RNA–Protein interactions for RNA: ENST00000465337.2

ATPAF2-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 5

Gene ATPAF2, Length 894 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-203ENST00000465337 GLI3P10071 1580 aa17.75■□□□□ 0.43
ATPAF2-203ENST00000465337 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
ATPAF2-203ENST00000465337 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
ATPAF2-203ENST00000465337 GAS2L2Q8NHY3 880 aa17.75■□□□□ 0.43
ATPAF2-203ENST00000465337 PNISRQ8TF01 805 aaKnown RBP17.75■□□□□ 0.43
ATPAF2-203ENST00000465337 PCDH11XQ9BZA7 1347 aa17.74■□□□□ 0.43
ATPAF2-203ENST00000465337 PCDH11YQ9BZA8 1340 aa17.74■□□□□ 0.43
ATPAF2-203ENST00000465337 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
ATPAF2-203ENST00000465337 RGPD5Q99666 1765 aa17.74■□□□□ 0.43
ATPAF2-203ENST00000465337 HMOX1P09601 288 aa17.73■□□□□ 0.43
ATPAF2-203ENST00000465337 FAM196AQ6ZSG2 479 aa17.73■□□□□ 0.43
ATPAF2-203ENST00000465337 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
ATPAF2-203ENST00000465337 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
ATPAF2-203ENST00000465337 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
ATPAF2-203ENST00000465337 BCL9O00512 1426 aa17.72■□□□□ 0.43
ATPAF2-203ENST00000465337 MAPK8IP3Q9UPT6 1336 aa17.72■□□□□ 0.43
ATPAF2-203ENST00000465337 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 PRKAR2BP31323 418 aa17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 NKX1-1Q15270 411 aaPredicted RBP17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 C1orf141Q5JVX7 400 aa17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 RUNDC1Q96C34 613 aa17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
ATPAF2-203ENST00000465337 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
ATPAF2-203ENST00000465337 RGS12O14924 1447 aa17.7■□□□□ 0.42
ATPAF2-203ENST00000465337 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
ATPAF2-203ENST00000465337 THSD7AQ9UPZ6 1657 aa17.69■□□□□ 0.42
ATPAF2-203ENST00000465337 CCDC125Q86Z20 511 aa17.69■□□□□ 0.42
ATPAF2-203ENST00000465337 MIER1Q8N108 512 aa17.69■□□□□ 0.42
ATPAF2-203ENST00000465337 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
ATPAF2-203ENST00000465337 MEGF6O75095 1541 aa17.68■□□□□ 0.42
ATPAF2-203ENST00000465337 HMGB2P26583 209 aaKnown RBP17.68■□□□□ 0.42
ATPAF2-203ENST00000465337 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
ATPAF2-203ENST00000465337 DCAF5Q96JK2 942 aa17.68■□□□□ 0.42
ATPAF2-203ENST00000465337 PHKG2P15735 406 aa17.67■□□□□ 0.42
ATPAF2-203ENST00000465337 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
ATPAF2-203ENST00000465337 ZNF530Q6P9A1 599 aaPredicted RBP17.67■□□□□ 0.42
ATPAF2-203ENST00000465337 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
ATPAF2-203ENST00000465337 PARP4Q9UKK3 1724 aaKnown RBP17.67■□□□□ 0.42
ATPAF2-203ENST00000465337 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
ATPAF2-203ENST00000465337 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
ATPAF2-203ENST00000465337 CYP27B1O15528 508 aa17.65■□□□□ 0.42
ATPAF2-203ENST00000465337 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
ATPAF2-203ENST00000465337 CCDC184Q52MB2 194 aa17.65■□□□□ 0.42
ATPAF2-203ENST00000465337 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
ATPAF2-203ENST00000465337 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
ATPAF2-203ENST00000465337 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
ATPAF2-203ENST00000465337 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
ATPAF2-203ENST00000465337 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
ATPAF2-203ENST00000465337 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
ATPAF2-203ENST00000465337 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-203ENST00000465337 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
ATPAF2-203ENST00000465337 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
ATPAF2-203ENST00000465337 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
ATPAF2-203ENST00000465337 RIPK4P57078 832 aa17.59■□□□□ 0.41
ATPAF2-203ENST00000465337 SF3B2Q13435 895 aaKnown RBP17.59■□□□□ 0.41
ATPAF2-203ENST00000465337 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
ATPAF2-203ENST00000465337 LRRC37A3O60309 1634 aa17.58■□□□□ 0.41
ATPAF2-203ENST00000465337 PKD1L3Q7Z443 1732 aa17.58■□□□□ 0.4
ATPAF2-203ENST00000465337 WNK3Q9BYP7 1800 aa17.57■□□□□ 0.4
ATPAF2-203ENST00000465337 RNMTO43148 476 aaKnown RBP17.57■□□□□ 0.4
ATPAF2-203ENST00000465337 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
ATPAF2-203ENST00000465337 CABP4P57796 275 aa17.56■□□□□ 0.4
ATPAF2-203ENST00000465337 TEFQ10587 303 aa17.56■□□□□ 0.4
ATPAF2-203ENST00000465337 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
ATPAF2-203ENST00000465337 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
ATPAF2-203ENST00000465337 APAF1O14727 1248 aa17.55■□□□□ 0.4
ATPAF2-203ENST00000465337 PRIM1P49642 420 aaKnown RBP17.55■□□□□ 0.4
ATPAF2-203ENST00000465337 MPRIPQ6WCQ1 1025 aa17.55■□□□□ 0.4
ATPAF2-203ENST00000465337 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
ATPAF2-203ENST00000465337 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
ATPAF2-203ENST00000465337 CEMIPQ8WUJ3 1361 aa17.54■□□□□ 0.4
ATPAF2-203ENST00000465337 PLSCR1O15162 318 aa17.54■□□□□ 0.4
ATPAF2-203ENST00000465337 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
ATPAF2-203ENST00000465337 TRIM37O94972 964 aa17.52■□□□□ 0.4
ATPAF2-203ENST00000465337 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
ATPAF2-203ENST00000465337 FAM182BQ5T319 152 aa17.52■□□□□ 0.4
ATPAF2-203ENST00000465337 SYTL4Q96C24 671 aaPredicted RBP17.52■□□□□ 0.4
ATPAF2-203ENST00000465337 BAG6P46379 1132 aa17.51■□□□□ 0.39
ATPAF2-203ENST00000465337 NFATC2IPQ8NCF5 419 aa17.51■□□□□ 0.39
ATPAF2-203ENST00000465337 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
ATPAF2-203ENST00000465337 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
ATPAF2-203ENST00000465337 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
ATPAF2-203ENST00000465337 PIGBQ92521 554 aa17.5■□□□□ 0.39
ATPAF2-203ENST00000465337 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
ATPAF2-203ENST00000465337 APBA3O96018 575 aa17.49■□□□□ 0.39
ATPAF2-203ENST00000465337 UPF1Q92900 1129 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATPAF2-203ENST00000465337 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
ATPAF2-203ENST00000465337 IL16Q14005 1332 aa17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 KDM6AO15550 1401 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 KCNQ2O43526 872 aa17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 MCM10Q7L590 875 aa17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
ATPAF2-203ENST00000465337 WWC1Q8IX03 1113 aa17.47■□□□□ 0.39
ATPAF2-203ENST00000465337 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
ATPAF2-203ENST00000465337 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
ATPAF2-203ENST00000465337 GNAI1P63096 354 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms