00000470581 PARD3Q8TEW0 1356 aa33.4■■■□□ 2.94
SEMA3C-207ENST00000470581 PCDH11XQ9BZA7 1347 aa33.4■■■□□ 2.94
SEMA3C-207ENST00000470581 PCDH11YQ9BZA8 1340 aa33.4■■■□□ 2.94
SEMA3C-207ENST00000470581 IL13P35225 146 aa33.4■■■□□ 2.94
SEMA3C-207ENST00000470581 KAT6BQ8WYB5 2073 aa33.4■■■□□ 2.94
SEMA3C-207ENST00000470581 SPG7Q9UQ90 795 aa33.38■■■□□ 2.93
SEMA3C-207ENST00000470581 PKD1L3Q7Z443 1732 aa33.38■■■□□ 2.93
SEMA3C-207ENST00000470581 DDX10Q13206 875 aaKnown RBP33.37■■■□□ 2.93
SEMA3C-207ENST00000470581 PLSCR1O15162 318 aa33.36■■■□□ 2.93
SEMA3C-207ENST00000470581 DIAPH1O60610 1272 aaKnown RBP33.34■■■□□ 2.93
SEMA3C-207ENST00000470581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.34■■■□□ 2.93
SEMA3C-207ENST00000470581 CYP27B1O15528 508 aa33.33■■■□□ 2.93
SEMA3C-207ENST00000470581 SULT6B1Q6IMI4 303 aa33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 AEBP1Q8IUX7 1158 aa33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 DOT1LQ8TEK3 1739 aa33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 SYTL4Q96C24 671 aaPredicted RBP33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 RREB1Q92766 1687 aa33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 RGPD3A6NKT7 1758 aaPredicted RBP33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 RGPD4Q7Z3J3 1758 aa33.32■■■□□ 2.92
SEMA3C-207ENST00000470581 PRIM1P49642 420 aaKnown RBP33.31■■■□□ 2.92
SEMA3C-207ENST00000470581 PPP2R1AP30153 589 aa33.3■■■□□ 2.92
SEMA3C-207ENST00000470581 PLEKHG2Q9H7P9 1386 aa33.3■■■□□ 2.92
SEMA3C-207ENST00000470581 BTAF1O14981 1849 aa33.3■■■□□ 2.92
SEMA3C-207ENST00000470581 COL3A1P02461 1466 aaPredicted RBP33.27■■■□□ 2.92
SEMA3C-207ENST00000470581 KDRP35968 1356 aa33.27■■■□□ 2.92
SEMA3C-207ENST00000470581 CFAP53Q96M91 514 aa33.27■■■□□ 2.92
SEMA3C-207ENST00000470581 NUP188Q5SRE5 1749 aa33.26■■■□□ 2.92
SEMA3C-207ENST00000470581 PLEKHO1Q53GL0 409 aaPredicted RBP33.26■■■□□ 2.91
SEMA3C-207ENST00000470581 IFNL2Q8IZJ0 200 aa33.25■■■□□ 2.91
SEMA3C-207ENST00000470581 HMOX1P09601 288 aa33.23■■■□□ 2.91
SEMA3C-207ENST00000470581 PHKG2P15735 406 aa33.23■■■□□ 2.91
SEMA3C-207ENST00000470581 NKX1-1Q15270 411 aaPredicted RBP33.23■■■□□ 2.91
SEMA3C-207ENST00000470581 AMOTQ4VCS5 1084 aa33.23■■■□□ 2.91
SEMA3C-207ENST00000470581 PROM2Q8N271 834 aa33.23■■■□□ 2.91
SEMA3C-207ENST00000470581 TXNRD1Q16881 649 aa33.22■■■□□ 2.91
SEMA3C-207ENST00000470581 U2SURPO15042 1029 aaKnown RBP33.21■■■□□ 2.91
SEMA3C-207ENST00000470581 NBPF14Q5TI25 921 aa33.21■■■□□ 2.91
SEMA3C-207ENST00000470581 PSDA5PKW4 1024 aaPredicted RBP33.2■■■□□ 2.91
SEMA3C-207ENST00000470581 ZNF530Q6P9A1 599 aaPredicted RBP33.19■■■□□ 2.9
SEMA3C-207ENST00000470581 R3HDM1Q15032 1099 aaKnown RBP33.18■■■□□ 2.9
SEMA3C-207ENST00000470581 TOGARAM1Q9Y4F4 1720 aa33.18■■■□□ 2.9
SEMA3C-207ENST00000470581 MPRIPQ6WCQ1 1025 aa33.16■■■□□ 2.9
SEMA3C-207ENST00000470581 ITGB4P16144 1822 aa33.14■■■□□ 2.9
SEMA3C-207ENST00000470581 RALBP1Q15311 655 aa33.14■■■□□ 2.9
SEMA3C-207ENST00000470581 NUDCQ9Y266 331 aa33.14■■■□□ 2.9
SEMA3C-207ENST00000470581 HSP90AB1P08238 724 aaKnown RBP33.13■■■□□ 2.89
SEMA3C-207ENST00000470581 C1orf141Q5JVX7 400 aa33.13■■■□□ 2.89
SEMA3C-207ENST00000470581 ZNF316A6NFI3 1004 aaPredicted RBP33.1■■■□□ 2.89
SEMA3C-207ENST00000470581 DCAF5Q96JK2 942 aa33.09■■■□□ 2.89
SEMA3C-207ENST00000470581 TMOD3Q9NYL9 352 aa33.09■■■□□ 2.89
SEMA3C-207ENST00000470581 PIGBQ92521 554 aa33.08■■■□□ 2.89
SEMA3C-207ENST00000470581 ANO8Q9HCE9 1232 aaPredicted RBP33.08■■■□□ 2.89
SEMA3C-207ENST00000470581 SLC27A3Q5K4L6 730 aa33.07■■■□□ 2.88
SEMA3C-207ENST00000470581 LRRC4BQ9NT99 713 aa33.07■■■□□ 2.88
SEMA3C-207ENST00000470581 LY75O60449 1722 aa33.07■■■□□ 2.88
SEMA3C-207ENST00000470581 U2AF1L5P0DN76 240 aaPredicted RBP33.06■■■□□ 2.88
SEMA3C-207ENST00000470581 U2AF1Q01081 240 aaKnown RBP eCLIP33.06■■■□□ 2.88
SEMA3C-207ENST00000470581 ERVV-2B6SEH9 535 aa33.05■■■□□ 2.88
SEMA3C-207ENST00000470581 AKAP4Q5JQC9 854 aa33.05■■■□□ 2.88
SEMA3C-207ENST00000470581 KDM6AO15550 1401 aaPredicted RBP33.04■■■□□ 2.88
SEMA3C-207ENST00000470581 MTHFSDQ2M296 383 aaKnown RBP33.04■■■□□ 2.88
SEMA3C-207ENST00000470581 STK32BQ9NY57 414 aa33.04■■■□□ 2.88
SEMA3C-207ENST00000470581 SMARCC1Q92922 1105 aaPredicted RBP33.03■■■□□ 2.88
SEMA3C-207ENST00000470581 PALLDQ8WX93 1383 aa33.02■■■□□ 2.88
SEMA3C-207ENST00000470581 KCNQ4P56696 695 aa33.02■■■□□ 2.88
SEMA3C-207ENST00000470581 RSPH6AQ9H0K4 717 aa33.02■■■□□ 2.88
SEMA3C-207ENST00000470581 CCNL1Q9UK58 526 aaPredicted RBP33.02■■■□□ 2.88
SEMA3C-207ENST00000470581 PRKAR2BP31323 418 aa33■■■□□ 2.87
SEMA3C-207ENST00000470581 CABP4P57796 275 aa33■■■□□ 2.87
SEMA3C-207ENST00000470581 SLC15A2Q16348 729 aa33■■■□□ 2.87
SEMA3C-207ENST00000470581 MYBBP1AQ9BQG0 1328 aaKnown RBP33■■■□□ 2.87
SEMA3C-207ENST00000470581 PAPPAQ13219 1627 aa32.99■■■□□ 2.87
SEMA3C-207ENST00000470581 FCHSD2O94868 740 aa32.97■■■□□ 2.87
SEMA3C-207ENST00000470581 ASAP1Q9ULH1 1129 aa32.97■■■□□ 2.87
SEMA3C-207ENST00000470581 SCN11AQ9UI33 1791 aa32.96■■■□□ 2.87
SEMA3C-207ENST00000470581 GAS2L2Q8NHY3 880 aa32.96■■■□□ 2.87
SEMA3C-207ENST00000470581 PRKRIP1Q9H875 184 aaPredicted RBP32.95■■■□□ 2.87
SEMA3C-207ENST00000470581 ZNF827Q17R98 1081 aa32.94■■■□□ 2.86
SEMA3C-207ENST00000470581 PHACTR3Q96KR7 559 aa32.94■■■□□ 2.86
SEMA3C-207ENST00000470581 LGR6Q9HBX8 967 aa32.94■■■□□ 2.86
SEMA3C-207ENST00000470581 ATG3Q9NT62 314 aa32.94■■■□□ 2.86
SEMA3C-207ENST00000470581 NFATC2IPQ8NCF5 419 aa32.93■■■□□ 2.86
SEMA3C-207ENST00000470581 RNMTO43148 476 aaKnown RBP32.92■■■□□ 2.86
SEMA3C-207ENST00000470581 AKT1S1Q96B36 256 aa32.91■■■□□ 2.86
SEMA3C-207ENST00000470581 SRCAPQ6ZRS2 3230 aa32.91■■■□□ 2.86
SEMA3C-207ENST00000470581 VIRMAQ69YN4 1812 aaKnown RBP32.91■■■□□ 2.86
SEMA3C-207ENST00000470581 MAP3K5Q99683 1374 aa32.89■■■□□ 2.86
SEMA3C-207ENST00000470581 LOC102724428A0A0B4J2F2 783 aa32.89■■■□□ 2.86
SEMA3C-207ENST00000470581 SIK1P57059 783 aa32.89■■■□□ 2.86
SEMA3C-207ENST00000470581 GNAT3A8MTJ3 354 aa32.88■■■□□ 2.85
SEMA3C-207ENST00000470581 HMGB2P26583 209 aaKnown RBP32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms