RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 IGSF1Q8N6C5 1336 aa25.63■■□□□ 1.69
TUBGCP3-204ENST00000464139 BECN1Q14457 450 aa25.62■■□□□ 1.69
TUBGCP3-204ENST00000464139 RTF1Q92541 710 aaKnown RBP25.62■■□□□ 1.69
TUBGCP3-204ENST00000464139 GCC1Q96CN9 775 aa25.62■■□□□ 1.69
TUBGCP3-204ENST00000464139 KDRP35968 1356 aa25.62■■□□□ 1.69
TUBGCP3-204ENST00000464139 KIAA0232Q92628 1395 aa25.62■■□□□ 1.69
TUBGCP3-204ENST00000464139 C14orf37Q86TY3 774 aa25.6■■□□□ 1.69
TUBGCP3-204ENST00000464139 HAP1P54257 671 aaPredicted RBP25.6■■□□□ 1.69
TUBGCP3-204ENST00000464139 ANKLE2Q86XL3 938 aa25.6■■□□□ 1.69
TUBGCP3-204ENST00000464139 HOXC9P31274 260 aa25.59■■□□□ 1.69
TUBGCP3-204ENST00000464139 TSPYL4Q9UJ04 414 aa25.59■■□□□ 1.69
TUBGCP3-204ENST00000464139 LTV1Q96GA3 475 aaPredicted RBP25.58■■□□□ 1.69
TUBGCP3-204ENST00000464139 C22orf23Q9BZE7 217 aa25.58■■□□□ 1.69
TUBGCP3-204ENST00000464139 INTS3Q68E01 1043 aaKnown RBP25.58■■□□□ 1.69
TUBGCP3-204ENST00000464139 RGS12O14924 1447 aa25.58■■□□□ 1.68
TUBGCP3-204ENST00000464139 MARF1Q9Y4F3 1742 aaKnown RBP25.57■■□□□ 1.68
TUBGCP3-204ENST00000464139 GAS2L2Q8NHY3 880 aa25.56■■□□□ 1.68
TUBGCP3-204ENST00000464139 PHF8Q9UPP1 1060 aa25.56■■□□□ 1.68
TUBGCP3-204ENST00000464139 SLC4A2P04920 1241 aa25.56■■□□□ 1.68
TUBGCP3-204ENST00000464139 KIF24Q5T7B8 1368 aa25.55■■□□□ 1.68
TUBGCP3-204ENST00000464139 TBC1D2Q9BYX2 928 aa25.55■■□□□ 1.68
TUBGCP3-204ENST00000464139 SLKQ9H2G2 1235 aaPredicted RBP25.55■■□□□ 1.68
TUBGCP3-204ENST00000464139 CHD2O14647 1828 aaKnown RBP25.53■■□□□ 1.68
TUBGCP3-204ENST00000464139 FRAT2O75474 233 aaPredicted RBP25.53■■□□□ 1.68
TUBGCP3-204ENST00000464139 PTPRCP08575 1304 aa25.52■■□□□ 1.68
TUBGCP3-204ENST00000464139 BCL11AQ9H165 835 aa25.52■■□□□ 1.68
TUBGCP3-204ENST00000464139 BMP2KLQ5H9B9 411 aa25.51■■□□□ 1.67
TUBGCP3-204ENST00000464139 G2E3Q7L622 706 aa25.51■■□□□ 1.67
TUBGCP3-204ENST00000464139 MSH6P52701 1360 aa25.5■■□□□ 1.67
TUBGCP3-204ENST00000464139 USHBP1Q8N6Y0 703 aa25.5■■□□□ 1.67
TUBGCP3-204ENST00000464139 NWD1Q149M9 1564 aa25.49■■□□□ 1.67
TUBGCP3-204ENST00000464139 GNAT3A8MTJ3 354 aa25.49■■□□□ 1.67
TUBGCP3-204ENST00000464139 ESCO1Q5FWF5 840 aa25.48■■□□□ 1.67
TUBGCP3-204ENST00000464139 MEIS3Q99687 375 aa25.48■■□□□ 1.67
TUBGCP3-204ENST00000464139 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
TUBGCP3-204ENST00000464139 DCTPP1Q9H773 170 aa25.47■■□□□ 1.67
TUBGCP3-204ENST00000464139 F6X3S4 739 aa25.47■■□□□ 1.67
TUBGCP3-204ENST00000464139 ANKRD44Q8N8A2 993 aa25.47■■□□□ 1.67
TUBGCP3-204ENST00000464139 USP54Q70EL1 1684 aa25.46■■□□□ 1.67
TUBGCP3-204ENST00000464139 HTATSF1O43719 755 aaKnown RBP25.46■■□□□ 1.67
TUBGCP3-204ENST00000464139 ATP10DQ9P241 1426 aa25.46■■□□□ 1.67
TUBGCP3-204ENST00000464139 SLC4A10Q6U841 1118 aa25.46■■□□□ 1.67
TUBGCP3-204ENST00000464139 SPRYD3Q8NCJ5 442 aa25.46■■□□□ 1.67
TUBGCP3-204ENST00000464139 PSME1Q06323 249 aa25.45■■□□□ 1.67
TUBGCP3-204ENST00000464139 CEP85Q6P2H3 762 aa25.45■■□□□ 1.67
TUBGCP3-204ENST00000464139 IL17REQ8NFR9 667 aa25.45■■□□□ 1.67
TUBGCP3-204ENST00000464139 RTL1A6NKG5 1358 aa25.45■■□□□ 1.66
TUBGCP3-204ENST00000464139 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
TUBGCP3-204ENST00000464139 ANTXR1Q9H6X2 564 aa25.44■■□□□ 1.66
TUBGCP3-204ENST00000464139 SETD1BQ9UPS6 1966 aaKnown RBP25.44■■□□□ 1.66
TUBGCP3-204ENST00000464139 RPAP2Q8IXW5 612 aaPredicted RBP25.44■■□□□ 1.66
TUBGCP3-204ENST00000464139 NECTIN2Q92692 538 aa25.44■■□□□ 1.66
TUBGCP3-204ENST00000464139 ZNF142P52746 1687 aaPredicted RBP25.43■■□□□ 1.66
TUBGCP3-204ENST00000464139 MAP3K5Q99683 1374 aa25.43■■□□□ 1.66
TUBGCP3-204ENST00000464139 LTN1O94822 1766 aa25.43■■□□□ 1.66
TUBGCP3-204ENST00000464139 C16orf71Q8IYS4 520 aaPredicted RBP25.42■■□□□ 1.66
TUBGCP3-204ENST00000464139 PLEKHG5O94827 1062 aa25.42■■□□□ 1.66
TUBGCP3-204ENST00000464139 PLEKHM2Q8IWE5 1019 aa25.41■■□□□ 1.66
TUBGCP3-204ENST00000464139 STK31Q9BXU1 1019 aa25.41■■□□□ 1.66
TUBGCP3-204ENST00000464139 ADGRL3Q9HAR2 1447 aa25.41■■□□□ 1.66
TUBGCP3-204ENST00000464139 LRRC37A3O60309 1634 aa25.41■■□□□ 1.66
TUBGCP3-204ENST00000464139 TBC1D9Q6ZT07 1266 aa25.41■■□□□ 1.66
TUBGCP3-204ENST00000464139 IP6K1Q92551 441 aa25.41■■□□□ 1.66
TUBGCP3-204ENST00000464139 APBB1O00213 710 aa25.4■■□□□ 1.66
TUBGCP3-204ENST00000464139 RBM25P49756 843 aaKnown RBP25.4■■□□□ 1.66
TUBGCP3-204ENST00000464139 NBPF6Q5VWK0 638 aa25.39■■□□□ 1.66
TUBGCP3-204ENST00000464139 NBPF4Q96M43 638 aa25.39■■□□□ 1.66
TUBGCP3-204ENST00000464139 GSPT1P15170 499 aaKnown RBP25.39■■□□□ 1.65
TUBGCP3-204ENST00000464139 XPCQ01831 940 aaPredicted RBP25.39■■□□□ 1.65
TUBGCP3-204ENST00000464139 TAF7Q15545 349 aaPredicted RBP25.38■■□□□ 1.65
TUBGCP3-204ENST00000464139 ORAI2Q96SN7 254 aa25.38■■□□□ 1.65
TUBGCP3-204ENST00000464139 ADAMTSL3P82987 1691 aa25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 SMARCA5O60264 1052 aaPredicted RBP25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 GSE1Q14687 1217 aa25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 OTUD7AQ8TE49 926 aaPredicted RBP25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 NFAT5O94916 1531 aa25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 CCT4P50991 539 aaKnown RBP25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 CCDC30Q5VVM6 783 aa25.37■■□□□ 1.65
TUBGCP3-204ENST00000464139 FLIIQ13045 1269 aa25.36■■□□□ 1.65
TUBGCP3-204ENST00000464139 NPHP4O75161 1426 aaPredicted RBP25.36■■□□□ 1.65
TUBGCP3-204ENST00000464139 FKBP5Q13451 457 aaPredicted RBP25.35■■□□□ 1.65
TUBGCP3-204ENST00000464139 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
TUBGCP3-204ENST00000464139 CDC45O75419 566 aa25.33■■□□□ 1.65
TUBGCP3-204ENST00000464139 TTC22Q5TAA0 569 aa25.33■■□□□ 1.65
TUBGCP3-204ENST00000464139 HSCBQ8IWL3 235 aa25.33■■□□□ 1.65
TUBGCP3-204ENST00000464139 KCNH5Q8NCM2 988 aa25.33■■□□□ 1.65
TUBGCP3-204ENST00000464139 LMOD2Q6P5Q4 547 aa25.32■■□□□ 1.64
TUBGCP3-204ENST00000464139 FAM208AQ9UK61 1670 aaKnown RBP25.32■■□□□ 1.64
TUBGCP3-204ENST00000464139 LGR6Q9HBX8 967 aa25.31■■□□□ 1.64
TUBGCP3-204ENST00000464139 KIF2CQ99661 725 aa25.3■■□□□ 1.64
TUBGCP3-204ENST00000464139 BABAM1Q9NWV8 329 aa25.3■■□□□ 1.64
TUBGCP3-204ENST00000464139 RGPD2P0DJD1 1756 aa25.3■■□□□ 1.64
TUBGCP3-204ENST00000464139 HMMRO75330 724 aa25.29■■□□□ 1.64
TUBGCP3-204ENST00000464139 GNAI2P04899 355 aa25.29■■□□□ 1.64
TUBGCP3-204ENST00000464139 GCP02774 474 aa25.28■■□□□ 1.64
TUBGCP3-204ENST00000464139 HDGFL1Q5TGJ6 251 aa25.28■■□□□ 1.64
TUBGCP3-204ENST00000464139 CEMIPQ8WUJ3 1361 aa25.27■■□□□ 1.64
TUBGCP3-204ENST00000464139 SNX21Q969T3 373 aa25.26■■□□□ 1.63
TUBGCP3-204ENST00000464139 PHAXQ9H814 394 aaKnown RBP25.26■■□□□ 1.63
TUBGCP3-204ENST00000464139 SOS1Q07889 1333 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms