RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
SLX4-202ENST00000466154 ABTB2Q8N961 1025 aa20.34■□□□□ 0.85
SLX4-202ENST00000466154 MSH6P52701 1360 aa20.33■□□□□ 0.84
SLX4-202ENST00000466154 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
SLX4-202ENST00000466154 CD2BP2O95400 341 aaKnown RBP20.32■□□□□ 0.84
SLX4-202ENST00000466154 GSPT1P15170 499 aaKnown RBP20.32■□□□□ 0.84
SLX4-202ENST00000466154 KCNA6P17658 529 aa20.31■□□□□ 0.84
SLX4-202ENST00000466154 MCM4P33991 863 aa20.31■□□□□ 0.84
SLX4-202ENST00000466154 TSHZ3Q63HK5 1081 aa20.31■□□□□ 0.84
SLX4-202ENST00000466154 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
SLX4-202ENST00000466154 TECPR2O15040 1411 aa20.3■□□□□ 0.84
SLX4-202ENST00000466154 CDC45O75419 566 aa20.3■□□□□ 0.84
SLX4-202ENST00000466154 HAP1P54257 671 aaPredicted RBP20.3■□□□□ 0.84
SLX4-202ENST00000466154 FKBP5Q13451 457 aaPredicted RBP20.3■□□□□ 0.84
SLX4-202ENST00000466154 LMOD2Q6P5Q4 547 aa20.3■□□□□ 0.84
SLX4-202ENST00000466154 STK31Q9BXU1 1019 aa20.3■□□□□ 0.84
SLX4-202ENST00000466154 DLG5Q8TDM6 1919 aa20.3■□□□□ 0.84
SLX4-202ENST00000466154 PLEKHG1Q9ULL1 1385 aa20.29■□□□□ 0.84
SLX4-202ENST00000466154 CEP85Q6P2H3 762 aa20.29■□□□□ 0.84
SLX4-202ENST00000466154 PIK3R4Q99570 1358 aa20.29■□□□□ 0.84
SLX4-202ENST00000466154 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
SLX4-202ENST00000466154 DCTPP1Q9H773 170 aa20.28■□□□□ 0.84
SLX4-202ENST00000466154 EXOC6BQ9Y2D4 811 aa20.28■□□□□ 0.84
SLX4-202ENST00000466154 ITSN1Q15811 1721 aa20.28■□□□□ 0.84
SLX4-202ENST00000466154 RBM25P49756 843 aaKnown RBP20.28■□□□□ 0.84
SLX4-202ENST00000466154 THEMISQ8N1K5 641 aaPredicted RBP20.28■□□□□ 0.84
SLX4-202ENST00000466154 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.84
SLX4-202ENST00000466154 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.84
SLX4-202ENST00000466154 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
SLX4-202ENST00000466154 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
SLX4-202ENST00000466154 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
SLX4-202ENST00000466154 EIF2S2P20042 333 aaKnown RBP20.25■□□□□ 0.83
SLX4-202ENST00000466154 XPCQ01831 940 aaPredicted RBP20.25■□□□□ 0.83
SLX4-202ENST00000466154 FLT4P35916 1363 aa20.25■□□□□ 0.83
SLX4-202ENST00000466154 TRAK2O60296 914 aa20.25■□□□□ 0.83
SLX4-202ENST00000466154 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
SLX4-202ENST00000466154 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
SLX4-202ENST00000466154 MON2Q7Z3U7 1717 aa20.24■□□□□ 0.83
SLX4-202ENST00000466154 C3P01024 1663 aa20.24■□□□□ 0.83
SLX4-202ENST00000466154 RPAP2Q8IXW5 612 aaPredicted RBP20.23■□□□□ 0.83
SLX4-202ENST00000466154 KIF2CQ99661 725 aa20.23■□□□□ 0.83
SLX4-202ENST00000466154 TBX22Q9Y458 520 aa20.23■□□□□ 0.83
SLX4-202ENST00000466154 UBR1Q8IWV7 1749 aa20.23■□□□□ 0.83
SLX4-202ENST00000466154 SDSP20132 328 aa20.23■□□□□ 0.83
SLX4-202ENST00000466154 PTPRCP08575 1304 aa20.22■□□□□ 0.83
SLX4-202ENST00000466154 TTC21AQ8NDW8 1320 aa20.22■□□□□ 0.83
SLX4-202ENST00000466154 RTL1A6NKG5 1358 aa20.22■□□□□ 0.83
SLX4-202ENST00000466154 GNAT3A8MTJ3 354 aa20.22■□□□□ 0.83
SLX4-202ENST00000466154 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
SLX4-202ENST00000466154 HOXC9P31274 260 aa20.21■□□□□ 0.83
SLX4-202ENST00000466154 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
SLX4-202ENST00000466154 TNPO1Q92973 898 aaKnown RBP20.21■□□□□ 0.83
SLX4-202ENST00000466154 HMMRO75330 724 aa20.21■□□□□ 0.83
SLX4-202ENST00000466154 K7ELQ4 463 aaPredicted RBP20.2■□□□□ 0.82
SLX4-202ENST00000466154 FLIIQ13045 1269 aa20.2■□□□□ 0.82
SLX4-202ENST00000466154 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
SLX4-202ENST00000466154 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
SLX4-202ENST00000466154 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
SLX4-202ENST00000466154 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
SLX4-202ENST00000466154 CRB1P82279 1406 aa20.19■□□□□ 0.82
SLX4-202ENST00000466154 RILPL2Q969X0 211 aa20.19■□□□□ 0.82
SLX4-202ENST00000466154 NOL8Q76FK4 1167 aaKnown RBP20.19■□□□□ 0.82
SLX4-202ENST00000466154 AKAP12Q02952 1782 aa20.19■□□□□ 0.82
SLX4-202ENST00000466154 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 PEAK1Q9H792 1746 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 GNAI2P04899 355 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 ARHGEF10O15013 1369 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 RGS12O14924 1447 aa20.18■□□□□ 0.82
SLX4-202ENST00000466154 PSME1Q06323 249 aa20.17■□□□□ 0.82
SLX4-202ENST00000466154 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
SLX4-202ENST00000466154 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
SLX4-202ENST00000466154 SNX21Q969T3 373 aa20.17■□□□□ 0.82
SLX4-202ENST00000466154 ANXA1P04083 346 aa20.17■□□□□ 0.82
SLX4-202ENST00000466154 CCT4P50991 539 aaKnown RBP20.17■□□□□ 0.82
SLX4-202ENST00000466154 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
SLX4-202ENST00000466154 PANK2Q9BZ23 570 aa20.16■□□□□ 0.82
SLX4-202ENST00000466154 ATP10DQ9P241 1426 aa20.16■□□□□ 0.82
SLX4-202ENST00000466154 CEP170BQ9Y4F5 1589 aaPredicted RBP20.16■□□□□ 0.82
SLX4-202ENST00000466154 SSFA2P28290 1259 aa20.16■□□□□ 0.82
SLX4-202ENST00000466154 HDGFL1Q5TGJ6 251 aa20.16■□□□□ 0.82
SLX4-202ENST00000466154 FOXD4L5Q5VV16 416 aaPredicted RBP20.16■□□□□ 0.82
SLX4-202ENST00000466154 FOXD4L4Q8WXT5 416 aaPredicted RBP20.16■□□□□ 0.82
SLX4-202ENST00000466154 PHAXQ9H814 394 aaKnown RBP20.16■□□□□ 0.82
SLX4-202ENST00000466154 PNMA6EA0A0J9YXQ4 647 aa20.15■□□□□ 0.82
SLX4-202ENST00000466154 IL1RAPL2Q9NP60 686 aa20.15■□□□□ 0.82
SLX4-202ENST00000466154 KNDC1Q76NI1 1749 aa20.15■□□□□ 0.82
SLX4-202ENST00000466154 LRRFIP2Q9Y608 721 aaKnown RBP20.15■□□□□ 0.82
SLX4-202ENST00000466154 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
SLX4-202ENST00000466154 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
SLX4-202ENST00000466154 PHF8Q9UPP1 1060 aa20.15■□□□□ 0.82
SLX4-202ENST00000466154 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.82
SLX4-202ENST00000466154 DDX11L8A8MPP1 907 aa20.14■□□□□ 0.81
SLX4-202ENST00000466154 GBP4Q96PP9 640 aa20.14■□□□□ 0.81
SLX4-202ENST00000466154 NCLP19338 710 aaKnown RBP20.14■□□□□ 0.81
SLX4-202ENST00000466154 MAP4K4O95819 1239 aaPredicted RBP20.13■□□□□ 0.81
SLX4-202ENST00000466154 TAF7Q15545 349 aaPredicted RBP20.13■□□□□ 0.81
SLX4-202ENST00000466154 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
SLX4-202ENST00000466154 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms