RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 RGS3P49796 1198 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 RIPK4P57078 832 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 NEUROD2Q15784 382 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 ATF7IPQ6VMQ6 1270 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 SMC4Q9NTJ3 1288 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 COG6Q9Y2V7 657 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 CCDC61Q9Y6R9 512 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 COL3A1P02461 1466 aaPredicted RBP5.94□□□□□ -1.46
VPS72-203ENST00000463470 MINK1Q8N4C8 1332 aaPredicted RBP5.94□□□□□ -1.46
VPS72-203ENST00000463470 KNDC1Q76NI1 1749 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 KIF24Q5T7B8 1368 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 ADAMTS2O95450 1211 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 ESCO1Q5FWF5 840 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 NGLY1Q96IV0 654 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 COG3Q96JB2 828 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 CHMP4AQ9BY43 222 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 GGNBP2Q9H3C7 697 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 IFT57Q9NWB7 429 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 CABP1Q9NZU7 370 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 USP21Q9UK80 565 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 TRPC5Q9UL62 973 aaPredicted RBP5.93□□□□□ -1.46
VPS72-203ENST00000463470 SBNO1A3KN83 1393 aa5.93□□□□□ -1.46
VPS72-203ENST00000463470 CPSF1Q10570 1443 aaKnown RBP5.92□□□□□ -1.46
VPS72-203ENST00000463470 ANKARQ7Z5J8 1434 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 CD163L1Q9NR16 1453 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 CAPN15O75808 1086 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 NFE2L2Q16236 605 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 IL27Q8NEV9 243 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 GCC1Q96CN9 775 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 API5Q9BZZ5 524 aaKnown RBP5.92□□□□□ -1.46
VPS72-203ENST00000463470 TRIM35Q9UPQ4 493 aa5.92□□□□□ -1.46
VPS72-203ENST00000463470 RRP7AQ9Y3A4 280 aaKnown RBP5.92□□□□□ -1.46
VPS72-203ENST00000463470 FMN2Q9NZ56 1722 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 KIF20BQ96Q89 1820 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 IGHDP01880 384 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 XPCQ01831 940 aaPredicted RBP5.91□□□□□ -1.46
VPS72-203ENST00000463470 EXOSC9Q06265 439 aaKnown RBP5.91□□□□□ -1.46
VPS72-203ENST00000463470 SAFB2Q14151 953 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS72-203ENST00000463470 SMC5Q8IY18 1101 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 GJD4Q96KN9 370 aaPredicted RBP5.91□□□□□ -1.46
VPS72-203ENST00000463470 RSPH6AQ9H0K4 717 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 POLKQ9UBT6 870 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 PRR36Q9H6K5 1346 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 TNS3Q68CZ2 1445 aa5.91□□□□□ -1.46
VPS72-203ENST00000463470 GLI3P10071 1580 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 TRIM27P14373 513 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 PTMSP20962 102 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 PRKAR2BP31323 418 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 UNC5CLQ8IV45 518 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 SSH1Q8WYL5 1049 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 NUDT16Q96DE0 195 aaKnown RBP5.9□□□□□ -1.46
VPS72-203ENST00000463470 ZBTB40Q9NUA8 1239 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 PHF8Q9UPP1 1060 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 PDZRN3Q9UPQ7 1066 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 PCDHB15Q9Y5E8 787 aa5.9□□□□□ -1.46
VPS72-203ENST00000463470 SOS1Q07889 1333 aaPredicted RBP5.9□□□□□ -1.47
VPS72-203ENST00000463470 TTC21BQ7Z4L5 1316 aa5.9□□□□□ -1.47
VPS72-203ENST00000463470 VIRMAQ69YN4 1812 aaKnown RBP5.9□□□□□ -1.47
VPS72-203ENST00000463470 KIF1AQ12756 1690 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 PLEKHG3A1L390 1219 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 IL13P35225 146 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 GSE1Q14687 1217 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 VPS72Q15906 364 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 CCDC125Q86Z20 511 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 ITPRIPQ8IWB1 547 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 NOB1Q9ULX3 412 aaKnown RBP5.89□□□□□ -1.47
VPS72-203ENST00000463470 TTC21AQ8NDW8 1320 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 ARHGEF10O15013 1369 aa5.89□□□□□ -1.47
VPS72-203ENST00000463470 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.88□□□□□ -1.47
VPS72-203ENST00000463470 NUTM2FA1L443 756 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 HTATSF1O43719 755 aaKnown RBP5.88□□□□□ -1.47
VPS72-203ENST00000463470 ZNF853P0CG23 659 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 RLBP1P12271 317 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 NUCB1Q02818 461 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 NFKBIBQ15653 356 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 BMP2KLQ5H9B9 411 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 ARXQ96QS3 562 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 BCL11AQ9H165 835 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 BABAM1Q9NWV8 329 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 PTPRCP08575 1304 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 KIAA0232Q92628 1395 aa5.88□□□□□ -1.47
VPS72-203ENST00000463470 VAMP4O75379 141 aa5.87□□□□□ -1.47
VPS72-203ENST00000463470 PSME1Q06323 249 aa5.87□□□□□ -1.47
VPS72-203ENST00000463470 L1TD1Q5T7N2 865 aaKnown RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS72-203ENST00000463470 RPAP2Q8IXW5 612 aaPredicted RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 CABLES1Q8TDN4 633 aa5.87□□□□□ -1.47
VPS72-203ENST00000463470 TSR2Q969E8 191 aaKnown RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 C22orf23Q9BZE7 217 aa5.87□□□□□ -1.47
VPS72-203ENST00000463470 ISY1Q9ULR0 285 aaKnown RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 ZBTB12Q9Y330 459 aaPredicted RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 LAS1LQ9Y4W2 734 aaKnown RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 TRPM3Q9HCF6 1732 aaPredicted RBP5.87□□□□□ -1.47
VPS72-203ENST00000463470 MON2Q7Z3U7 1717 aa5.86□□□□□ -1.47
VPS72-203ENST00000463470 USP31Q70CQ4 1352 aa5.86□□□□□ -1.47
VPS72-203ENST00000463470 ABCC4O15439 1325 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms