RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 C6orf118Q5T5N4 469 aa7.88□□□□□ -1.15
VPS50-209ENST00000467326 RNF135Q8IUD6 432 aa7.88□□□□□ -1.15
VPS50-209ENST00000467326 TSEN34Q9BSV6 310 aaKnown RBP7.88□□□□□ -1.15
VPS50-209ENST00000467326 A6NJR5 290 aa7.87□□□□□ -1.15
VPS50-209ENST00000467326 ADH1AP07327 375 aa7.87□□□□□ -1.15
VPS50-209ENST00000467326 ERVK-9P63128 1117 aa7.87□□□□□ -1.15
VPS50-209ENST00000467326 RASSF7Q02833 373 aa7.87□□□□□ -1.15
VPS50-209ENST00000467326 PPFIA3O75145 1194 aa7.86□□□□□ -1.15
VPS50-209ENST00000467326 CC2D2BQ6DHV5 1058 aa7.86□□□□□ -1.15
VPS50-209ENST00000467326 FNBP4Q8N3X1 1017 aaPredicted RBP7.86□□□□□ -1.15
VPS50-209ENST00000467326 AGBL1Q96MI9 1066 aa7.86□□□□□ -1.15
VPS50-209ENST00000467326 CCDC85AQ96PX6 553 aaPredicted RBP7.86□□□□□ -1.15
VPS50-209ENST00000467326 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
VPS50-209ENST00000467326 GTF3C3Q9Y5Q9 886 aa7.86□□□□□ -1.15
VPS50-209ENST00000467326 IGHA1P01876 353 aa7.85□□□□□ -1.15
VPS50-209ENST00000467326 SCTRP47872 440 aa7.85□□□□□ -1.15
VPS50-209ENST00000467326 RELBQ01201 579 aa7.85□□□□□ -1.15
VPS50-209ENST00000467326 ALG2Q9H553 416 aa7.85□□□□□ -1.15
VPS50-209ENST00000467326 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
VPS50-209ENST00000467326 ADAMTS19Q8TE59 1207 aa7.84□□□□□ -1.15
VPS50-209ENST00000467326 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
VPS50-209ENST00000467326 PIK3CDO00329 1044 aa7.83□□□□□ -1.16
VPS50-209ENST00000467326 SPINT1O43278 529 aa7.83□□□□□ -1.16
VPS50-209ENST00000467326 MYCP01106 439 aaPredicted RBP7.83□□□□□ -1.16
VPS50-209ENST00000467326 ADD1P35611 737 aaKnown RBP7.83□□□□□ -1.16
VPS50-209ENST00000467326 CYP2U1Q7Z449 544 aa7.83□□□□□ -1.16
VPS50-209ENST00000467326 ESF1Q9H501 851 aaKnown RBP7.83□□□□□ -1.16
VPS50-209ENST00000467326 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
VPS50-209ENST00000467326 FOXK2Q01167 660 aa7.82□□□□□ -1.16
VPS50-209ENST00000467326 OXLD1Q5BKU9 147 aa7.82□□□□□ -1.16
VPS50-209ENST00000467326 PLPP7Q8NBV4 271 aa7.82□□□□□ -1.16
VPS50-209ENST00000467326 GLMNQ92990 594 aa7.82□□□□□ -1.16
VPS50-209ENST00000467326 CDCA7Q9BWT1 371 aaPredicted RBP7.82□□□□□ -1.16
VPS50-209ENST00000467326 CHIC2Q9UKJ5 165 aa7.82□□□□□ -1.16
VPS50-209ENST00000467326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
VPS50-209ENST00000467326 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
VPS50-209ENST00000467326 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
VPS50-209ENST00000467326 ZNF395Q9H8N7 513 aaPredicted RBP7.81□□□□□ -1.16
VPS50-209ENST00000467326 ADAMTS8Q9UP79 889 aa7.81□□□□□ -1.16
VPS50-209ENST00000467326 SOS2Q07890 1332 aaPredicted RBP7.8□□□□□ -1.16
VPS50-209ENST00000467326 TTLL8A6PVC2 850 aa7.8□□□□□ -1.16
VPS50-209ENST00000467326 PTGIRP43119 386 aa7.8□□□□□ -1.16
VPS50-209ENST00000467326 HDGFL1Q5TGJ6 251 aa7.8□□□□□ -1.16
VPS50-209ENST00000467326 KDF1Q8NAX2 398 aaPredicted RBP7.8□□□□□ -1.16
VPS50-209ENST00000467326 NFATC2IPQ8NCF5 419 aa7.8□□□□□ -1.16
VPS50-209ENST00000467326 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
VPS50-209ENST00000467326 POLMQ9NP87 494 aaPredicted RBP7.8□□□□□ -1.16
VPS50-209ENST00000467326 DNMT3AQ9Y6K1 912 aaPredicted RBP7.8□□□□□ -1.16
VPS50-209ENST00000467326 TRAK2O60296 914 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 SKIP12755 728 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 TSGA10IPQ3SY00 556 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 KANK3Q6NY19 840 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 UCN2Q96RP3 112 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 ARHGEF10LQ9HCE6 1279 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 DNMT3LQ9UJW3 386 aa7.79□□□□□ -1.16
VPS50-209ENST00000467326 USP4Q13107 963 aa7.78□□□□□ -1.16
VPS50-209ENST00000467326 SVOPQ8N4V2 548 aa7.78□□□□□ -1.16
VPS50-209ENST00000467326 SIRT1Q96EB6 747 aa7.78□□□□□ -1.16
VPS50-209ENST00000467326 CNTNAP3BQ96NU0 1288 aa7.78□□□□□ -1.16
VPS50-209ENST00000467326 CNTNAP3Q9BZ76 1288 aa7.78□□□□□ -1.16
VPS50-209ENST00000467326 USP17L5A8MUK1 530 aa7.77□□□□□ -1.17
VPS50-209ENST00000467326 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
VPS50-209ENST00000467326 CALR3Q96L12 384 aaKnown RBP7.77□□□□□ -1.17
VPS50-209ENST00000467326 MEN1O00255 615 aa7.76□□□□□ -1.17
VPS50-209ENST00000467326 MARSP56192 900 aaKnown RBP7.76□□□□□ -1.17
VPS50-209ENST00000467326 CLN3Q13286 438 aa7.76□□□□□ -1.17
VPS50-209ENST00000467326 NCOA4Q13772 614 aa7.76□□□□□ -1.17
VPS50-209ENST00000467326 EML3Q32P44 896 aa7.76□□□□□ -1.17
VPS50-209ENST00000467326 FOXD4L5Q5VV16 416 aaPredicted RBP7.76□□□□□ -1.17
VPS50-209ENST00000467326 RNF217Q8TC41 542 aa7.76□□□□□ -1.17
VPS50-209ENST00000467326 SCARF2Q96GP6 870 aaPredicted RBP7.76□□□□□ -1.17
VPS50-209ENST00000467326 RAB6BQ9NRW1 208 aa7.76□□□□□ -1.17
VPS50-209ENST00000467326 A0A1W2PRU2 124 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 ATP9BO43861 1147 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 GNRH1P01148 92 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
VPS50-209ENST00000467326 NANOS1Q8WY41 292 aaKnown RBP7.75□□□□□ -1.17
VPS50-209ENST00000467326 FIGNL2A6NMB9 653 aa7.74□□□□□ -1.17
VPS50-209ENST00000467326 GPAT2Q6NUI2 795 aa7.74□□□□□ -1.17
VPS50-209ENST00000467326 TBC1D9Q6ZT07 1266 aa7.74□□□□□ -1.17
VPS50-209ENST00000467326 DEPDC4Q8N2C3 294 aa7.74□□□□□ -1.17
VPS50-209ENST00000467326 NLRP3Q96P20 1036 aa7.74□□□□□ -1.17
VPS50-209ENST00000467326 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
VPS50-209ENST00000467326 ZMYND15Q9H091 742 aa7.74□□□□□ -1.17
VPS50-209ENST00000467326 LZTS3O60299 673 aaPredicted RBP7.73□□□□□ -1.17
VPS50-209ENST00000467326 XP32Q5T750 250 aa7.73□□□□□ -1.17
VPS50-209ENST00000467326 PLEKHM2Q8IWE5 1019 aa7.73□□□□□ -1.17
VPS50-209ENST00000467326 ZNF777Q9ULD5 760 aaPredicted RBP7.73□□□□□ -1.17
VPS50-209ENST00000467326 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
VPS50-209ENST00000467326 IL2RAP01589 272 aa7.72□□□□□ -1.17
VPS50-209ENST00000467326 GPC1P35052 558 aa7.72□□□□□ -1.17
VPS50-209ENST00000467326 RNF144AP50876 292 aaPredicted RBP7.72□□□□□ -1.17
VPS50-209ENST00000467326 PTSQ03393 145 aa7.72□□□□□ -1.17
VPS50-209ENST00000467326 ESCO1Q5FWF5 840 aa7.72□□□□□ -1.17
VPS50-209ENST00000467326 C14orf37Q86TY3 774 aa7.72□□□□□ -1.17
VPS50-209ENST00000467326 IRS1P35568 1242 aa7.71□□□□□ -1.18
VPS50-209ENST00000467326 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms