RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 PKP1Q13835 747 aa16.21■□□□□ 0.19
SFXN3-205ENST00000470252 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
SFXN3-205ENST00000470252 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
SFXN3-205ENST00000470252 ATP10DQ9P241 1426 aa16.2■□□□□ 0.18
SFXN3-205ENST00000470252 CYP2E1P05181 493 aaPredicted RBP16.2■□□□□ 0.18
SFXN3-205ENST00000470252 SDSP20132 328 aa16.2■□□□□ 0.18
SFXN3-205ENST00000470252 DLC1Q96QB1 1528 aa16.2■□□□□ 0.18
SFXN3-205ENST00000470252 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
SFXN3-205ENST00000470252 ZNF445P59923 1031 aa16.19■□□□□ 0.18
SFXN3-205ENST00000470252 ZSCAN30Q86W11 494 aa16.19■□□□□ 0.18
SFXN3-205ENST00000470252 LMBRD1Q9NUN5 540 aa16.19■□□□□ 0.18
SFXN3-205ENST00000470252 ST18O60284 1047 aa16.19■□□□□ 0.18
SFXN3-205ENST00000470252 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
SFXN3-205ENST00000470252 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
SFXN3-205ENST00000470252 AATKQ6ZMQ8 1374 aa16.19■□□□□ 0.18
SFXN3-205ENST00000470252 KRT24Q2M2I5 525 aa16.18■□□□□ 0.18
SFXN3-205ENST00000470252 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
SFXN3-205ENST00000470252 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
SFXN3-205ENST00000470252 COG3Q96JB2 828 aa16.18■□□□□ 0.18
SFXN3-205ENST00000470252 CWC22Q9HCG8 908 aaKnown RBP16.18■□□□□ 0.18
SFXN3-205ENST00000470252 MSH6P52701 1360 aa16.18■□□□□ 0.18
SFXN3-205ENST00000470252 TPM2P07951 284 aa16.17■□□□□ 0.18
SFXN3-205ENST00000470252 MSNP26038 577 aaKnown RBP16.17■□□□□ 0.18
SFXN3-205ENST00000470252 ZGPATQ8N5A5 531 aaKnown RBP16.17■□□□□ 0.18
SFXN3-205ENST00000470252 RGS12O14924 1447 aa16.17■□□□□ 0.18
SFXN3-205ENST00000470252 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
SFXN3-205ENST00000470252 PRPF40AO75400 957 aaKnown RBP16.16■□□□□ 0.18
SFXN3-205ENST00000470252 KIAA1211Q6ZU35 1233 aa16.16■□□□□ 0.18
SFXN3-205ENST00000470252 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
SFXN3-205ENST00000470252 WASLO00401 505 aaPredicted RBP16.15■□□□□ 0.18
SFXN3-205ENST00000470252 REC8O95072 547 aa16.15■□□□□ 0.18
SFXN3-205ENST00000470252 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
SFXN3-205ENST00000470252 CPS1P31327 1500 aa16.15■□□□□ 0.18
SFXN3-205ENST00000470252 MEIS3Q99687 375 aa16.15■□□□□ 0.18
SFXN3-205ENST00000470252 RBSNQ9H1K0 784 aa16.15■□□□□ 0.18
SFXN3-205ENST00000470252 HAP1P54257 671 aaPredicted RBP16.14■□□□□ 0.17
SFXN3-205ENST00000470252 AEBP1Q8IUX7 1158 aa16.14■□□□□ 0.17
SFXN3-205ENST00000470252 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
SFXN3-205ENST00000470252 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
SFXN3-205ENST00000470252 ERC2O15083 957 aa16.13■□□□□ 0.17
SFXN3-205ENST00000470252 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
SFXN3-205ENST00000470252 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
SFXN3-205ENST00000470252 ZDHHC9Q9Y397 364 aa16.13■□□□□ 0.17
SFXN3-205ENST00000470252 ITSN1Q15811 1721 aa16.13■□□□□ 0.17
SFXN3-205ENST00000470252 MCM10Q7L590 875 aa16.13■□□□□ 0.17
SFXN3-205ENST00000470252 OFD1O75665 1012 aa16.12■□□□□ 0.17
SFXN3-205ENST00000470252 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
SFXN3-205ENST00000470252 NUDT16Q96DE0 195 aaKnown RBP16.12■□□□□ 0.17
SFXN3-205ENST00000470252 AKAP12Q02952 1782 aa16.12■□□□□ 0.17
SFXN3-205ENST00000470252 PTPRCP08575 1304 aa16.12■□□□□ 0.17
SFXN3-205ENST00000470252 CHL1O00533 1208 aa16.11■□□□□ 0.17
SFXN3-205ENST00000470252 C3P01024 1663 aa16.11■□□□□ 0.17
SFXN3-205ENST00000470252 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
SFXN3-205ENST00000470252 CHAMP1Q96JM3 812 aa16.11■□□□□ 0.17
SFXN3-205ENST00000470252 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
SFXN3-205ENST00000470252 NRKQ7Z2Y5 1582 aa16.11■□□□□ 0.17
SFXN3-205ENST00000470252 FOXD4L5Q5VV16 416 aaPredicted RBP16.1■□□□□ 0.17
SFXN3-205ENST00000470252 VSIG10Q8N0Z9 540 aa16.1■□□□□ 0.17
SFXN3-205ENST00000470252 FOXD4L4Q8WXT5 416 aaPredicted RBP16.1■□□□□ 0.17
SFXN3-205ENST00000470252 HMMRO75330 724 aa16.1■□□□□ 0.17
SFXN3-205ENST00000470252 EIF4A2Q14240 407 aaKnown RBP16.1■□□□□ 0.17
SFXN3-205ENST00000470252 HS1BP3Q53T59 392 aa16.1■□□□□ 0.17
SFXN3-205ENST00000470252 KIAA0232Q92628 1395 aa16.1■□□□□ 0.17
SFXN3-205ENST00000470252 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
SFXN3-205ENST00000470252 TXNDC2Q86VQ3 553 aa16.09■□□□□ 0.17
SFXN3-205ENST00000470252 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
SFXN3-205ENST00000470252 NEK4P51957 841 aa16.09■□□□□ 0.17
SFXN3-205ENST00000470252 PDLIM2Q96JY6 352 aa16.09■□□□□ 0.17
SFXN3-205ENST00000470252 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
SFXN3-205ENST00000470252 PDE1AP54750 535 aa16.08■□□□□ 0.17
SFXN3-205ENST00000470252 SLC4A10Q6U841 1118 aa16.08■□□□□ 0.17
SFXN3-205ENST00000470252 SYCE3A1L190 88 aa16.08■□□□□ 0.16
SFXN3-205ENST00000470252 NOL7Q9UMY1 257 aaKnown RBP16.08■□□□□ 0.16
SFXN3-205ENST00000470252 LRSAM1Q6UWE0 723 aa16.07■□□□□ 0.16
SFXN3-205ENST00000470252 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
SFXN3-205ENST00000470252 NSFL1CQ9UNZ2 370 aaKnown RBP16.07■□□□□ 0.16
SFXN3-205ENST00000470252 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
SFXN3-205ENST00000470252 OSBPL3Q9H4L5 887 aa16.07■□□□□ 0.16
SFXN3-205ENST00000470252 TUBGCP6Q96RT7 1819 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 NRXN3Q9Y4C0 1643 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 METP08581 1390 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 F6X3S4 739 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 TSHZ3Q63HK5 1081 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 ZMYND15Q9H091 742 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
SFXN3-205ENST00000470252 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.05■□□□□ 0.16
SFXN3-205ENST00000470252 R3HCC1Q9Y3T6 440 aaKnown RBP16.05■□□□□ 0.16
SFXN3-205ENST00000470252 KDM4FA0A1W2PPD8 638 aa16.05■□□□□ 0.16
SFXN3-205ENST00000470252 G2E3Q7L622 706 aa16.05■□□□□ 0.16
SFXN3-205ENST00000470252 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
SFXN3-205ENST00000470252 ZNF500O60304 480 aaPredicted RBP16.04■□□□□ 0.16
SFXN3-205ENST00000470252 XPCQ01831 940 aaPredicted RBP16.04■□□□□ 0.16
SFXN3-205ENST00000470252 MLECQ14165 292 aa16.04■□□□□ 0.16
SFXN3-205ENST00000470252 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
SFXN3-205ENST00000470252 MBD3O95983 291 aa16.04■□□□□ 0.16
SFXN3-205ENST00000470252 NOL8Q76FK4 1167 aaKnown RBP16.04■□□□□ 0.16
SFXN3-205ENST00000470252 ESYT1Q9BSJ8 1104 aa16.04■□□□□ 0.16
SFXN3-205ENST00000470252 MCM2P49736 904 aa16.03■□□□□ 0.16
SFXN3-205ENST00000470252 CCT4P50991 539 aaKnown RBP16.03■□□□□ 0.16
SFXN3-205ENST00000470252 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms