RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 PTF1AQ7RTS3 328 aa35.18■■■■□ 3.22
SMC4-206ENST00000465903 DDX54Q8TDD1 881 aaKnown RBP35.17■■■■□ 3.22
SMC4-206ENST00000465903 APBA3O96018 575 aa35.16■■■■□ 3.22
SMC4-206ENST00000465903 IGSF1Q8N6C5 1336 aa35.15■■■■□ 3.22
SMC4-206ENST00000465903 BCL11BQ9C0K0 894 aaPredicted RBP35.14■■■■□ 3.22
SMC4-206ENST00000465903 PKD1L3Q7Z443 1732 aa35.13■■■■□ 3.21
SMC4-206ENST00000465903 IL13P35225 146 aa35.13■■■■□ 3.21
SMC4-206ENST00000465903 CAMKK2Q96RR4 588 aa35.12■■■■□ 3.21
SMC4-206ENST00000465903 NHSQ6T4R5 1651 aa35.11■■■■□ 3.21
SMC4-206ENST00000465903 KCNQ2O43526 872 aa35.11■■■■□ 3.21
SMC4-206ENST00000465903 EZH2Q15910 746 aaKnown RBP35.1■■■■□ 3.21
SMC4-206ENST00000465903 DDX10Q13206 875 aaKnown RBP35.09■■■■□ 3.21
SMC4-206ENST00000465903 ACSBG1Q96GR2 724 aa35.09■■■■□ 3.21
SMC4-206ENST00000465903 COL3A1P02461 1466 aaPredicted RBP35.04■■■■□ 3.2
SMC4-206ENST00000465903 DOT1LQ8TEK3 1739 aa35.04■■■■□ 3.2
SMC4-206ENST00000465903 CYP27B1O15528 508 aa35.04■■■■□ 3.2
SMC4-206ENST00000465903 RREB1Q92766 1687 aa35.04■■■■□ 3.2
SMC4-206ENST00000465903 RGPD3A6NKT7 1758 aaPredicted RBP35.03■■■■□ 3.2
SMC4-206ENST00000465903 RGPD4Q7Z3J3 1758 aa35.03■■■■□ 3.2
SMC4-206ENST00000465903 PPP2R1AP30153 589 aa35.03■■■■□ 3.2
SMC4-206ENST00000465903 AEBP1Q8IUX7 1158 aa35.03■■■■□ 3.2
SMC4-206ENST00000465903 BTAF1O14981 1849 aa35.03■■■■□ 3.2
SMC4-206ENST00000465903 PCDH11XQ9BZA7 1347 aa35.03■■■■□ 3.2
SMC4-206ENST00000465903 PCDH11YQ9BZA8 1340 aa35.03■■■■□ 3.2
SMC4-206ENST00000465903 PLSCR1O15162 318 aa35.02■■■■□ 3.2
SMC4-206ENST00000465903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35.02■■■■□ 3.22e-7■■■■□ 21.8
SMC4-206ENST00000465903 PARD3Q8TEW0 1356 aa35■■■■□ 3.19
SMC4-206ENST00000465903 DIAPH1O60610 1272 aaKnown RBP35■■■■□ 3.19
SMC4-206ENST00000465903 SULT6B1Q6IMI4 303 aa35■■■■□ 3.19
SMC4-206ENST00000465903 SPG7Q9UQ90 795 aa35■■■■□ 3.19
SMC4-206ENST00000465903 KDRP35968 1356 aa35■■■■□ 3.19
SMC4-206ENST00000465903 PLEKHG2Q9H7P9 1386 aa34.98■■■■□ 3.19
SMC4-206ENST00000465903 NUP188Q5SRE5 1749 aa34.98■■■■□ 3.19
SMC4-206ENST00000465903 PRIM1P49642 420 aaKnown RBP34.96■■■■□ 3.19
SMC4-206ENST00000465903 PROM2Q8N271 834 aa34.95■■■■□ 3.19
SMC4-206ENST00000465903 NKX1-1Q15270 411 aaPredicted RBP34.94■■■■□ 3.18
SMC4-206ENST00000465903 TOGARAM1Q9Y4F4 1720 aa34.94■■■■□ 3.18
SMC4-206ENST00000465903 ITGB4P16144 1822 aa34.94■■■■□ 3.18
SMC4-206ENST00000465903 HMOX1P09601 288 aa34.9■■■■□ 3.18
SMC4-206ENST00000465903 PHKG2P15735 406 aa34.9■■■■□ 3.18
SMC4-206ENST00000465903 PLEKHO1Q53GL0 409 aaPredicted RBP34.9■■■■□ 3.18
SMC4-206ENST00000465903 IFNL2Q8IZJ0 200 aa34.9■■■■□ 3.18
SMC4-206ENST00000465903 SYTL4Q96C24 671 aaPredicted RBP34.9■■■■□ 3.18
SMC4-206ENST00000465903 CFAP53Q96M91 514 aa34.88■■■■□ 3.17
SMC4-206ENST00000465903 TXNRD1Q16881 649 aa34.87■■■■□ 3.17
SMC4-206ENST00000465903 AMOTQ4VCS5 1084 aa34.87■■■■□ 3.17
SMC4-206ENST00000465903 ZNF316A6NFI3 1004 aaPredicted RBP34.84■■■■□ 3.17
SMC4-206ENST00000465903 U2SURPO15042 1029 aaKnown RBP34.84■■■■□ 3.17
SMC4-206ENST00000465903 LY75O60449 1722 aa34.82■■■■□ 3.16
SMC4-206ENST00000465903 RALBP1Q15311 655 aa34.82■■■■□ 3.16
SMC4-206ENST00000465903 ZNF530Q6P9A1 599 aaPredicted RBP34.82■■■■□ 3.16
SMC4-206ENST00000465903 PSDA5PKW4 1024 aaPredicted RBP34.8■■■■□ 3.16
SMC4-206ENST00000465903 MPRIPQ6WCQ1 1025 aa34.79■■■■□ 3.16
SMC4-206ENST00000465903 VIRMAQ69YN4 1812 aaKnown RBP34.77■■■■□ 3.16
SMC4-206ENST00000465903 R3HDM1Q15032 1099 aaKnown RBP34.77■■■■□ 3.16
SMC4-206ENST00000465903 NBPF14Q5TI25 921 aa34.76■■■■□ 3.16
SMC4-206ENST00000465903 NUDCQ9Y266 331 aa34.76■■■■□ 3.16
SMC4-206ENST00000465903 PIGBQ92521 554 aa34.75■■■■□ 3.15
SMC4-206ENST00000465903 KDM6AO15550 1401 aaPredicted RBP34.74■■■■□ 3.15
SMC4-206ENST00000465903 HSP90AB1P08238 724 aaKnown RBP34.74■■■■□ 3.15
SMC4-206ENST00000465903 DCAF5Q96JK2 942 aa34.74■■■■□ 3.15
SMC4-206ENST00000465903 ANO8Q9HCE9 1232 aaPredicted RBP34.74■■■■□ 3.15
SMC4-206ENST00000465903 LRRC4BQ9NT99 713 aa34.74■■■■□ 3.15
SMC4-206ENST00000465903 SCN11AQ9UI33 1791 aa34.74■■■■□ 3.15
SMC4-206ENST00000465903 MTHFSDQ2M296 383 aaKnown RBP34.73■■■■□ 3.15
SMC4-206ENST00000465903 C1orf141Q5JVX7 400 aa34.72■■■■□ 3.15
SMC4-206ENST00000465903 RSPH6AQ9H0K4 717 aa34.72■■■■□ 3.15
SMC4-206ENST00000465903 PAPPAQ13219 1627 aa34.72■■■■□ 3.15
SMC4-206ENST00000465903 AKAP4Q5JQC9 854 aa34.71■■■■□ 3.15
SMC4-206ENST00000465903 ERVV-2B6SEH9 535 aa34.7■■■■□ 3.15
SMC4-206ENST00000465903 U2AF1L5P0DN76 240 aaPredicted RBP34.7■■■■□ 3.15
SMC4-206ENST00000465903 U2AF1Q01081 240 aaKnown RBP eCLIP34.7■■■■□ 3.15
SMC4-206ENST00000465903 TMOD3Q9NYL9 352 aa34.69■■■■□ 3.14
SMC4-206ENST00000465903 SLC27A3Q5K4L6 730 aa34.68■■■■□ 3.14
SMC4-206ENST00000465903 MYBBP1AQ9BQG0 1328 aaKnown RBP34.68■■■■□ 3.14
SMC4-206ENST00000465903 PRKRIP1Q9H875 184 aaPredicted RBP34.68■■■■□ 3.14
SMC4-206ENST00000465903 KCNQ4P56696 695 aa34.67■■■■□ 3.14
SMC4-206ENST00000465903 PRKAR2BP31323 418 aa34.66■■■■□ 3.14
SMC4-206ENST00000465903 PHACTR3Q96KR7 559 aa34.65■■■■□ 3.14
SMC4-206ENST00000465903 PALLDQ8WX93 1383 aa34.64■■■■□ 3.14
SMC4-206ENST00000465903 FCHSD2O94868 740 aa34.64■■■■□ 3.14
SMC4-206ENST00000465903 ADAMTS7Q9UKP4 1686 aa34.63■■■■□ 3.13
SMC4-206ENST00000465903 TAF1LQ8IZX4 1826 aa34.63■■■■□ 3.13
SMC4-206ENST00000465903 SLC15A2Q16348 729 aa34.63■■■■□ 3.13
SMC4-206ENST00000465903 SMARCC1Q92922 1105 aaPredicted RBP34.63■■■■□ 3.13
SMC4-206ENST00000465903 LGR6Q9HBX8 967 aa34.63■■■■□ 3.13
SMC4-206ENST00000465903 CCNL1Q9UK58 526 aaPredicted RBP34.62■■■■□ 3.13
SMC4-206ENST00000465903 ASAP1Q9ULH1 1129 aa34.62■■■■□ 3.13
SMC4-206ENST00000465903 CABP4P57796 275 aa34.61■■■■□ 3.13
SMC4-206ENST00000465903 ATG3Q9NT62 314 aa34.61■■■■□ 3.13
SMC4-206ENST00000465903 STK32BQ9NY57 414 aa34.61■■■■□ 3.13
SMC4-206ENST00000465903 RNMTO43148 476 aaKnown RBP34.6■■■■□ 3.13
SMC4-206ENST00000465903 ZNF827Q17R98 1081 aa34.59■■■■□ 3.13
SMC4-206ENST00000465903 GAS2L2Q8NHY3 880 aa34.59■■■■□ 3.13
SMC4-206ENST00000465903 NFATC2IPQ8NCF5 419 aa34.58■■■■□ 3.13
SMC4-206ENST00000465903 CASZ1Q86V15 1759 aa34.57■■■■□ 3.12
SMC4-206ENST00000465903 AKT1S1Q96B36 256 aa34.57■■■■□ 3.12
SMC4-206ENST00000465903 C5P01031 1676 aa34.56■■■■□ 3.12
SMC4-206ENST00000465903 TUBGCP6Q96RT7 1819 aa34.55■■■■□ 3.12
SMC4-206ENST00000465903 PDGFDQ9GZP0 370 aaPredicted RBP34.54■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms