RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CEP85Q6P2H3 762 aa22.72■■□□□ 1.23
HPS3-204ENST00000462030 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
HPS3-204ENST00000462030 MSH6P52701 1360 aa22.71■■□□□ 1.23
HPS3-204ENST00000462030 GLIPR1L2Q4G1C9 344 aa22.71■■□□□ 1.23
HPS3-204ENST00000462030 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
HPS3-204ENST00000462030 DLC1Q96QB1 1528 aa22.7■■□□□ 1.22
HPS3-204ENST00000462030 KIAA1211Q6ZU35 1233 aa22.7■■□□□ 1.22
HPS3-204ENST00000462030 RBSNQ9H1K0 784 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 AATKQ6ZMQ8 1374 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 TPM2P07951 284 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 CPS1P31327 1500 aa22.69■■□□□ 1.22
HPS3-204ENST00000462030 RPAP2Q8IXW5 612 aaPredicted RBP22.68■■□□□ 1.22
HPS3-204ENST00000462030 CHAMP1Q96JM3 812 aa22.68■■□□□ 1.22
HPS3-204ENST00000462030 RBM27Q9P2N5 1060 aaKnown RBP22.68■■□□□ 1.22
HPS3-204ENST00000462030 ZDHHC9Q9Y397 364 aa22.68■■□□□ 1.22
HPS3-204ENST00000462030 RTL1A6NKG5 1358 aa22.68■■□□□ 1.22
HPS3-204ENST00000462030 NCKAP5LQ9HCH0 1330 aa22.67■■□□□ 1.22
HPS3-204ENST00000462030 ST18O60284 1047 aa22.67■■□□□ 1.22
HPS3-204ENST00000462030 PRPF40AO75400 957 aaKnown RBP22.67■■□□□ 1.22
HPS3-204ENST00000462030 GPT2Q8TD30 523 aa22.67■■□□□ 1.22
HPS3-204ENST00000462030 MEIS3Q99687 375 aa22.67■■□□□ 1.22
HPS3-204ENST00000462030 CWC22Q9HCG8 908 aaKnown RBP22.67■■□□□ 1.22
HPS3-204ENST00000462030 SETD1AO15047 1707 aaKnown RBP22.67■■□□□ 1.22
HPS3-204ENST00000462030 MSNP26038 577 aaKnown RBP22.67■■□□□ 1.22
HPS3-204ENST00000462030 AEBP1Q8IUX7 1158 aa22.67■■□□□ 1.22
HPS3-204ENST00000462030 PRIM1P49642 420 aaKnown RBP22.66■■□□□ 1.22
HPS3-204ENST00000462030 CASC1Q6TDU7 716 aa22.66■■□□□ 1.22
HPS3-204ENST00000462030 COG3Q96JB2 828 aa22.66■■□□□ 1.22
HPS3-204ENST00000462030 WASLO00401 505 aaPredicted RBP22.64■■□□□ 1.21
HPS3-204ENST00000462030 OFD1O75665 1012 aa22.64■■□□□ 1.21
HPS3-204ENST00000462030 VSIG10Q8N0Z9 540 aa22.64■■□□□ 1.21
HPS3-204ENST00000462030 REC8O95072 547 aa22.63■■□□□ 1.21
HPS3-204ENST00000462030 MCM10Q7L590 875 aa22.63■■□□□ 1.21
HPS3-204ENST00000462030 MON2Q7Z3U7 1717 aa22.62■■□□□ 1.21
HPS3-204ENST00000462030 PDLIM2Q96JY6 352 aa22.62■■□□□ 1.21
HPS3-204ENST00000462030 NSFL1CQ9UNZ2 370 aaKnown RBP22.62■■□□□ 1.21
HPS3-204ENST00000462030 CHL1O00533 1208 aa22.61■■□□□ 1.21
HPS3-204ENST00000462030 ERC2O15083 957 aa22.61■■□□□ 1.21
HPS3-204ENST00000462030 FOXD4L5Q5VV16 416 aaPredicted RBP22.61■■□□□ 1.21
HPS3-204ENST00000462030 SULT6B1Q6IMI4 303 aa22.61■■□□□ 1.21
HPS3-204ENST00000462030 FOXD4L4Q8WXT5 416 aaPredicted RBP22.61■■□□□ 1.21
HPS3-204ENST00000462030 TMEM63CQ9P1W3 806 aa22.6■■□□□ 1.21
HPS3-204ENST00000462030 NUDT16Q96DE0 195 aaKnown RBP22.6■■□□□ 1.21
HPS3-204ENST00000462030 NRKQ7Z2Y5 1582 aa22.59■■□□□ 1.21
HPS3-204ENST00000462030 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.59■■□□□ 1.21
HPS3-204ENST00000462030 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
HPS3-204ENST00000462030 PTPRCP08575 1304 aa22.59■■□□□ 1.21
HPS3-204ENST00000462030 EIF4A2Q14240 407 aaKnown RBP22.59■■□□□ 1.21
HPS3-204ENST00000462030 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.59■■□□□ 1.21
HPS3-204ENST00000462030 C3P01024 1663 aa22.59■■□□□ 1.21
HPS3-204ENST00000462030 HS1BP3Q53T59 392 aa22.58■■□□□ 1.21
HPS3-204ENST00000462030 NOL7Q9UMY1 257 aaKnown RBP22.58■■□□□ 1.21
HPS3-204ENST00000462030 SYCE3A1L190 88 aa22.57■■□□□ 1.2
HPS3-204ENST00000462030 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
HPS3-204ENST00000462030 PDE1AP54750 535 aa22.57■■□□□ 1.2
HPS3-204ENST00000462030 HAP1P54257 671 aaPredicted RBP22.56■■□□□ 1.2
HPS3-204ENST00000462030 TSHZ3Q63HK5 1081 aa22.56■■□□□ 1.2
HPS3-204ENST00000462030 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
HPS3-204ENST00000462030 AKAP12Q02952 1782 aa22.56■■□□□ 1.2
HPS3-204ENST00000462030 SLC4A2P04920 1241 aa22.56■■□□□ 1.2
HPS3-204ENST00000462030 NEK4P51957 841 aa22.56■■□□□ 1.2
HPS3-204ENST00000462030 LRSAM1Q6UWE0 723 aa22.56■■□□□ 1.2
HPS3-204ENST00000462030 TMX3Q96JJ7 454 aa22.55■■□□□ 1.2
HPS3-204ENST00000462030 ITSN1Q15811 1721 aa22.55■■□□□ 1.2
HPS3-204ENST00000462030 F6X3S4 739 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
HPS3-204ENST00000462030 OSBPL3Q9H4L5 887 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 MIS18AQ9NYP9 233 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 CCDC61Q9Y6R9 512 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 METP08581 1390 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 NRXN3Q9Y4C0 1643 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 SLC4A10Q6U841 1118 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 G2E3Q7L622 706 aa22.54■■□□□ 1.2
HPS3-204ENST00000462030 R3HCC1Q9Y3T6 440 aaKnown RBP22.54■■□□□ 1.2
HPS3-204ENST00000462030 ZNF500O60304 480 aaPredicted RBP22.53■■□□□ 1.2
HPS3-204ENST00000462030 HMMRO75330 724 aa22.53■■□□□ 1.2
HPS3-204ENST00000462030 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.53■■□□□ 1.2
HPS3-204ENST00000462030 ZMYND15Q9H091 742 aa22.53■■□□□ 1.2
HPS3-204ENST00000462030 EXOC6BQ9Y2D4 811 aa22.52■■□□□ 1.2
HPS3-204ENST00000462030 PDCL3Q9H2J4 239 aa22.52■■□□□ 1.2
HPS3-204ENST00000462030 PALD1Q9ULE6 856 aa22.52■■□□□ 1.2
HPS3-204ENST00000462030 TUBGCP6Q96RT7 1819 aa22.52■■□□□ 1.19
HPS3-204ENST00000462030 CRB1P82279 1406 aa22.51■■□□□ 1.19
HPS3-204ENST00000462030 NOL8Q76FK4 1167 aaKnown RBP22.51■■□□□ 1.19
HPS3-204ENST00000462030 PRR36Q9H6K5 1346 aa22.51■■□□□ 1.19
HPS3-204ENST00000462030 ZKSCAN5Q9Y2L8 839 aa22.5■■□□□ 1.19
HPS3-204ENST00000462030 BRD1O95696 1058 aa22.5■■□□□ 1.19
HPS3-204ENST00000462030 RBM10P98175 930 aaKnown RBP22.5■■□□□ 1.19
HPS3-204ENST00000462030 RNF214Q8ND24 703 aa22.5■■□□□ 1.19
HPS3-204ENST00000462030 ESYT1Q9BSJ8 1104 aa22.5■■□□□ 1.19
HPS3-204ENST00000462030 TERF1P54274 439 aa22.49■■□□□ 1.19
HPS3-204ENST00000462030 SALL3Q9BXA9 1300 aa22.49■■□□□ 1.19
HPS3-204ENST00000462030 MBD3O95983 291 aa22.48■■□□□ 1.19
HPS3-204ENST00000462030 HSP90AB2PQ58FF8 381 aa22.48■■□□□ 1.19
HPS3-204ENST00000462030 PKNOX2Q96KN3 472 aa22.48■■□□□ 1.19
HPS3-204ENST00000462030 PEAK1Q9H792 1746 aa22.48■■□□□ 1.19
HPS3-204ENST00000462030 FOXO3O43524 673 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms