RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	DIAPH1	O60610	1272 aa	Known RBP	13.87	□□□□□ -0.19
MRPL55-223	ENST00000459783	TAT	P17735	454 aa	Predicted RBP	13.87	□□□□□ -0.19
MRPL55-223	ENST00000459783	FAM196A	Q6ZSG2	479 aa		13.87	□□□□□ -0.19
MRPL55-223	ENST00000459783	ZCRB1	Q8TBF4	217 aa	Known RBP	13.87	□□□□□ -0.19
MRPL55-223	ENST00000459783	EP400	Q96L91	3159 aa		13.87	□□□□□ -0.19
MRPL55-223	ENST00000459783	CYP27B1	O15528	508 aa		13.86	□□□□□ -0.19
MRPL55-223	ENST00000459783	TRIM37	O94972	964 aa		13.86	□□□□□ -0.19
MRPL55-223	ENST00000459783	SULT6B1	Q6IMI4	303 aa		13.86	□□□□□ -0.19
MRPL55-223	ENST00000459783	DDX54	Q8TDD1	881 aa	Known RBP	13.86	□□□□□ -0.19
MRPL55-223	ENST00000459783	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.86	□□□□□ -0.19
MRPL55-223	ENST00000459783	KCNQ2	O43526	872 aa		13.85	□□□□□ -0.19
MRPL55-223	ENST00000459783	HMOX1	P09601	288 aa		13.85	□□□□□ -0.19
MRPL55-223	ENST00000459783	RALBP1	Q15311	655 aa		13.85	□□□□□ -0.19
MRPL55-223	ENST00000459783	DEFB132	Q7Z7B7	95 aa		13.85	□□□□□ -0.19
MRPL55-223	ENST00000459783	SBF2	Q86WG5	1849 aa		13.83	□□□□□ -0.2
MRPL55-223	ENST00000459783	ACSBG1	Q96GR2	724 aa		13.83	□□□□□ -0.2
MRPL55-223	ENST00000459783	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
MRPL55-223	ENST00000459783	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.82	□□□□□ -0.2
MRPL55-223	ENST00000459783	PCDH11X	Q9BZA7	1347 aa		13.82	□□□□□ -0.2
MRPL55-223	ENST00000459783	PCDH11Y	Q9BZA8	1340 aa		13.82	□□□□□ -0.2
MRPL55-223	ENST00000459783	PLEKHG2	Q9H7P9	1386 aa		13.82	□□□□□ -0.2
MRPL55-223	ENST00000459783	NHS	Q6T4R5	1651 aa		13.82	□□□□□ -0.2
MRPL55-223	ENST00000459783	TOGARAM1	Q9Y4F4	1720 aa		13.81	□□□□□ -0.2
MRPL55-223	ENST00000459783	U2SURP	O15042	1029 aa	Known RBP	13.81	□□□□□ -0.2
MRPL55-223	ENST00000459783	CCDC125	Q86Z20	511 aa		13.81	□□□□□ -0.2
MRPL55-223	ENST00000459783	CFAP53	Q96M91	514 aa		13.81	□□□□□ -0.2
MRPL55-223	ENST00000459783	PHKG2	P15735	406 aa		13.8	□□□□□ -0.2
MRPL55-223	ENST00000459783	EN1	Q05925	392 aa	Predicted RBP	13.8	□□□□□ -0.2
MRPL55-223	ENST00000459783	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.8	□□□□□ -0.2
MRPL55-223	ENST00000459783	RSPH6A	Q9H0K4	717 aa		13.8	□□□□□ -0.2
MRPL55-223	ENST00000459783	DOT1L	Q8TEK3	1739 aa		13.8	□□□□□ -0.2
MRPL55-223	ENST00000459783	NKX1-1	Q15270	411 aa	Predicted RBP	13.79	□□□□□ -0.2
MRPL55-223	ENST00000459783	CCDC184	Q52MB2	194 aa		13.79	□□□□□ -0.2
MRPL55-223	ENST00000459783	CAMKK2	Q96RR4	588 aa		13.79	□□□□□ -0.2
MRPL55-223	ENST00000459783	SPG7	Q9UQ90	795 aa		13.79	□□□□□ -0.2
MRPL55-223	ENST00000459783	KDM6A	O15550	1401 aa	Predicted RBP	13.79	□□□□□ -0.2
MRPL55-223	ENST00000459783	APBA3	O96018	575 aa		13.78	□□□□□ -0.2
MRPL55-223	ENST00000459783	PRIM1	P49642	420 aa	Known RBP	13.78	□□□□□ -0.2
MRPL55-223	ENST00000459783	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	EZH2	Q15910	746 aa	Known RBP	13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	MTHFSD	Q2M296	383 aa	Known RBP	13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	PHACTR3	Q96KR7	559 aa		13.77	□□□□□ -0.21
MRPL55-223	ENST00000459783	PRKAR2B	P31323	418 aa		13.76	□□□□□ -0.21
MRPL55-223	ENST00000459783	BAG6	P46379	1132 aa		13.76	□□□□□ -0.21
MRPL55-223	ENST00000459783	SF3B2	Q13435	895 aa	Known RBP	13.76	□□□□□ -0.21
MRPL55-223	ENST00000459783	IFNL2	Q8IZJ0	200 aa		13.76	□□□□□ -0.21
MRPL55-223	ENST00000459783	PROM2	Q8N271	834 aa		13.76	□□□□□ -0.21
MRPL55-223	ENST00000459783	AMOT	Q4VCS5	1084 aa		13.75	□□□□□ -0.21
MRPL55-223	ENST00000459783	NUDC	Q9Y266	331 aa		13.75	□□□□□ -0.21
MRPL55-223	ENST00000459783	BTAF1	O14981	1849 aa		13.75	□□□□□ -0.21
MRPL55-223	ENST00000459783	RREB1	Q92766	1687 aa		13.74	□□□□□ -0.21
MRPL55-223	ENST00000459783	PLSCR1	O15162	318 aa		13.73	□□□□□ -0.21
MRPL55-223	ENST00000459783	FCHSD2	O94868	740 aa		13.73	□□□□□ -0.21
MRPL55-223	ENST00000459783	MPRIP	Q6WCQ1	1025 aa		13.73	□□□□□ -0.21
MRPL55-223	ENST00000459783	SYTL4	Q96C24	671 aa	Predicted RBP	13.73	□□□□□ -0.21
MRPL55-223	ENST00000459783	PLEKHF1	Q96S99	279 aa		13.73	□□□□□ -0.21
MRPL55-223	ENST00000459783	ADAMTS7	Q9UKP4	1686 aa		13.72	□□□□□ -0.21
MRPL55-223	ENST00000459783	PIGB	Q92521	554 aa		13.72	□□□□□ -0.21
MRPL55-223	ENST00000459783	LGR6	Q9HBX8	967 aa		13.72	□□□□□ -0.21
MRPL55-223	ENST00000459783	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.72	□□□□□ -0.21
MRPL55-223	ENST00000459783	RGPD4	Q7Z3J3	1758 aa		13.72	□□□□□ -0.21
MRPL55-223	ENST00000459783	NUP188	Q5SRE5	1749 aa		13.72	□□□□□ -0.21
MRPL55-223	ENST00000459783	AKAP4	Q5JQC9	854 aa		13.71	□□□□□ -0.21
MRPL55-223	ENST00000459783	DCAF5	Q96JK2	942 aa		13.71	□□□□□ -0.21
MRPL55-223	ENST00000459783	ITGB4	P16144	1822 aa		13.71	□□□□□ -0.22
MRPL55-223	ENST00000459783	MRC1	P22897	1456 aa		13.7	□□□□□ -0.22
MRPL55-223	ENST00000459783	TXNRD1	Q16881	649 aa		13.7	□□□□□ -0.22
MRPL55-223	ENST00000459783	C1orf141	Q5JVX7	400 aa		13.7	□□□□□ -0.22
MRPL55-223	ENST00000459783	LRRC4B	Q9NT99	713 aa		13.7	□□□□□ -0.22
MRPL55-223	ENST00000459783	RNMT	O43148	476 aa	Known RBP	13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	ANP32C	O43423	234 aa		13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	KCNQ4	P56696	695 aa		13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	IL17RE	Q8NFR9	667 aa		13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	ADAMTS8	Q9UP79	889 aa		13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	MAP3K5	Q99683	1374 aa		13.69	□□□□□ -0.22
MRPL55-223	ENST00000459783	PAPPA	Q13219	1627 aa		13.68	□□□□□ -0.22
MRPL55-223	ENST00000459783	ERVV-2	B6SEH9	535 aa		13.68	□□□□□ -0.22
MRPL55-223	ENST00000459783	HSP90AB1	P08238	724 aa	Known RBP	13.68	□□□□□ -0.22
MRPL55-223	ENST00000459783	GAS2L2	Q8NHY3	880 aa		13.68	□□□□□ -0.22
MRPL55-223	ENST00000459783	ASAP1	Q9ULH1	1129 aa		13.68	□□□□□ -0.22
MRPL55-223	ENST00000459783	SCN11A	Q9UI33	1791 aa		13.68	□□□□□ -0.22
MRPL55-223	ENST00000459783	LY75	O60449	1722 aa		13.67	□□□□□ -0.22
MRPL55-223	ENST00000459783	ATG3	Q9NT62	314 aa		13.67	□□□□□ -0.22
MRPL55-223	ENST00000459783	TMOD3	Q9NYL9	352 aa		13.67	□□□□□ -0.22
MRPL55-223	ENST00000459783	CEMIP	Q8WUJ3	1361 aa		13.67	□□□□□ -0.22
MRPL55-223	ENST00000459783	PALLD	Q8WX93	1383 aa		13.67	□□□□□ -0.22
MRPL55-223	ENST00000459783	CCDC146	Q8IYE0	955 aa		13.66	□□□□□ -0.22
MRPL55-223	ENST00000459783	NFATC2IP	Q8NCF5	419 aa		13.66	□□□□□ -0.22
MRPL55-223	ENST00000459783	SLC4A9	Q96Q91	983 aa		13.66	□□□□□ -0.22
MRPL55-223	ENST00000459783	GNAT3	A8MTJ3	354 aa		13.65	□□□□□ -0.22
MRPL55-223	ENST00000459783	CABP4	P57796	275 aa		13.65	□□□□□ -0.22
MRPL55-223	ENST00000459783	DCTN1	Q14203	1278 aa		13.65	□□□□□ -0.22
MRPL55-223	ENST00000459783	SLC52A2	Q9HAB3	445 aa		13.65	□□□□□ -0.22
MRPL55-223	ENST00000459783	PSD	A5PKW4	1024 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-223	ENST00000459783	ZNF827	Q17R98	1081 aa		13.64	□□□□□ -0.23
MRPL55-223	ENST00000459783	MCM10	Q7L590	875 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms