RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 IGSF1Q8N6C5 1336 aa21.51■■□□□ 1.03
ERCC3-206ENST00000462306 APBA3O96018 575 aa21.5■■□□□ 1.03
ERCC3-206ENST00000462306 EN1Q05925 392 aaPredicted RBP21.5■■□□□ 1.03
ERCC3-206ENST00000462306 BCL11BQ9C0K0 894 aaPredicted RBP21.49■■□□□ 1.03
ERCC3-206ENST00000462306 IL13P35225 146 aa21.48■■□□□ 1.03
ERCC3-206ENST00000462306 CAMKK2Q96RR4 588 aa21.48■■□□□ 1.03
ERCC3-206ENST00000462306 KCNQ2O43526 872 aa21.46■■□□□ 1.03
ERCC3-206ENST00000462306 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
ERCC3-206ENST00000462306 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
ERCC3-206ENST00000462306 ACSBG1Q96GR2 724 aa21.45■■□□□ 1.02
ERCC3-206ENST00000462306 PKD1L3Q7Z443 1732 aa21.45■■□□□ 1.02
ERCC3-206ENST00000462306 NHSQ6T4R5 1651 aa21.44■■□□□ 1.02
ERCC3-206ENST00000462306 PCDH11XQ9BZA7 1347 aa21.44■■□□□ 1.02
ERCC3-206ENST00000462306 PCDH11YQ9BZA8 1340 aa21.44■■□□□ 1.02
ERCC3-206ENST00000462306 COL3A1P02461 1466 aaPredicted RBP21.44■■□□□ 1.02
ERCC3-206ENST00000462306 CYP27B1O15528 508 aa21.43■■□□□ 1.02
ERCC3-206ENST00000462306 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
ERCC3-206ENST00000462306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.43■■□□□ 1.025e-6■■□□□ 12.3
ERCC3-206ENST00000462306 PARD3Q8TEW0 1356 aa21.43■■□□□ 1.02
ERCC3-206ENST00000462306 PLSCR1O15162 318 aa21.42■■□□□ 1.02
ERCC3-206ENST00000462306 PPP2R1AP30153 589 aa21.42■■□□□ 1.02
ERCC3-206ENST00000462306 KDRP35968 1356 aa21.42■■□□□ 1.02
ERCC3-206ENST00000462306 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
ERCC3-206ENST00000462306 DIAPH1O60610 1272 aaKnown RBP21.41■■□□□ 1.02
ERCC3-206ENST00000462306 SPG7Q9UQ90 795 aa21.41■■□□□ 1.02
ERCC3-206ENST00000462306 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
ERCC3-206ENST00000462306 RGPD3A6NKT7 1758 aaPredicted RBP21.38■■□□□ 1.01
ERCC3-206ENST00000462306 RGPD4Q7Z3J3 1758 aa21.38■■□□□ 1.01
ERCC3-206ENST00000462306 RREB1Q92766 1687 aa21.38■■□□□ 1.01
ERCC3-206ENST00000462306 PRIM1P49642 420 aaKnown RBP21.38■■□□□ 1.01
ERCC3-206ENST00000462306 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
ERCC3-206ENST00000462306 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
ERCC3-206ENST00000462306 PROM2Q8N271 834 aa21.36■■□□□ 1.01
ERCC3-206ENST00000462306 BTAF1O14981 1849 aa21.36■■□□□ 1.01
ERCC3-206ENST00000462306 PHKG2P15735 406 aa21.35■■□□□ 1.01
ERCC3-206ENST00000462306 PLEKHO1Q53GL0 409 aaPredicted RBP21.35■■□□□ 1.01
ERCC3-206ENST00000462306 KAT6BQ8WYB5 2073 aa21.35■■□□□ 1.01
ERCC3-206ENST00000462306 HMOX1P09601 288 aa21.34■■□□□ 1.01
ERCC3-206ENST00000462306 IFNL2Q8IZJ0 200 aa21.34■■□□□ 1.01
ERCC3-206ENST00000462306 SYTL4Q96C24 671 aaPredicted RBP21.34■■□□□ 1.01
ERCC3-206ENST00000462306 CFAP53Q96M91 514 aa21.34■■□□□ 1.01
ERCC3-206ENST00000462306 NUP188Q5SRE5 1749 aa21.34■■□□□ 1.01
ERCC3-206ENST00000462306 AMOTQ4VCS5 1084 aa21.33■■□□□ 1.01
ERCC3-206ENST00000462306 TOGARAM1Q9Y4F4 1720 aa21.32■■□□□ 1
ERCC3-206ENST00000462306 TXNRD1Q16881 649 aa21.32■■□□□ 1
ERCC3-206ENST00000462306 ZNF316A6NFI3 1004 aaPredicted RBP21.31■■□□□ 1
ERCC3-206ENST00000462306 U2SURPO15042 1029 aaKnown RBP21.31■■□□□ 1
ERCC3-206ENST00000462306 RALBP1Q15311 655 aa21.31■■□□□ 1
ERCC3-206ENST00000462306 ZNF530Q6P9A1 599 aaPredicted RBP21.3■■□□□ 1
ERCC3-206ENST00000462306 PSDA5PKW4 1024 aaPredicted RBP21.27■■□□□ 1
ERCC3-206ENST00000462306 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
ERCC3-206ENST00000462306 NUDCQ9Y266 331 aa21.27■■□□□ 1
ERCC3-206ENST00000462306 ITGB4P16144 1822 aa21.27■□□□□ 0.99
ERCC3-206ENST00000462306 HSP90AB1P08238 724 aaKnown RBP21.26■□□□□ 0.99
ERCC3-206ENST00000462306 R3HDM1Q15032 1099 aaKnown RBP21.26■□□□□ 0.99
ERCC3-206ENST00000462306 NBPF14Q5TI25 921 aa21.26■□□□□ 0.99
ERCC3-206ENST00000462306 PIGBQ92521 554 aa21.26■□□□□ 0.99
ERCC3-206ENST00000462306 DCAF5Q96JK2 942 aa21.26■□□□□ 0.99
ERCC3-206ENST00000462306 KDM6AO15550 1401 aaPredicted RBP21.25■□□□□ 0.99
ERCC3-206ENST00000462306 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
ERCC3-206ENST00000462306 ANO8Q9HCE9 1232 aaPredicted RBP21.25■□□□□ 0.99
ERCC3-206ENST00000462306 MTHFSDQ2M296 383 aaKnown RBP21.24■□□□□ 0.99
ERCC3-206ENST00000462306 RSPH6AQ9H0K4 717 aa21.24■□□□□ 0.99
ERCC3-206ENST00000462306 LRRC4BQ9NT99 713 aa21.24■□□□□ 0.99
ERCC3-206ENST00000462306 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
ERCC3-206ENST00000462306 LY75O60449 1722 aa21.23■□□□□ 0.99
ERCC3-206ENST00000462306 U2AF1L5P0DN76 240 aaPredicted RBP21.22■□□□□ 0.99
ERCC3-206ENST00000462306 U2AF1Q01081 240 aaKnown RBP eCLIP21.22■□□□□ 0.99
ERCC3-206ENST00000462306 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
ERCC3-206ENST00000462306 SLC27A3Q5K4L6 730 aa21.22■□□□□ 0.99
ERCC3-206ENST00000462306 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
ERCC3-206ENST00000462306 TMOD3Q9NYL9 352 aa21.22■□□□□ 0.99
ERCC3-206ENST00000462306 MYBBP1AQ9BQG0 1328 aaKnown RBP21.22■□□□□ 0.99
ERCC3-206ENST00000462306 PAPPAQ13219 1627 aa21.21■□□□□ 0.99
ERCC3-206ENST00000462306 FCHSD2O94868 740 aa21.2■□□□□ 0.98
ERCC3-206ENST00000462306 PRKAR2BP31323 418 aa21.2■□□□□ 0.98
ERCC3-206ENST00000462306 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
ERCC3-206ENST00000462306 PALLDQ8WX93 1383 aa21.2■□□□□ 0.98
ERCC3-206ENST00000462306 KCNQ4P56696 695 aa21.19■□□□□ 0.98
ERCC3-206ENST00000462306 SMARCC1Q92922 1105 aaPredicted RBP21.19■□□□□ 0.98
ERCC3-206ENST00000462306 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
ERCC3-206ENST00000462306 ASAP1Q9ULH1 1129 aa21.18■□□□□ 0.98
ERCC3-206ENST00000462306 CABP4P57796 275 aa21.17■□□□□ 0.98
ERCC3-206ENST00000462306 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
ERCC3-206ENST00000462306 LGR6Q9HBX8 967 aa21.17■□□□□ 0.98
ERCC3-206ENST00000462306 STK32BQ9NY57 414 aa21.17■□□□□ 0.98
ERCC3-206ENST00000462306 SCN11AQ9UI33 1791 aa21.17■□□□□ 0.98
ERCC3-206ENST00000462306 RNMTO43148 476 aaKnown RBP21.16■□□□□ 0.98
ERCC3-206ENST00000462306 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
ERCC3-206ENST00000462306 ATG3Q9NT62 314 aa21.16■□□□□ 0.98
ERCC3-206ENST00000462306 ADAMTS7Q9UKP4 1686 aa21.15■□□□□ 0.98
ERCC3-206ENST00000462306 ZNF827Q17R98 1081 aa21.15■□□□□ 0.98
ERCC3-206ENST00000462306 NFATC2IPQ8NCF5 419 aa21.14■□□□□ 0.97
ERCC3-206ENST00000462306 AKT1S1Q96B36 256 aa21.14■□□□□ 0.97
ERCC3-206ENST00000462306 MAP3K5Q99683 1374 aa21.13■□□□□ 0.97
ERCC3-206ENST00000462306 MRC1P22897 1456 aa21.13■□□□□ 0.97
ERCC3-206ENST00000462306 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
ERCC3-206ENST00000462306 PDGFDQ9GZP0 370 aaPredicted RBP21.12■□□□□ 0.97
ERCC3-206ENST00000462306 SLC52A2Q9HAB3 445 aa21.12■□□□□ 0.97
ERCC3-206ENST00000462306 LOC102724428A0A0B4J2F2 783 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms