RNA–Protein interactions for RNA: ENST00000461294.2

PDGFRA-202, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-202ENST00000461294 MSH5O43196 834 aa11.67□□□□□ -0.54
PDGFRA-202ENST00000461294 CDCA8Q53HL2 280 aa11.66□□□□□ -0.54
PDGFRA-202ENST00000461294 MSL1Q68DK7 614 aa11.66□□□□□ -0.54
PDGFRA-202ENST00000461294 CCDC61Q9Y6R9 512 aa11.66□□□□□ -0.54
PDGFRA-202ENST00000461294 EVC2Q86UK5 1308 aa11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 RGPD5Q99666 1765 aa11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 KCNQ4P56696 695 aa11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 TMF1P82094 1093 aa11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 PUS7Q96PZ0 661 aaKnown RBP11.65□□□□□ -0.54
PDGFRA-202ENST00000461294 CCDC7Q96M83 1385 aa11.65□□□□□ -0.55
PDGFRA-202ENST00000461294 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
PDGFRA-202ENST00000461294 TESK2Q96S53 571 aa11.64□□□□□ -0.55
PDGFRA-202ENST00000461294 NLRP6P59044 892 aa11.63□□□□□ -0.55
PDGFRA-202ENST00000461294 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
PDGFRA-202ENST00000461294 ABCC6O95255 1503 aa11.63□□□□□ -0.55
PDGFRA-202ENST00000461294 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
PDGFRA-202ENST00000461294 PPIP5K1Q6PFW1 1433 aa11.61□□□□□ -0.55
PDGFRA-202ENST00000461294 SRPK2P78362 688 aaKnown RBP11.61□□□□□ -0.55
PDGFRA-202ENST00000461294 MLLT1Q03111 559 aaPredicted RBP11.61□□□□□ -0.55
PDGFRA-202ENST00000461294 ARHGEF25Q86VW2 580 aa11.61□□□□□ -0.55
PDGFRA-202ENST00000461294 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
PDGFRA-202ENST00000461294 SLIT3O75094 1523 aa11.6□□□□□ -0.55
PDGFRA-202ENST00000461294 LY75O60449 1722 aa11.6□□□□□ -0.55
PDGFRA-202ENST00000461294 FLAD1Q8NFF5 587 aa11.6□□□□□ -0.55
PDGFRA-202ENST00000461294 PIK3C2AO00443 1686 aa11.59□□□□□ -0.55
PDGFRA-202ENST00000461294 CPSF1Q10570 1443 aaKnown RBP11.59□□□□□ -0.55
PDGFRA-202ENST00000461294 C10orf71Q711Q0 1435 aa11.59□□□□□ -0.55
PDGFRA-202ENST00000461294 KDM2BQ8NHM5 1336 aa11.59□□□□□ -0.55
PDGFRA-202ENST00000461294 IL2RBP14784 551 aa11.58□□□□□ -0.56
PDGFRA-202ENST00000461294 RGS19P49795 217 aa11.58□□□□□ -0.56
PDGFRA-202ENST00000461294 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
PDGFRA-202ENST00000461294 CCNL1Q9UK58 526 aaPredicted RBP11.58□□□□□ -0.56
PDGFRA-202ENST00000461294 PDE4DIPQ5VU43 2346 aa11.58□□□□□ -0.56
PDGFRA-202ENST00000461294 ARHGAP27Q6ZUM4 889 aa11.57□□□□□ -0.56
PDGFRA-202ENST00000461294 PLEKHG2Q9H7P9 1386 aa11.56□□□□□ -0.56
PDGFRA-202ENST00000461294 FOXN1O15353 648 aa11.56□□□□□ -0.56
PDGFRA-202ENST00000461294 HMGB2P26583 209 aaKnown RBP11.56□□□□□ -0.56
PDGFRA-202ENST00000461294 KCNH5Q8NCM2 988 aa11.56□□□□□ -0.56
PDGFRA-202ENST00000461294 ABHD8Q96I13 439 aa11.56□□□□□ -0.56
PDGFRA-202ENST00000461294 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
PDGFRA-202ENST00000461294 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
PDGFRA-202ENST00000461294 C9orf131Q5VYM1 1079 aa11.55□□□□□ -0.56
PDGFRA-202ENST00000461294 SYTL4Q96C24 671 aaPredicted RBP11.55□□□□□ -0.56
PDGFRA-202ENST00000461294 BCS1LQ9Y276 419 aa11.54□□□□□ -0.56
PDGFRA-202ENST00000461294 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
PDGFRA-202ENST00000461294 KCPQ6ZWJ8 1503 aa11.54□□□□□ -0.56
PDGFRA-202ENST00000461294 QRICH2Q9H0J4 1663 aa11.53□□□□□ -0.56
PDGFRA-202ENST00000461294 TNRC6CQ9HCJ0 1690 aaKnown RBP11.53□□□□□ -0.56
PDGFRA-202ENST00000461294 CTCFP49711 727 aaPredicted RBP11.53□□□□□ -0.56
PDGFRA-202ENST00000461294 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
PDGFRA-202ENST00000461294 KIF7Q2M1P5 1343 aa11.53□□□□□ -0.56
PDGFRA-202ENST00000461294 ANKRD36BQ8N2N9 1353 aa11.53□□□□□ -0.56
PDGFRA-202ENST00000461294 TGFB2P61812 414 aa11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 DDX54Q8TDD1 881 aaKnown RBP11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 TMC1Q8TDI8 760 aa11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 TERF2IPQ9NYB0 399 aa11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 CABP1Q9NZU7 370 aa11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
PDGFRA-202ENST00000461294 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-202ENST00000461294 HDGFL2Q7Z4V5 671 aaPredicted RBP11.51□□□□□ -0.57
PDGFRA-202ENST00000461294 NSD2O96028 1365 aa11.51□□□□□ -0.57
PDGFRA-202ENST00000461294 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
PDGFRA-202ENST00000461294 N4BP2Q86UW6 1770 aaPredicted RBP11.5□□□□□ -0.57
PDGFRA-202ENST00000461294 POLR3GLQ9BT43 218 aa11.5□□□□□ -0.57
PDGFRA-202ENST00000461294 KIF13BQ9NQT8 1826 aa11.5□□□□□ -0.57
PDGFRA-202ENST00000461294 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
PDGFRA-202ENST00000461294 C5P01031 1676 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 A0A0G2JLW4 131 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 SOX12O15370 315 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 AIDAQ96BJ3 306 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 ERBB3P21860 1342 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 SBF1O95248 1867 aa11.49□□□□□ -0.57
PDGFRA-202ENST00000461294 FCHSD2O94868 740 aa11.48□□□□□ -0.57
PDGFRA-202ENST00000461294 VEGFAP15692 232 aaPredicted RBP11.48□□□□□ -0.57
PDGFRA-202ENST00000461294 LBX1P52954 281 aa11.48□□□□□ -0.57
PDGFRA-202ENST00000461294 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
PDGFRA-202ENST00000461294 MKRN1Q9UHC7 482 aaKnown RBP11.48□□□□□ -0.57
PDGFRA-202ENST00000461294 KIAA1551Q9HCM1 1747 aa11.48□□□□□ -0.57
PDGFRA-202ENST00000461294 ARFGEF1Q9Y6D6 1849 aa11.47□□□□□ -0.57
PDGFRA-202ENST00000461294 CCDC85CA6NKD9 419 aa11.47□□□□□ -0.57
PDGFRA-202ENST00000461294 RNF181Q9P0P0 153 aa11.47□□□□□ -0.57
PDGFRA-202ENST00000461294 BRCA1P38398 1863 aaKnown RBP11.46□□□□□ -0.57
PDGFRA-202ENST00000461294 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.57
PDGFRA-202ENST00000461294 SMIM5Q71RC9 77 aa11.46□□□□□ -0.57
PDGFRA-202ENST00000461294 NFAT5O94916 1531 aa11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 KTN1Q86UP2 1357 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 UBR3Q6ZT12 1888 aa11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 AMIGO3Q86WK7 504 aa11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 AK7Q96M32 723 aa11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
PDGFRA-202ENST00000461294 TNRC18O15417 2968 aaPredicted RBP11.44□□□□□ -0.58
PDGFRA-202ENST00000461294 TTC21AQ8NDW8 1320 aa11.44□□□□□ -0.58
PDGFRA-202ENST00000461294 DPEP1P16444 411 aa11.44□□□□□ -0.58
PDGFRA-202ENST00000461294 ANKRD24Q8TF21 1146 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms