RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 LTV1Q96GA3 475 aaPredicted RBP12.99□□□□□ -0.33
UFD1-206ENST00000466373 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
UFD1-206ENST00000466373 GZF1Q9H116 711 aaPredicted RBP12.99□□□□□ -0.33
UFD1-206ENST00000466373 SMARCA5O60264 1052 aaPredicted RBP12.98□□□□□ -0.33
UFD1-206ENST00000466373 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
UFD1-206ENST00000466373 G2E3Q7L622 706 aa12.98□□□□□ -0.33
UFD1-206ENST00000466373 EYA1Q99502 592 aa12.98□□□□□ -0.33
UFD1-206ENST00000466373 MSH6P52701 1360 aa12.98□□□□□ -0.33
UFD1-206ENST00000466373 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
UFD1-206ENST00000466373 RIMS1Q86UR5 1692 aaKnown RBP12.98□□□□□ -0.33
UFD1-206ENST00000466373 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
UFD1-206ENST00000466373 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
UFD1-206ENST00000466373 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
UFD1-206ENST00000466373 DCTPP1Q9H773 170 aa12.97□□□□□ -0.33
UFD1-206ENST00000466373 CHMP5Q9NZZ3 219 aa12.97□□□□□ -0.33
UFD1-206ENST00000466373 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
UFD1-206ENST00000466373 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
UFD1-206ENST00000466373 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
UFD1-206ENST00000466373 PLEKHM2Q8IWE5 1019 aa12.97□□□□□ -0.33
UFD1-206ENST00000466373 RGS12O14924 1447 aa12.97□□□□□ -0.33
UFD1-206ENST00000466373 TOPAZ1Q8N9V7 1692 aa12.96□□□□□ -0.33
UFD1-206ENST00000466373 HSP90AB1P08238 724 aaKnown RBP12.96□□□□□ -0.33
UFD1-206ENST00000466373 CEP85Q6P2H3 762 aa12.96□□□□□ -0.33
UFD1-206ENST00000466373 KIF2CQ99661 725 aa12.96□□□□□ -0.33
UFD1-206ENST00000466373 PLEKHG5O94827 1062 aa12.96□□□□□ -0.34
UFD1-206ENST00000466373 MCM4P33991 863 aa12.96□□□□□ -0.34
UFD1-206ENST00000466373 TBX22Q9Y458 520 aa12.96□□□□□ -0.34
UFD1-206ENST00000466373 CRB1P82279 1406 aa12.95□□□□□ -0.34
UFD1-206ENST00000466373 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
UFD1-206ENST00000466373 KCNA6P17658 529 aa12.95□□□□□ -0.34
UFD1-206ENST00000466373 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
UFD1-206ENST00000466373 ANKRD44Q8N8A2 993 aa12.95□□□□□ -0.34
UFD1-206ENST00000466373 FLT4P35916 1363 aa12.95□□□□□ -0.34
UFD1-206ENST00000466373 HSP90AA1P07900 732 aaKnown RBP12.95□□□□□ -0.34
UFD1-206ENST00000466373 TTC21AQ8NDW8 1320 aa12.95□□□□□ -0.34
UFD1-206ENST00000466373 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
UFD1-206ENST00000466373 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
UFD1-206ENST00000466373 CDC45O75419 566 aa12.94□□□□□ -0.34
UFD1-206ENST00000466373 ATP10DQ9P241 1426 aa12.94□□□□□ -0.34
UFD1-206ENST00000466373 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
UFD1-206ENST00000466373 THEMISQ8N1K5 641 aaPredicted RBP12.94□□□□□ -0.34
UFD1-206ENST00000466373 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
UFD1-206ENST00000466373 CEP170BQ9Y4F5 1589 aaPredicted RBP12.94□□□□□ -0.34
UFD1-206ENST00000466373 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
UFD1-206ENST00000466373 USHBP1Q8N6Y0 703 aa12.93□□□□□ -0.34
UFD1-206ENST00000466373 PTPRCP08575 1304 aa12.93□□□□□ -0.34
UFD1-206ENST00000466373 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
UFD1-206ENST00000466373 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
UFD1-206ENST00000466373 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
UFD1-206ENST00000466373 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
UFD1-206ENST00000466373 RGPD1P0DJD0 1748 aa12.92□□□□□ -0.34
UFD1-206ENST00000466373 SNX21Q969T3 373 aa12.92□□□□□ -0.34
UFD1-206ENST00000466373 DIP2AQ14689 1571 aa12.92□□□□□ -0.34
UFD1-206ENST00000466373 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
UFD1-206ENST00000466373 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
UFD1-206ENST00000466373 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
UFD1-206ENST00000466373 HOXC9P31274 260 aa12.91□□□□□ -0.34
UFD1-206ENST00000466373 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
UFD1-206ENST00000466373 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
UFD1-206ENST00000466373 SETD1BQ9UPS6 1966 aaKnown RBP12.9□□□□□ -0.34
UFD1-206ENST00000466373 TRAK2O60296 914 aa12.9□□□□□ -0.34
UFD1-206ENST00000466373 SDSP20132 328 aa12.9□□□□□ -0.34
UFD1-206ENST00000466373 TSHZ3Q63HK5 1081 aa12.9□□□□□ -0.34
UFD1-206ENST00000466373 KDRP35968 1356 aa12.9□□□□□ -0.34
UFD1-206ENST00000466373 EXOC6BQ9Y2D4 811 aa12.9□□□□□ -0.34
UFD1-206ENST00000466373 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
UFD1-206ENST00000466373 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.35
UFD1-206ENST00000466373 TNPO1Q92973 898 aaKnown RBP12.89□□□□□ -0.35
UFD1-206ENST00000466373 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
UFD1-206ENST00000466373 K7ELQ4 463 aaPredicted RBP12.89□□□□□ -0.35
UFD1-206ENST00000466373 IL17REQ8NFR9 667 aa12.89□□□□□ -0.35
UFD1-206ENST00000466373 DDIT3P35638 169 aa12.88□□□□□ -0.35
UFD1-206ENST00000466373 FLIIQ13045 1269 aa12.88□□□□□ -0.35
UFD1-206ENST00000466373 SLIT1O75093 1534 aa12.88□□□□□ -0.35
UFD1-206ENST00000466373 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
UFD1-206ENST00000466373 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
UFD1-206ENST00000466373 CCT4P50991 539 aaKnown RBP12.87□□□□□ -0.35
UFD1-206ENST00000466373 HMMRO75330 724 aa12.87□□□□□ -0.35
UFD1-206ENST00000466373 GNAI2P04899 355 aa12.86□□□□□ -0.35
UFD1-206ENST00000466373 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
UFD1-206ENST00000466373 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
UFD1-206ENST00000466373 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
UFD1-206ENST00000466373 PNMA6EA0A0J9YXQ4 647 aa12.85□□□□□ -0.35
UFD1-206ENST00000466373 FER1L4A9Z1Z3 1794 aa12.85□□□□□ -0.35
UFD1-206ENST00000466373 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
UFD1-206ENST00000466373 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
UFD1-206ENST00000466373 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
UFD1-206ENST00000466373 AK9Q5TCS8 1911 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 DDX11L8A8MPP1 907 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 SSFA2P28290 1259 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
UFD1-206ENST00000466373 RAB3GAP1Q15042 981 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
UFD1-206ENST00000466373 CASC1Q6TDU7 716 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 PANK2Q9BZ23 570 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 XRCC6P12956 609 aaKnown RBP eCLIP12.84□□□□□ -0.351e-14■■□□□ 12.5
UFD1-206ENST00000466373 PDE1AP54750 535 aa12.84□□□□□ -0.35
UFD1-206ENST00000466373 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
UFD1-206ENST00000466373 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
UFD1-206ENST00000466373 MAP3K5Q99683 1374 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms