RNA–Protein interactions for RNA: ENST00000465937.1

LIMK2-207, Transcript of LIM domain kinase 2, humanhuman

TSL 3

Gene LIMK2, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-207ENST00000465937 RGPD4Q7Z3J3 1758 aa18.17■□□□□ 0.5
LIMK2-207ENST00000465937 EZH2Q15910 746 aaKnown RBP18.16■□□□□ 0.5
LIMK2-207ENST00000465937 PLEKHG2Q9H7P9 1386 aa18.16■□□□□ 0.5
LIMK2-207ENST00000465937 NHSQ6T4R5 1651 aa18.15■□□□□ 0.5
LIMK2-207ENST00000465937 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
LIMK2-207ENST00000465937 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
LIMK2-207ENST00000465937 RREB1Q92766 1687 aa18.15■□□□□ 0.5
LIMK2-207ENST00000465937 TATP17735 454 aaPredicted RBP18.14■□□□□ 0.49
LIMK2-207ENST00000465937 PKD1L3Q7Z443 1732 aa18.14■□□□□ 0.49
LIMK2-207ENST00000465937 KCNQ2O43526 872 aa18.13■□□□□ 0.49
LIMK2-207ENST00000465937 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
LIMK2-207ENST00000465937 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.13■□□□□ 0.49
LIMK2-207ENST00000465937 IL13P35225 146 aa18.12■□□□□ 0.49
LIMK2-207ENST00000465937 MTHFSP49914 203 aa18.12■□□□□ 0.49
LIMK2-207ENST00000465937 DDX54Q8TDD1 881 aaKnown RBP18.12■□□□□ 0.49
LIMK2-207ENST00000465937 PROM2Q8N271 834 aa18.11■□□□□ 0.49
LIMK2-207ENST00000465937 CYP27B1O15528 508 aa18.1■□□□□ 0.49
LIMK2-207ENST00000465937 NUP188Q5SRE5 1749 aa18.09■□□□□ 0.49
LIMK2-207ENST00000465937 KDRP35968 1356 aa18.09■□□□□ 0.49
LIMK2-207ENST00000465937 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
LIMK2-207ENST00000465937 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
LIMK2-207ENST00000465937 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
LIMK2-207ENST00000465937 KAT6BQ8WYB5 2073 aa18.08■□□□□ 0.49
LIMK2-207ENST00000465937 BTAF1O14981 1849 aa18.08■□□□□ 0.48
LIMK2-207ENST00000465937 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
LIMK2-207ENST00000465937 ACSBG1Q96GR2 724 aa18.08■□□□□ 0.48
LIMK2-207ENST00000465937 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
LIMK2-207ENST00000465937 DOT1LQ8TEK3 1739 aa18.06■□□□□ 0.48
LIMK2-207ENST00000465937 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
LIMK2-207ENST00000465937 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
LIMK2-207ENST00000465937 AEBP1Q8IUX7 1158 aa18.04■□□□□ 0.48
LIMK2-207ENST00000465937 TXNRD1Q16881 649 aa18.03■□□□□ 0.48
LIMK2-207ENST00000465937 TOGARAM1Q9Y4F4 1720 aa18.03■□□□□ 0.48
LIMK2-207ENST00000465937 PHKG2P15735 406 aa18.02■□□□□ 0.48
LIMK2-207ENST00000465937 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
LIMK2-207ENST00000465937 PPP2R1AP30153 589 aa18.01■□□□□ 0.47
LIMK2-207ENST00000465937 SULT6B1Q6IMI4 303 aa18.01■□□□□ 0.47
LIMK2-207ENST00000465937 AMOTQ4VCS5 1084 aa18■□□□□ 0.47
LIMK2-207ENST00000465937 IFNL2Q8IZJ0 200 aa18■□□□□ 0.47
LIMK2-207ENST00000465937 LY75O60449 1722 aa18■□□□□ 0.47
LIMK2-207ENST00000465937 ITGB4P16144 1822 aa18■□□□□ 0.47
LIMK2-207ENST00000465937 PAPPAQ13219 1627 aa17.99■□□□□ 0.47
LIMK2-207ENST00000465937 R3HDM1Q15032 1099 aaKnown RBP17.99■□□□□ 0.47
LIMK2-207ENST00000465937 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
LIMK2-207ENST00000465937 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
LIMK2-207ENST00000465937 ANO8Q9HCE9 1232 aaPredicted RBP17.99■□□□□ 0.47
LIMK2-207ENST00000465937 PSDA5PKW4 1024 aaPredicted RBP17.98■□□□□ 0.47
LIMK2-207ENST00000465937 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
LIMK2-207ENST00000465937 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
LIMK2-207ENST00000465937 SRCAPQ6ZRS2 3230 aa17.97■□□□□ 0.47
LIMK2-207ENST00000465937 CNGB1Q14028 1251 aaPredicted RBP17.96■□□□□ 0.47
LIMK2-207ENST00000465937 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
LIMK2-207ENST00000465937 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
LIMK2-207ENST00000465937 PIGBQ92521 554 aa17.95■□□□□ 0.46
LIMK2-207ENST00000465937 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
LIMK2-207ENST00000465937 DCAF5Q96JK2 942 aa17.94■□□□□ 0.46
LIMK2-207ENST00000465937 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
LIMK2-207ENST00000465937 LRP5O75197 1615 aa17.94■□□□□ 0.46
LIMK2-207ENST00000465937 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
LIMK2-207ENST00000465937 HMOX1P09601 288 aa17.93■□□□□ 0.46
LIMK2-207ENST00000465937 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
LIMK2-207ENST00000465937 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
LIMK2-207ENST00000465937 SLC15A2Q16348 729 aa17.92■□□□□ 0.46
LIMK2-207ENST00000465937 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
LIMK2-207ENST00000465937 CASZ1Q86V15 1759 aa17.91■□□□□ 0.46
LIMK2-207ENST00000465937 RALBP1Q15311 655 aa17.91■□□□□ 0.46
LIMK2-207ENST00000465937 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
LIMK2-207ENST00000465937 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
LIMK2-207ENST00000465937 AKAP4Q5JQC9 854 aa17.9■□□□□ 0.46
LIMK2-207ENST00000465937 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
LIMK2-207ENST00000465937 PALLDQ8WX93 1383 aa17.9■□□□□ 0.46
LIMK2-207ENST00000465937 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
LIMK2-207ENST00000465937 ZNF827Q17R98 1081 aa17.89■□□□□ 0.45
LIMK2-207ENST00000465937 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
LIMK2-207ENST00000465937 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
LIMK2-207ENST00000465937 STK32BQ9NY57 414 aa17.89■□□□□ 0.45
LIMK2-207ENST00000465937 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
LIMK2-207ENST00000465937 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
LIMK2-207ENST00000465937 ATG3Q9NT62 314 aa17.88■□□□□ 0.45
LIMK2-207ENST00000465937 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
LIMK2-207ENST00000465937 QSER1Q2KHR3 1735 aa17.88■□□□□ 0.45
LIMK2-207ENST00000465937 TAF1LQ8IZX4 1826 aa17.87■□□□□ 0.45
LIMK2-207ENST00000465937 KCNQ4P56696 695 aa17.87■□□□□ 0.45
LIMK2-207ENST00000465937 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
LIMK2-207ENST00000465937 PDGFDQ9GZP0 370 aaPredicted RBP17.87■□□□□ 0.45
LIMK2-207ENST00000465937 CCNL1Q9UK58 526 aaPredicted RBP17.87■□□□□ 0.45
LIMK2-207ENST00000465937 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
LIMK2-207ENST00000465937 FCHSD2O94868 740 aa17.86■□□□□ 0.45
LIMK2-207ENST00000465937 MRC1P22897 1456 aa17.85■□□□□ 0.45
LIMK2-207ENST00000465937 ZNF831Q5JPB2 1677 aa17.85■□□□□ 0.45
LIMK2-207ENST00000465937 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
LIMK2-207ENST00000465937 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
LIMK2-207ENST00000465937 RNMTO43148 476 aaKnown RBP17.84■□□□□ 0.45
LIMK2-207ENST00000465937 HMGB2P26583 209 aaKnown RBP17.84■□□□□ 0.45
LIMK2-207ENST00000465937 SIK1P57059 783 aa17.84■□□□□ 0.45
LIMK2-207ENST00000465937 LGR6Q9HBX8 967 aa17.84■□□□□ 0.45
LIMK2-207ENST00000465937 VIRMAQ69YN4 1812 aaKnown RBP17.84■□□□□ 0.45
LIMK2-207ENST00000465937 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
LIMK2-207ENST00000465937 C5P01031 1676 aa17.83■□□□□ 0.45
LIMK2-207ENST00000465937 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms