RNA–Protein interactions for RNA: ENST00000465960.2

CAPN13-205, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 1,215 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-205ENST00000465960 EXOSC9Q06265 439 aaKnown RBP12.03□□□□□ -0.48
CAPN13-205ENST00000465960 PSME1Q06323 249 aa12.03□□□□□ -0.48
CAPN13-205ENST00000465960 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
CAPN13-205ENST00000465960 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
CAPN13-205ENST00000465960 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
CAPN13-205ENST00000465960 ZKSCAN2Q63HK3 967 aa12.02□□□□□ -0.49
CAPN13-205ENST00000465960 IP6K1Q92551 441 aa12.02□□□□□ -0.49
CAPN13-205ENST00000465960 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
CAPN13-205ENST00000465960 CRB1P82279 1406 aa12.02□□□□□ -0.49
CAPN13-205ENST00000465960 PXDNQ92626 1479 aa12.02□□□□□ -0.49
CAPN13-205ENST00000465960 FAM208AQ9UK61 1670 aaKnown RBP12.01□□□□□ -0.49
CAPN13-205ENST00000465960 CRYBG1Q9Y4K1 1723 aa12.01□□□□□ -0.49
CAPN13-205ENST00000465960 TCERG1O14776 1098 aaKnown RBP12.01□□□□□ -0.49
CAPN13-205ENST00000465960 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
CAPN13-205ENST00000465960 FNBP4Q8N3X1 1017 aaPredicted RBP12.01□□□□□ -0.49
CAPN13-205ENST00000465960 ARHGAP45Q92619 1136 aa12.01□□□□□ -0.49
CAPN13-205ENST00000465960 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
CAPN13-205ENST00000465960 EYA1Q99502 592 aa12.01□□□□□ -0.49
CAPN13-205ENST00000465960 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
CAPN13-205ENST00000465960 OVOS2A0A0G2JMS6 1433 aa12.01□□□□□ -0.49
CAPN13-205ENST00000465960 IPO8O15397 1037 aaKnown RBP12□□□□□ -0.49
CAPN13-205ENST00000465960 CLUAP1Q96AJ1 413 aa12□□□□□ -0.49
CAPN13-205ENST00000465960 SMC4Q9NTJ3 1288 aa12□□□□□ -0.49
CAPN13-205ENST00000465960 BABAM1Q9NWV8 329 aa12□□□□□ -0.49
CAPN13-205ENST00000465960 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
CAPN13-205ENST00000465960 EP400Q96L91 3159 aa12□□□□□ -0.49
CAPN13-205ENST00000465960 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
CAPN13-205ENST00000465960 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
CAPN13-205ENST00000465960 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
CAPN13-205ENST00000465960 SSH1Q8WYL5 1049 aa11.99□□□□□ -0.49
CAPN13-205ENST00000465960 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
CAPN13-205ENST00000465960 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
CAPN13-205ENST00000465960 CHL1O00533 1208 aa11.98□□□□□ -0.49
CAPN13-205ENST00000465960 MVPQ14764 893 aaKnown RBP11.98□□□□□ -0.49
CAPN13-205ENST00000465960 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
CAPN13-205ENST00000465960 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
CAPN13-205ENST00000465960 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
CAPN13-205ENST00000465960 MAP3K5Q99683 1374 aa11.97□□□□□ -0.49
CAPN13-205ENST00000465960 VAMP4O75379 141 aa11.97□□□□□ -0.49
CAPN13-205ENST00000465960 KRT28Q7Z3Y7 464 aa11.97□□□□□ -0.49
CAPN13-205ENST00000465960 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
CAPN13-205ENST00000465960 CPDO75976 1380 aa11.96□□□□□ -0.49
CAPN13-205ENST00000465960 FOXO3O43524 673 aa11.96□□□□□ -0.49
CAPN13-205ENST00000465960 GCP02774 474 aa11.96□□□□□ -0.49
CAPN13-205ENST00000465960 TRIM27P14373 513 aa11.96□□□□□ -0.49
CAPN13-205ENST00000465960 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
CAPN13-205ENST00000465960 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
CAPN13-205ENST00000465960 DDX19BQ9UMR2 479 aa11.96□□□□□ -0.49
CAPN13-205ENST00000465960 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.49
CAPN13-205ENST00000465960 ADAMTS7Q9UKP4 1686 aa11.96□□□□□ -0.5
CAPN13-205ENST00000465960 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
CAPN13-205ENST00000465960 SOX12O15370 315 aa11.95□□□□□ -0.5
CAPN13-205ENST00000465960 MTHFSDQ2M296 383 aaKnown RBP11.95□□□□□ -0.5
CAPN13-205ENST00000465960 PANK1Q8TE04 598 aa11.95□□□□□ -0.5
CAPN13-205ENST00000465960 GJD4Q96KN9 370 aaPredicted RBP11.95□□□□□ -0.5
CAPN13-205ENST00000465960 ATRNO75882 1429 aa11.94□□□□□ -0.5
CAPN13-205ENST00000465960 ABCC4O15439 1325 aa11.94□□□□□ -0.5
CAPN13-205ENST00000465960 RLBP1P12271 317 aa11.94□□□□□ -0.5
CAPN13-205ENST00000465960 TWISTNBQ3B726 338 aaPredicted RBP11.94□□□□□ -0.5
CAPN13-205ENST00000465960 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
CAPN13-205ENST00000465960 RTF1Q92541 710 aaKnown RBP11.94□□□□□ -0.5
CAPN13-205ENST00000465960 THUMPD2Q9BTF0 503 aaKnown RBP11.94□□□□□ -0.5
CAPN13-205ENST00000465960 COG6Q9Y2V7 657 aa11.94□□□□□ -0.5
CAPN13-205ENST00000465960 COL18A1P39060 1754 aa11.94□□□□□ -0.5
CAPN13-205ENST00000465960 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
CAPN13-205ENST00000465960 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
CAPN13-205ENST00000465960 NUTM2GQ5VZR2 741 aa11.93□□□□□ -0.5
CAPN13-205ENST00000465960 DEFB132Q7Z7B7 95 aa11.93□□□□□ -0.5
CAPN13-205ENST00000465960 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
CAPN13-205ENST00000465960 SOS2Q07890 1332 aaPredicted RBP11.92□□□□□ -0.5
CAPN13-205ENST00000465960 SPATA31A3Q5VYP0 1347 aa11.92□□□□□ -0.5
CAPN13-205ENST00000465960 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
CAPN13-205ENST00000465960 AMOTQ4VCS5 1084 aa11.92□□□□□ -0.5
CAPN13-205ENST00000465960 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
CAPN13-205ENST00000465960 NOB1Q9ULX3 412 aaKnown RBP11.92□□□□□ -0.5
CAPN13-205ENST00000465960 PTPRCP08575 1304 aa11.91□□□□□ -0.5
CAPN13-205ENST00000465960 ERBB3P21860 1342 aa11.91□□□□□ -0.5
CAPN13-205ENST00000465960 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
CAPN13-205ENST00000465960 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
CAPN13-205ENST00000465960 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
CAPN13-205ENST00000465960 N4BP2Q86UW6 1770 aaPredicted RBP11.9□□□□□ -0.5
CAPN13-205ENST00000465960 MCM10Q7L590 875 aa11.9□□□□□ -0.5
CAPN13-205ENST00000465960 TSPYL6Q8N831 410 aa11.9□□□□□ -0.5
CAPN13-205ENST00000465960 C8orf58Q8NAV2 365 aa11.9□□□□□ -0.5
CAPN13-205ENST00000465960 CHMP4AQ9BY43 222 aa11.9□□□□□ -0.5
CAPN13-205ENST00000465960 RWDD1Q9H446 243 aaPredicted RBP11.9□□□□□ -0.5
CAPN13-205ENST00000465960 LAS1LQ9Y4W2 734 aaKnown RBP11.9□□□□□ -0.5
CAPN13-205ENST00000465960 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
CAPN13-205ENST00000465960 PARP4Q9UKK3 1724 aaKnown RBP11.89□□□□□ -0.51
CAPN13-205ENST00000465960 HOXB7P09629 217 aa11.89□□□□□ -0.51
CAPN13-205ENST00000465960 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
CAPN13-205ENST00000465960 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
CAPN13-205ENST00000465960 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
CAPN13-205ENST00000465960 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
CAPN13-205ENST00000465960 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
CAPN13-205ENST00000465960 AKAP4Q5JQC9 854 aa11.88□□□□□ -0.51
CAPN13-205ENST00000465960 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
CAPN13-205ENST00000465960 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
CAPN13-205ENST00000465960 MRC1P22897 1456 aa11.88□□□□□ -0.51
CAPN13-205ENST00000465960 BCL9LQ86UU0 1499 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms