RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 RBM19Q9Y4C8 960 aaKnown RBP6.69□□□□□ -1.34
HMGXB4-205ENST00000464480 PATL2C9JE40 543 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 ERVH48-1M5A8F1 160 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 SIAH2O43255 324 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 CLDN10P78369 228 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 PRR20EP86478 221 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 PRR20CP86479 221 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 PRR20DP86480 221 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 PRR20BP86481 221 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 PRR20AP86496 221 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 PSME1Q06323 249 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 NR5A1Q13285 461 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 ANKMY2Q8IV38 441 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 FAM200AQ8TCP9 573 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 STK32AQ8WU08 396 aa6.68□□□□□ -1.34
HMGXB4-205ENST00000464480 TMEM88BA6NKF7 163 aa6.67□□□□□ -1.34
HMGXB4-205ENST00000464480 CC2D2BQ6DHV5 1058 aa6.67□□□□□ -1.34
HMGXB4-205ENST00000464480 AEBP1Q8IUX7 1158 aa6.67□□□□□ -1.34
HMGXB4-205ENST00000464480 CCDC116Q8IYX3 515 aa6.67□□□□□ -1.34
HMGXB4-205ENST00000464480 SIX5Q8N196 739 aa6.67□□□□□ -1.34
HMGXB4-205ENST00000464480 ZNF594Q96JF6 807 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-205ENST00000464480 BRD1O95696 1058 aa6.66□□□□□ -1.34
HMGXB4-205ENST00000464480 GRM5P41594 1212 aa6.66□□□□□ -1.34
HMGXB4-205ENST00000464480 ERVK-9P63128 1117 aa6.66□□□□□ -1.34
HMGXB4-205ENST00000464480 DPYDQ12882 1025 aa6.66□□□□□ -1.34
HMGXB4-205ENST00000464480 TRIM26Q12899 539 aaPredicted RBP6.66□□□□□ -1.34
HMGXB4-205ENST00000464480 KCNA1Q09470 495 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 FOXC1Q12948 553 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 SWI5Q1ZZU3 235 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 CCDC102BQ68D86 513 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 PGPEP1Q9NXJ5 209 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 KIAA1024Q9UPX6 916 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 WASF2Q9Y6W5 498 aa6.65□□□□□ -1.34
HMGXB4-205ENST00000464480 CARNS1A5YM72 827 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 ALDH1A1P00352 501 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 SCTRP47872 440 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 SEC13P55735 322 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 MYT1Q01538 1121 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 PKDCCQ504Y2 493 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 PPP1R26Q5T8A7 1209 aaPredicted RBP6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 CYP4X1Q8N118 509 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 ZNF784Q8NCA9 323 aaPredicted RBP6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 TPCN2Q8NHX9 752 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 SNIP1Q8TAD8 396 aaKnown RBP6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 CYLDQ9NQC7 956 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 TMPRSS4Q9NRS4 437 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 PCDHGA11Q9Y5H2 935 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 EMILIN1Q9Y6C2 1016 aa6.64□□□□□ -1.35
HMGXB4-205ENST00000464480 TNFRSF10AO00220 468 aa6.63□□□□□ -1.35
HMGXB4-205ENST00000464480 ZBTB7BO15156 539 aaPredicted RBP6.63□□□□□ -1.35
HMGXB4-205ENST00000464480 NNTQ13423 1086 aa6.63□□□□□ -1.35
HMGXB4-205ENST00000464480 CYP2U1Q7Z449 544 aa6.63□□□□□ -1.35
HMGXB4-205ENST00000464480 PODXL2Q9NZ53 605 aa6.63□□□□□ -1.35
HMGXB4-205ENST00000464480 PKD2L1Q9P0L9 805 aa6.63□□□□□ -1.35
HMGXB4-205ENST00000464480 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
HMGXB4-205ENST00000464480 GDF9O60383 454 aa6.62□□□□□ -1.35
HMGXB4-205ENST00000464480 DGAT1O75907 488 aa6.62□□□□□ -1.35
HMGXB4-205ENST00000464480 NR3C2P08235 984 aa6.62□□□□□ -1.35
HMGXB4-205ENST00000464480 CLP1Q92989 425 aaKnown RBP6.62□□□□□ -1.35
HMGXB4-205ENST00000464480 DKK1O94907 266 aa6.61□□□□□ -1.35
HMGXB4-205ENST00000464480 TRIM67Q6ZTA4 783 aa6.61□□□□□ -1.35
HMGXB4-205ENST00000464480 OSBPL3Q9H4L5 887 aa6.61□□□□□ -1.35
HMGXB4-205ENST00000464480 FAM187AA6NFU0 413 aa6.6□□□□□ -1.35
HMGXB4-205ENST00000464480 SFI1A8K8P3 1242 aa6.6□□□□□ -1.35
HMGXB4-205ENST00000464480 M0R2N6 131 aa6.6□□□□□ -1.35
HMGXB4-205ENST00000464480 WASLO00401 505 aaPredicted RBP6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 BACH1O14867 736 aa6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 LILRA1O75019 489 aa6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 ATP2B4P23634 1241 aa6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 GDF10P55107 478 aa6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 FAM69CQ0P6D2 419 aa6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 ESCO1Q5FWF5 840 aa6.59□□□□□ -1.35
HMGXB4-205ENST00000464480 GNRH1P01148 92 aa6.58□□□□□ -1.36
HMGXB4-205ENST00000464480 ADH1AP07327 375 aa6.58□□□□□ -1.36
HMGXB4-205ENST00000464480 SCNN1DP51172 638 aa6.58□□□□□ -1.36
HMGXB4-205ENST00000464480 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGXB4-205ENST00000464480 HINFPQ9BQA5 517 aa6.58□□□□□ -1.36
HMGXB4-205ENST00000464480 ZNF358Q9NW07 568 aa6.58□□□□□ -1.36
HMGXB4-205ENST00000464480 TMEM229AB2RXF0 380 aa6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 J3QL48 77 aa6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 PRMT3O60678 531 aa6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 SSFA2P28290 1259 aa6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 WDR4P57081 412 aaKnown RBP6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 CCER1Q8TC90 406 aaPredicted RBP6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 TOR4AQ9NXH8 423 aa6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 IVNS1ABPQ9Y6Y0 642 aa6.57□□□□□ -1.36
HMGXB4-205ENST00000464480 ZIC2O95409 532 aaPredicted RBP6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 INHAP05111 366 aa6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 ADD1P35611 737 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 TSEN2Q8NCE0 465 aaKnown RBP6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 ITPKCQ96DU7 683 aa6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 ETNK1Q9HBU6 452 aa6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 ARHGEF10LQ9HCE6 1279 aa6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
HMGXB4-205ENST00000464480 C1orf216Q8TAB5 229 aa6.55□□□□□ -1.36
HMGXB4-205ENST00000464480 RAB6BQ9NRW1 208 aa6.55□□□□□ -1.36
HMGXB4-205ENST00000464480 CXXC1Q9P0U4 656 aaPredicted RBP6.55□□□□□ -1.36
HMGXB4-205ENST00000464480 SLAIN2Q9P270 581 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms