RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 RGPD1P0DJD0 1748 aa17.97■□□□□ 0.47
SEC16A-208ENST00000467838 KIAA0232Q92628 1395 aa17.96■□□□□ 0.47
SEC16A-208ENST00000467838 GOLGA6L22H0YM25 854 aa17.96■□□□□ 0.47
SEC16A-208ENST00000467838 WASLO00401 505 aaPredicted RBP17.96■□□□□ 0.47
SEC16A-208ENST00000467838 CYP2E1P05181 493 aaPredicted RBP17.96■□□□□ 0.47
SEC16A-208ENST00000467838 HDGFP51858 240 aaKnown RBP17.96■□□□□ 0.47
SEC16A-208ENST00000467838 WAPLQ7Z5K2 1190 aa17.96■□□□□ 0.47
SEC16A-208ENST00000467838 NME9Q86XW9 330 aa17.96■□□□□ 0.47
SEC16A-208ENST00000467838 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
SEC16A-208ENST00000467838 BAG4O95429 457 aaKnown RBP17.95■□□□□ 0.46
SEC16A-208ENST00000467838 HAP1P54257 671 aaPredicted RBP17.95■□□□□ 0.46
SEC16A-208ENST00000467838 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
SEC16A-208ENST00000467838 PPP1R9BQ96SB3 815 aa17.94■□□□□ 0.46
SEC16A-208ENST00000467838 USP26Q9BXU7 913 aa17.94■□□□□ 0.46
SEC16A-208ENST00000467838 ELL2O00472 640 aaPredicted RBP17.93■□□□□ 0.46
SEC16A-208ENST00000467838 SIRT1Q96EB6 747 aa17.93■□□□□ 0.46
SEC16A-208ENST00000467838 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
SEC16A-208ENST00000467838 RTL1A6NKG5 1358 aa17.92■□□□□ 0.46
SEC16A-208ENST00000467838 NUCB2P80303 420 aa17.92■□□□□ 0.46
SEC16A-208ENST00000467838 CCDC173Q0VFZ6 552 aa17.92■□□□□ 0.46
SEC16A-208ENST00000467838 COG3Q96JB2 828 aa17.92■□□□□ 0.46
SEC16A-208ENST00000467838 TUBGCP6Q96RT7 1819 aa17.92■□□□□ 0.46
SEC16A-208ENST00000467838 PTPRCP08575 1304 aa17.92■□□□□ 0.46
SEC16A-208ENST00000467838 CEP85Q6P2H3 762 aa17.91■□□□□ 0.46
SEC16A-208ENST00000467838 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
SEC16A-208ENST00000467838 MSH6P52701 1360 aa17.91■□□□□ 0.46
SEC16A-208ENST00000467838 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
SEC16A-208ENST00000467838 ZNF445P59923 1031 aa17.91■□□□□ 0.46
SEC16A-208ENST00000467838 NAP1L5Q96NT1 182 aaPredicted RBP17.91■□□□□ 0.46
SEC16A-208ENST00000467838 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
SEC16A-208ENST00000467838 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
SEC16A-208ENST00000467838 AK9Q5TCS8 1911 aa17.9■□□□□ 0.46
SEC16A-208ENST00000467838 CHL1O00533 1208 aa17.9■□□□□ 0.46
SEC16A-208ENST00000467838 TRIM44Q96DX7 344 aaPredicted RBP17.9■□□□□ 0.46
SEC16A-208ENST00000467838 CWC22Q9HCG8 908 aaKnown RBP17.9■□□□□ 0.46
SEC16A-208ENST00000467838 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.46
SEC16A-208ENST00000467838 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.46
SEC16A-208ENST00000467838 METP08581 1390 aa17.89■□□□□ 0.45
SEC16A-208ENST00000467838 SLIT1O75093 1534 aa17.89■□□□□ 0.45
SEC16A-208ENST00000467838 THEMISQ8N1K5 641 aaPredicted RBP17.89■□□□□ 0.45
SEC16A-208ENST00000467838 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
SEC16A-208ENST00000467838 ARHGAP23Q9P227 1491 aa17.89■□□□□ 0.45
SEC16A-208ENST00000467838 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
SEC16A-208ENST00000467838 LTKP29376 864 aa17.88■□□□□ 0.45
SEC16A-208ENST00000467838 TXNDC2Q86VQ3 553 aa17.88■□□□□ 0.45
SEC16A-208ENST00000467838 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
SEC16A-208ENST00000467838 NASPP49321 788 aaPredicted RBP17.88■□□□□ 0.45
SEC16A-208ENST00000467838 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
SEC16A-208ENST00000467838 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
SEC16A-208ENST00000467838 CRB1P82279 1406 aa17.87■□□□□ 0.45
SEC16A-208ENST00000467838 SDSP20132 328 aa17.87■□□□□ 0.45
SEC16A-208ENST00000467838 DDX49Q9Y6V7 483 aaKnown RBP17.87■□□□□ 0.45
SEC16A-208ENST00000467838 DCTN1Q14203 1278 aa17.86■□□□□ 0.45
SEC16A-208ENST00000467838 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
SEC16A-208ENST00000467838 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
SEC16A-208ENST00000467838 OSBPL3Q9H4L5 887 aa17.86■□□□□ 0.45
SEC16A-208ENST00000467838 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
SEC16A-208ENST00000467838 PLEKHG1Q9ULL1 1385 aa17.86■□□□□ 0.45
SEC16A-208ENST00000467838 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
SEC16A-208ENST00000467838 N4BP2Q86UW6 1770 aaPredicted RBP17.86■□□□□ 0.45
SEC16A-208ENST00000467838 C16orf71Q8IYS4 520 aaPredicted RBP17.86■□□□□ 0.45
SEC16A-208ENST00000467838 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
SEC16A-208ENST00000467838 ZNF142P52746 1687 aaPredicted RBP17.85■□□□□ 0.45
SEC16A-208ENST00000467838 ST18O60284 1047 aa17.84■□□□□ 0.45
SEC16A-208ENST00000467838 REC8O95072 547 aa17.84■□□□□ 0.45
SEC16A-208ENST00000467838 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
SEC16A-208ENST00000467838 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.45
SEC16A-208ENST00000467838 LRRC37A3O60309 1634 aa17.83■□□□□ 0.45
SEC16A-208ENST00000467838 ARHGEF10O15013 1369 aa17.83■□□□□ 0.45
SEC16A-208ENST00000467838 ADAMTS13Q76LX8 1427 aa17.83■□□□□ 0.45
SEC16A-208ENST00000467838 HS1BP3Q53T59 392 aa17.83■□□□□ 0.44
SEC16A-208ENST00000467838 AEBP1Q8IUX7 1158 aa17.83■□□□□ 0.44
SEC16A-208ENST00000467838 USP31Q70CQ4 1352 aa17.83■□□□□ 0.44
SEC16A-208ENST00000467838 RRP9O43818 475 aaKnown RBP17.82■□□□□ 0.44
SEC16A-208ENST00000467838 ZSCAN30Q86W11 494 aa17.82■□□□□ 0.44
SEC16A-208ENST00000467838 MEIS3Q99687 375 aa17.82■□□□□ 0.44
SEC16A-208ENST00000467838 ZSCAN23Q3MJ62 389 aa17.82■□□□□ 0.44
SEC16A-208ENST00000467838 MCTP1Q6DN14 999 aa17.82■□□□□ 0.44
SEC16A-208ENST00000467838 FAM208AQ9UK61 1670 aaKnown RBP17.81■□□□□ 0.44
SEC16A-208ENST00000467838 ERC2O15083 957 aa17.81■□□□□ 0.44
SEC16A-208ENST00000467838 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
SEC16A-208ENST00000467838 HMMRO75330 724 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 TPM2P07951 284 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 PDLIM2Q96JY6 352 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 TTC21BQ7Z4L5 1316 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 SALL3Q9BXA9 1300 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 PKP1Q13835 747 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 ANP32BQ92688 251 aaKnown RBP17.8■□□□□ 0.44
SEC16A-208ENST00000467838 ZDHHC9Q9Y397 364 aa17.8■□□□□ 0.44
SEC16A-208ENST00000467838 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
SEC16A-208ENST00000467838 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.79■□□□□ 0.44
SEC16A-208ENST00000467838 SMARCA5O60264 1052 aaPredicted RBP17.79■□□□□ 0.44
SEC16A-208ENST00000467838 IL17RAQ96F46 866 aa17.79■□□□□ 0.44
SEC16A-208ENST00000467838 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
SEC16A-208ENST00000467838 USP6P35125 1406 aa17.78■□□□□ 0.44
SEC16A-208ENST00000467838 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
SEC16A-208ENST00000467838 PDE1AP54750 535 aa17.78■□□□□ 0.44
SEC16A-208ENST00000467838 CAVIN1Q6NZI2 390 aaKnown RBP17.78■□□□□ 0.44
SEC16A-208ENST00000467838 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms