RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 HSP90AA2PQ14568 343 aaPredicted RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 HS1BP3Q53T59 392 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 MCTP1Q6DN14 999 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 GAS2L3Q86XJ1 694 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 PLEKHM2Q8IWE5 1019 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 SIRT2Q8IXJ6 389 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 TSPYL6Q8N831 410 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 PHACTR3Q96KR7 559 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 PPP1R9BQ96SB3 815 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 THUMPD2Q9BTF0 503 aaKnown RBP4.32□□□□□ -1.72
COL8A1-204ENST00000462604 DCTPP1Q9H773 170 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 EMILIN1Q9Y6C2 1016 aa4.32□□□□□ -1.72
COL8A1-204ENST00000462604 KIAA0232Q92628 1395 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 ERBB4Q15303 1308 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 WASLO00401 505 aaPredicted RBP4.31□□□□□ -1.72
COL8A1-204ENST00000462604 ELL2O00472 640 aaPredicted RBP4.31□□□□□ -1.72
COL8A1-204ENST00000462604 ERC2O15083 957 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 MBD3O95983 291 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 CYP2E1P05181 493 aaPredicted RBP4.31□□□□□ -1.72
COL8A1-204ENST00000462604 MCM2P49736 904 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 ZSCAN23Q3MJ62 389 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 CAVIN1Q6NZI2 390 aaKnown RBP4.31□□□□□ -1.72
COL8A1-204ENST00000462604 CEP85Q6P2H3 762 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 NME9Q86XW9 330 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 C8orf58Q8NAV2 365 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.31□□□□□ -1.72
COL8A1-204ENST00000462604 RBM42Q9BTD8 480 aaKnown RBP4.31□□□□□ -1.72
COL8A1-204ENST00000462604 USP26Q9BXU7 913 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 ALKQ9UM73 1620 aa4.31□□□□□ -1.72
COL8A1-204ENST00000462604 RTL1A6NKG5 1358 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 MSH6P52701 1360 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 OFD1O75665 1012 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 PHF14O94880 888 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 SDSP20132 328 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 MCM5P33992 734 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 CCT4P50991 539 aaKnown RBP4.3□□□□□ -1.72
COL8A1-204ENST00000462604 TERF1P54274 439 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 CSPP1Q1MSJ5 1256 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 SYAP1Q96A49 352 aaPredicted RBP4.3□□□□□ -1.72
COL8A1-204ENST00000462604 CCDC39Q9UFE4 941 aa4.3□□□□□ -1.72
COL8A1-204ENST00000462604 ATP10DQ9P241 1426 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 ANKRD26Q9UPS8 1709 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 TMEM131LA2VDJ0 1609 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 FAM83GA6ND36 823 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 APBB1O00213 710 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 CHL1O00533 1208 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 RGL2O15211 777 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 PRPF40AO75400 957 aaKnown RBP4.29□□□□□ -1.72
COL8A1-204ENST00000462604 GNAI2P04899 355 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 FBXO31Q5XUX0 539 aaPredicted RBP4.29□□□□□ -1.72
COL8A1-204ENST00000462604 LRSAM1Q6UWE0 723 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 KIAA1211Q6ZU35 1233 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 WAPLQ7Z5K2 1190 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 OSCARQ8IYS5 282 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 NUDT16Q96DE0 195 aaKnown RBP4.29□□□□□ -1.72
COL8A1-204ENST00000462604 SIRT1Q96EB6 747 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 MAP7D2Q96T17 732 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 LMBRD1Q9NUN5 540 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 A2ML1A8K2U0 1454 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 RGS12O14924 1447 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 SSH2Q76I76 1423 aa4.29□□□□□ -1.72
COL8A1-204ENST00000462604 ARHGEF10O15013 1369 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 AOX1Q06278 1338 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 TTC21BQ7Z4L5 1316 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 SMARCA5O60264 1052 aaPredicted RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 PTMAP06454 111 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 GNAI3P08754 354 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 FBLN1P23142 703 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 HDGFP51858 240 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 ANAPC15P60006 121 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 DCTN1Q14203 1278 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 EIF4A2Q14240 407 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 SULT6B1Q6IMI4 303 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 C16orf71Q8IYS4 520 aaPredicted RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 ZGPATQ8N5A5 531 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 OTUD7AQ8TE49 926 aaPredicted RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 RTF1Q92541 710 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 MEIS3Q99687 375 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 STK31Q9BXU1 1019 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 PDCL3Q9H2J4 239 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 TSPY26PQ9H489 355 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 OSBPL3Q9H4L5 887 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 TSPYL4Q9UJ04 414 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 NOL7Q9UMY1 257 aaKnown RBP4.28□□□□□ -1.72
COL8A1-204ENST00000462604 CCDC61Q9Y6R9 512 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 SIGLEC1Q9BZZ2 1709 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 TECPR2O15040 1411 aa4.28□□□□□ -1.72
COL8A1-204ENST00000462604 SOS1Q07889 1333 aaPredicted RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 WDR33Q9C0J8 1336 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 PREX1Q8TCU6 1659 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 SYCE3A1L190 88 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 EPB41L2O43491 1005 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ZNF500O60304 480 aaPredicted RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 ECM2O94769 699 aaPredicted RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 BRD1O95696 1058 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 MX1P20591 662 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 PRIM1P49642 420 aaKnown RBP4.27□□□□□ -1.73
COL8A1-204ENST00000462604 NEK4P51957 841 aa4.27□□□□□ -1.73
COL8A1-204ENST00000462604 PDE1AP54750 535 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms