RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
C9orf78-204ENST00000461762 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
C9orf78-204ENST00000461762 RABEP1Q15276 862 aa18.7■□□□□ 0.58
C9orf78-204ENST00000461762 CEP85Q6P2H3 762 aa18.7■□□□□ 0.58
C9orf78-204ENST00000461762 NRKQ7Z2Y5 1582 aa18.7■□□□□ 0.58
C9orf78-204ENST00000461762 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
C9orf78-204ENST00000461762 PTPRCP08575 1304 aa18.69■□□□□ 0.58
C9orf78-204ENST00000461762 TTC21BQ7Z4L5 1316 aa18.69■□□□□ 0.58
C9orf78-204ENST00000461762 SSFA2P28290 1259 aa18.69■□□□□ 0.58
C9orf78-204ENST00000461762 MLECQ14165 292 aa18.69■□□□□ 0.58
C9orf78-204ENST00000461762 AKAP12Q02952 1782 aa18.68■□□□□ 0.58
C9orf78-204ENST00000461762 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
C9orf78-204ENST00000461762 CLCN1P35523 988 aa18.68■□□□□ 0.58
C9orf78-204ENST00000461762 ESF1Q9H501 851 aaKnown RBP18.68■□□□□ 0.58
C9orf78-204ENST00000461762 MCM10Q7L590 875 aa18.68■□□□□ 0.58
C9orf78-204ENST00000461762 OTUD7AQ8TE49 926 aaPredicted RBP18.68■□□□□ 0.58
C9orf78-204ENST00000461762 CRB1P82279 1406 aa18.66■□□□□ 0.58
C9orf78-204ENST00000461762 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
C9orf78-204ENST00000461762 SDSP20132 328 aa18.66■□□□□ 0.58
C9orf78-204ENST00000461762 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
C9orf78-204ENST00000461762 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
C9orf78-204ENST00000461762 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
C9orf78-204ENST00000461762 MEIS3Q99687 375 aa18.65■□□□□ 0.58
C9orf78-204ENST00000461762 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.58
C9orf78-204ENST00000461762 MSH6P52701 1360 aa18.64■□□□□ 0.57
C9orf78-204ENST00000461762 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
C9orf78-204ENST00000461762 ACEP12821 1306 aa18.64■□□□□ 0.57
C9orf78-204ENST00000461762 TNRQ92752 1358 aa18.64■□□□□ 0.57
C9orf78-204ENST00000461762 SMARCA5O60264 1052 aaPredicted RBP18.63■□□□□ 0.57
C9orf78-204ENST00000461762 USP31Q70CQ4 1352 aa18.63■□□□□ 0.57
C9orf78-204ENST00000461762 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
C9orf78-204ENST00000461762 KIF13AQ9H1H9 1805 aa18.63■□□□□ 0.57
C9orf78-204ENST00000461762 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
C9orf78-204ENST00000461762 ITSN1Q15811 1721 aa18.62■□□□□ 0.57
C9orf78-204ENST00000461762 GOLGA6L22H0YM25 854 aa18.62■□□□□ 0.57
C9orf78-204ENST00000461762 KLHL40Q2TBA0 621 aa18.62■□□□□ 0.57
C9orf78-204ENST00000461762 NUCB2P80303 420 aa18.61■□□□□ 0.57
C9orf78-204ENST00000461762 OSBPL3Q9H4L5 887 aa18.61■□□□□ 0.57
C9orf78-204ENST00000461762 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
C9orf78-204ENST00000461762 TMEM2Q9UHN6 1383 aa18.6■□□□□ 0.57
C9orf78-204ENST00000461762 CASC1Q6TDU7 716 aa18.6■□□□□ 0.57
C9orf78-204ENST00000461762 USP6P35125 1406 aa18.6■□□□□ 0.57
C9orf78-204ENST00000461762 RGPD1P0DJD0 1748 aa18.59■□□□□ 0.57
C9orf78-204ENST00000461762 ADAMTS13Q76LX8 1427 aa18.59■□□□□ 0.57
C9orf78-204ENST00000461762 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
C9orf78-204ENST00000461762 UBR1Q8IWV7 1749 aa18.59■□□□□ 0.57
C9orf78-204ENST00000461762 PEAK1Q9H792 1746 aa18.59■□□□□ 0.57
C9orf78-204ENST00000461762 ESPNB1AK53 854 aa18.59■□□□□ 0.57
C9orf78-204ENST00000461762 SSH2Q76I76 1423 aa18.58■□□□□ 0.57
C9orf78-204ENST00000461762 ARHGEF10O15013 1369 aa18.58■□□□□ 0.57
C9orf78-204ENST00000461762 HMMRO75330 724 aa18.58■□□□□ 0.56
C9orf78-204ENST00000461762 G2E3Q7L622 706 aa18.58■□□□□ 0.56
C9orf78-204ENST00000461762 MIS18AQ9NYP9 233 aa18.58■□□□□ 0.56
C9orf78-204ENST00000461762 APBB1O00213 710 aa18.57■□□□□ 0.56
C9orf78-204ENST00000461762 REC8O95072 547 aa18.57■□□□□ 0.56
C9orf78-204ENST00000461762 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
C9orf78-204ENST00000461762 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
C9orf78-204ENST00000461762 CCT4P50991 539 aaKnown RBP18.57■□□□□ 0.56
C9orf78-204ENST00000461762 ERBB4Q15303 1308 aa18.57■□□□□ 0.56
C9orf78-204ENST00000461762 MAP3K19Q56UN5 1328 aa18.57■□□□□ 0.56
C9orf78-204ENST00000461762 FOXO3O43524 673 aa18.56■□□□□ 0.56
C9orf78-204ENST00000461762 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.56■□□□□ 0.56
C9orf78-204ENST00000461762 ERC2O15083 957 aa18.56■□□□□ 0.56
C9orf78-204ENST00000461762 ST18O60284 1047 aa18.56■□□□□ 0.56
C9orf78-204ENST00000461762 PDE1AP54750 535 aa18.56■□□□□ 0.56
C9orf78-204ENST00000461762 LMBRD1Q9NUN5 540 aa18.55■□□□□ 0.56
C9orf78-204ENST00000461762 TOPAZ1Q8N9V7 1692 aa18.55■□□□□ 0.56
C9orf78-204ENST00000461762 TSPYL4Q9UJ04 414 aa18.55■□□□□ 0.56
C9orf78-204ENST00000461762 NALCNQ8IZF0 1738 aa18.55■□□□□ 0.56
C9orf78-204ENST00000461762 PLEKHG1Q9ULL1 1385 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 F6X3S4 739 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 PKP1Q13835 747 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 PPP1R9BQ96SB3 815 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 KDRP35968 1356 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 NUTM2FA1L443 756 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 ZNF445P59923 1031 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 RTF1Q92541 710 aaKnown RBP18.54■□□□□ 0.56
C9orf78-204ENST00000461762 SALL3Q9BXA9 1300 aa18.54■□□□□ 0.56
C9orf78-204ENST00000461762 SLC4A10Q6U841 1118 aa18.53■□□□□ 0.56
C9orf78-204ENST00000461762 ZGPATQ8N5A5 531 aaKnown RBP18.53■□□□□ 0.56
C9orf78-204ENST00000461762 ZDHHC9Q9Y397 364 aa18.53■□□□□ 0.56
C9orf78-204ENST00000461762 TTC21AQ8NDW8 1320 aa18.52■□□□□ 0.56
C9orf78-204ENST00000461762 GNAI2P04899 355 aa18.52■□□□□ 0.56
C9orf78-204ENST00000461762 TRIM44Q96DX7 344 aaPredicted RBP18.52■□□□□ 0.56
C9orf78-204ENST00000461762 LTKP29376 864 aa18.52■□□□□ 0.55
C9orf78-204ENST00000461762 CCDC173Q0VFZ6 552 aa18.52■□□□□ 0.55
C9orf78-204ENST00000461762 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
C9orf78-204ENST00000461762 PRKCSHP14314 528 aaPredicted RBP18.51■□□□□ 0.55
C9orf78-204ENST00000461762 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
C9orf78-204ENST00000461762 EYA1Q99502 592 aa18.5■□□□□ 0.55
C9orf78-204ENST00000461762 IGSF1Q8N6C5 1336 aa18.5■□□□□ 0.55
C9orf78-204ENST00000461762 FLT4P35916 1363 aa18.5■□□□□ 0.55
C9orf78-204ENST00000461762 SOX12O15370 315 aa18.5■□□□□ 0.55
C9orf78-204ENST00000461762 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
C9orf78-204ENST00000461762 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
C9orf78-204ENST00000461762 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
C9orf78-204ENST00000461762 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
C9orf78-204ENST00000461762 NAP1L5Q96NT1 182 aaPredicted RBP18.48■□□□□ 0.55
C9orf78-204ENST00000461762 EXOC6BQ9Y2D4 811 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms