RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 EDC4Q6P2E9 1401 aaKnown RBP9.74□□□□□ -0.85
MSL3-210ENST00000468149 A0A1W2PP64 1363 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 SLIT3O75094 1523 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 AFF2P51816 1311 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 HSPA5P11021 654 aaKnown RBP9.74□□□□□ -0.85
MSL3-210ENST00000468149 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
MSL3-210ENST00000468149 HDGFL2Q7Z4V5 671 aaPredicted RBP9.74□□□□□ -0.85
MSL3-210ENST00000468149 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 CABLES1Q8TDN4 633 aa9.74□□□□□ -0.85
MSL3-210ENST00000468149 ANKRD36BQ8N2N9 1353 aa9.73□□□□□ -0.85
MSL3-210ENST00000468149 USP19O94966 1318 aa9.73□□□□□ -0.85
MSL3-210ENST00000468149 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
MSL3-210ENST00000468149 LMO7Q8WWI1 1683 aa9.73□□□□□ -0.85
MSL3-210ENST00000468149 BCL9LQ86UU0 1499 aa9.73□□□□□ -0.85
MSL3-210ENST00000468149 COL18A1P39060 1754 aa9.72□□□□□ -0.85
MSL3-210ENST00000468149 ANKRD26Q9UPS8 1709 aa9.72□□□□□ -0.85
MSL3-210ENST00000468149 PATL2C9JE40 543 aaKnown RBP9.71□□□□□ -0.85
MSL3-210ENST00000468149 PRR29P0C7W0 189 aa9.71□□□□□ -0.85
MSL3-210ENST00000468149 POTEAQ6S8J7 498 aa9.71□□□□□ -0.85
MSL3-210ENST00000468149 GOPCQ9HD26 462 aa9.71□□□□□ -0.85
MSL3-210ENST00000468149 USP21Q9UK80 565 aa9.71□□□□□ -0.85
MSL3-210ENST00000468149 CPDO75976 1380 aa9.71□□□□□ -0.85
MSL3-210ENST00000468149 NLRP6P59044 892 aa9.71□□□□□ -0.86
MSL3-210ENST00000468149 MCM6Q14566 821 aa9.71□□□□□ -0.86
MSL3-210ENST00000468149 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
MSL3-210ENST00000468149 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
MSL3-210ENST00000468149 USP31Q70CQ4 1352 aa9.71□□□□□ -0.86
MSL3-210ENST00000468149 CDK12Q9NYV4 1490 aaPredicted RBP9.71□□□□□ -0.86
MSL3-210ENST00000468149 MAP2P11137 1827 aaKnown RBP9.7□□□□□ -0.86
MSL3-210ENST00000468149 ATRNO75882 1429 aa9.7□□□□□ -0.86
MSL3-210ENST00000468149 FAM83GA6ND36 823 aa9.7□□□□□ -0.86
MSL3-210ENST00000468149 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
MSL3-210ENST00000468149 GCP02774 474 aa9.7□□□□□ -0.86
MSL3-210ENST00000468149 TRPC5Q9UL62 973 aaPredicted RBP9.7□□□□□ -0.86
MSL3-210ENST00000468149 NFAT5O94916 1531 aa9.7□□□□□ -0.86
MSL3-210ENST00000468149 ABCC6O95255 1503 aa9.7□□□□□ -0.86
MSL3-210ENST00000468149 BRWD3Q6RI45 1802 aa9.69□□□□□ -0.86
MSL3-210ENST00000468149 KIAA0232Q92628 1395 aa9.69□□□□□ -0.86
MSL3-210ENST00000468149 BRD2P25440 801 aaKnown RBP9.69□□□□□ -0.86
MSL3-210ENST00000468149 UNC5CLQ8IV45 518 aa9.69□□□□□ -0.86
MSL3-210ENST00000468149 KCNH5Q8NCM2 988 aa9.69□□□□□ -0.86
MSL3-210ENST00000468149 QTRT2Q9H974 415 aaKnown RBP9.69□□□□□ -0.86
MSL3-210ENST00000468149 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
MSL3-210ENST00000468149 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
MSL3-210ENST00000468149 RXRBP28702 533 aa9.68□□□□□ -0.86
MSL3-210ENST00000468149 RBM6P78332 1123 aaKnown RBP9.68□□□□□ -0.86
MSL3-210ENST00000468149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.68□□□□□ -0.86
MSL3-210ENST00000468149 PRDM11Q9NQV5 511 aa9.68□□□□□ -0.86
MSL3-210ENST00000468149 GLI3P10071 1580 aa9.68□□□□□ -0.86
MSL3-210ENST00000468149 CAMTA1Q9Y6Y1 1673 aa9.68□□□□□ -0.86
MSL3-210ENST00000468149 WNK3Q9BYP7 1800 aa9.67□□□□□ -0.86
MSL3-210ENST00000468149 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
MSL3-210ENST00000468149 ZC3H6P61129 1189 aaKnown RBP9.67□□□□□ -0.86
MSL3-210ENST00000468149 PDE4CQ08493 712 aa9.67□□□□□ -0.86
MSL3-210ENST00000468149 NME9Q86XW9 330 aa9.67□□□□□ -0.86
MSL3-210ENST00000468149 BTG4Q9NY30 223 aa9.67□□□□□ -0.86
MSL3-210ENST00000468149 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
MSL3-210ENST00000468149 VPS72Q15906 364 aa9.66□□□□□ -0.86
MSL3-210ENST00000468149 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
MSL3-210ENST00000468149 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
MSL3-210ENST00000468149 AATKQ6ZMQ8 1374 aa9.65□□□□□ -0.86
MSL3-210ENST00000468149 NSD3Q9BZ95 1437 aa9.65□□□□□ -0.87
MSL3-210ENST00000468149 COL5A2P05997 1499 aaPredicted RBP9.64□□□□□ -0.87
MSL3-210ENST00000468149 FYB1O15117 783 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 CHRNA2Q15822 529 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 ARHGEF25Q86VW2 580 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 DHX37Q8IY37 1157 aaKnown RBP9.64□□□□□ -0.87
MSL3-210ENST00000468149 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 CARD14Q9BXL6 1004 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 ARIH1Q9Y4X5 557 aaPredicted RBP9.64□□□□□ -0.87
MSL3-210ENST00000468149 KIF7Q2M1P5 1343 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 RGS12O14924 1447 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 COG3Q96JB2 828 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 PLSCR2Q9NRY7 297 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
MSL3-210ENST00000468149 PARP4Q9UKK3 1724 aaKnown RBP9.63□□□□□ -0.87
MSL3-210ENST00000468149 RGPD2P0DJD1 1756 aa9.63□□□□□ -0.87
MSL3-210ENST00000468149 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
MSL3-210ENST00000468149 ZEB1P37275 1124 aaPredicted RBP9.62□□□□□ -0.87
MSL3-210ENST00000468149 SPATA31A5Q5VU36 1347 aa9.62□□□□□ -0.87
MSL3-210ENST00000468149 SPATA31A7Q8IWB4 1347 aa9.62□□□□□ -0.87
MSL3-210ENST00000468149 EVA1CP58658 441 aa9.61□□□□□ -0.87
MSL3-210ENST00000468149 KCNA1Q09470 495 aa9.61□□□□□ -0.87
MSL3-210ENST00000468149 PANK3Q9H999 370 aa9.61□□□□□ -0.87
MSL3-210ENST00000468149 NSD2O96028 1365 aa9.61□□□□□ -0.87
MSL3-210ENST00000468149 CCDC7Q96M83 1385 aa9.61□□□□□ -0.87
MSL3-210ENST00000468149 BLMP54132 1417 aaPredicted RBP9.61□□□□□ -0.87
MSL3-210ENST00000468149 CRB1P82279 1406 aa9.61□□□□□ -0.87
MSL3-210ENST00000468149 SOX12O15370 315 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 KIF24Q5T7B8 1368 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 SPATA31A1Q5TZJ5 1347 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 WASHC2AQ641Q2 1341 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 CCDC125Q86Z20 511 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 PCMTD1Q96MG8 357 aaPredicted RBP9.6□□□□□ -0.87
MSL3-210ENST00000468149 GGNBP2Q9H3C7 697 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 PEAK1Q9H792 1746 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 STRN4Q9NRL3 753 aa9.6□□□□□ -0.87
MSL3-210ENST00000468149 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms