RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
NCSTN-212ENST00000469159 ZNF692Q9BU19 519 aaPredicted RBP11.62□□□□□ -0.55
NCSTN-212ENST00000469159 LY75O60449 1722 aa11.62□□□□□ -0.55
NCSTN-212ENST00000469159 NSD2O96028 1365 aa11.62□□□□□ -0.55
NCSTN-212ENST00000469159 ANKRD36BQ8N2N9 1353 aa11.62□□□□□ -0.55
NCSTN-212ENST00000469159 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
NCSTN-212ENST00000469159 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
NCSTN-212ENST00000469159 WWC3Q9ULE0 1092 aa11.61□□□□□ -0.55
NCSTN-212ENST00000469159 CENPJQ9HC77 1338 aaPredicted RBP11.6□□□□□ -0.55
NCSTN-212ENST00000469159 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
NCSTN-212ENST00000469159 NMRK2Q9NPI5 230 aa11.6□□□□□ -0.55
NCSTN-212ENST00000469159 CICQ96RK0 1608 aaPredicted RBP11.6□□□□□ -0.55
NCSTN-212ENST00000469159 FSTL1Q12841 308 aa11.59□□□□□ -0.55
NCSTN-212ENST00000469159 PIAS4Q8N2W9 510 aaPredicted RBP11.59□□□□□ -0.55
NCSTN-212ENST00000469159 ANKRD24Q8TF21 1146 aa11.59□□□□□ -0.55
NCSTN-212ENST00000469159 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
NCSTN-212ENST00000469159 USP47Q96K76 1375 aa11.57□□□□□ -0.56
NCSTN-212ENST00000469159 HMGB2P26583 209 aaKnown RBP11.57□□□□□ -0.56
NCSTN-212ENST00000469159 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
NCSTN-212ENST00000469159 KIAA1210Q9ULL0 1709 aa11.57□□□□□ -0.56
NCSTN-212ENST00000469159 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
NCSTN-212ENST00000469159 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
NCSTN-212ENST00000469159 DOT1LQ8TEK3 1739 aa11.55□□□□□ -0.56
NCSTN-212ENST00000469159 USP31Q70CQ4 1352 aa11.54□□□□□ -0.56
NCSTN-212ENST00000469159 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
NCSTN-212ENST00000469159 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
NCSTN-212ENST00000469159 EVC2Q86UK5 1308 aa11.54□□□□□ -0.56
NCSTN-212ENST00000469159 C5P01031 1676 aa11.53□□□□□ -0.56
NCSTN-212ENST00000469159 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
NCSTN-212ENST00000469159 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
NCSTN-212ENST00000469159 USP54Q70EL1 1684 aa11.52□□□□□ -0.56
NCSTN-212ENST00000469159 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.57
NCSTN-212ENST00000469159 LTN1O94822 1766 aa11.51□□□□□ -0.57
NCSTN-212ENST00000469159 TGFB2P61812 414 aa11.51□□□□□ -0.57
NCSTN-212ENST00000469159 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
NCSTN-212ENST00000469159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.51□□□□□ -0.57
NCSTN-212ENST00000469159 BCS1LQ9Y276 419 aa11.51□□□□□ -0.57
NCSTN-212ENST00000469159 C10orf71Q711Q0 1435 aa11.51□□□□□ -0.57
NCSTN-212ENST00000469159 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
NCSTN-212ENST00000469159 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
NCSTN-212ENST00000469159 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
NCSTN-212ENST00000469159 IP6K1Q92551 441 aa11.5□□□□□ -0.57
NCSTN-212ENST00000469159 AK7Q96M32 723 aa11.5□□□□□ -0.57
NCSTN-212ENST00000469159 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
NCSTN-212ENST00000469159 PLEKHG2Q9H7P9 1386 aa11.5□□□□□ -0.57
NCSTN-212ENST00000469159 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 PHF14O94880 888 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 C9orf131Q5VYM1 1079 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 NME9Q86XW9 330 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 RAB3GAP2Q9H2M9 1393 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
NCSTN-212ENST00000469159 A0A0G2JLW4 131 aa11.48□□□□□ -0.57
NCSTN-212ENST00000469159 SSFA2P28290 1259 aa11.48□□□□□ -0.57
NCSTN-212ENST00000469159 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
NCSTN-212ENST00000469159 RRAGCQ9HB90 399 aa11.48□□□□□ -0.57
NCSTN-212ENST00000469159 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
NCSTN-212ENST00000469159 FAM208AQ9UK61 1670 aaKnown RBP11.47□□□□□ -0.57
NCSTN-212ENST00000469159 MEGF6O75095 1541 aa11.47□□□□□ -0.57
NCSTN-212ENST00000469159 KCPQ6ZWJ8 1503 aa11.47□□□□□ -0.57
NCSTN-212ENST00000469159 SBNO2Q9Y2G9 1366 aa11.47□□□□□ -0.57
NCSTN-212ENST00000469159 UBR3Q6ZT12 1888 aa11.46□□□□□ -0.57
NCSTN-212ENST00000469159 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.57
NCSTN-212ENST00000469159 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.57
NCSTN-212ENST00000469159 KIAA1551Q9HCM1 1747 aa11.46□□□□□ -0.57
NCSTN-212ENST00000469159 FCHSD2O94868 740 aa11.46□□□□□ -0.57
NCSTN-212ENST00000469159 MMP10P09238 476 aa11.46□□□□□ -0.57
NCSTN-212ENST00000469159 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
NCSTN-212ENST00000469159 MPRIPQ6WCQ1 1025 aa11.45□□□□□ -0.58
NCSTN-212ENST00000469159 SMARCC1Q92922 1105 aaPredicted RBP11.45□□□□□ -0.58
NCSTN-212ENST00000469159 N4BP2Q86UW6 1770 aaPredicted RBP11.45□□□□□ -0.58
NCSTN-212ENST00000469159 DPEP1P16444 411 aa11.44□□□□□ -0.58
NCSTN-212ENST00000469159 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
NCSTN-212ENST00000469159 KCNA3P22001 575 aa11.43□□□□□ -0.58
NCSTN-212ENST00000469159 LINC00116Q8NCU8 138 aa11.43□□□□□ -0.58
NCSTN-212ENST00000469159 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
NCSTN-212ENST00000469159 HOXC9P31274 260 aa11.42□□□□□ -0.58
NCSTN-212ENST00000469159 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
NCSTN-212ENST00000469159 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
NCSTN-212ENST00000469159 GNPATO15228 680 aa11.41□□□□□ -0.58
NCSTN-212ENST00000469159 NLGN1Q8N2Q7 840 aa11.41□□□□□ -0.58
NCSTN-212ENST00000469159 DCAF5Q96JK2 942 aa11.41□□□□□ -0.58
NCSTN-212ENST00000469159 PRDM10Q9NQV6 1147 aa11.41□□□□□ -0.58
NCSTN-212ENST00000469159 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
NCSTN-212ENST00000469159 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
NCSTN-212ENST00000469159 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.58
NCSTN-212ENST00000469159 MAP3K19Q56UN5 1328 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 LOC102724428A0A0B4J2F2 783 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
NCSTN-212ENST00000469159 SIK1P57059 783 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 FAM161AQ3B820 660 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 NBPF6Q5VWK0 638 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 RAPGEF4Q8WZA2 1011 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 PIGBQ92521 554 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 NBPF4Q96M43 638 aa11.4□□□□□ -0.58
NCSTN-212ENST00000469159 PIM2Q9P1W9 311 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms