RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 TSHZ3Q63HK5 1081 aa17.53■□□□□ 0.4
SCFD1-203ENST00000458591 ATP10DQ9P241 1426 aa17.53■□□□□ 0.4
SCFD1-203ENST00000458591 ACEP12821 1306 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 GBP4Q96PP9 640 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 USP26Q9BXU7 913 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.4
SCFD1-203ENST00000458591 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.4
SCFD1-203ENST00000458591 ERBB4Q15303 1308 aa17.51■□□□□ 0.39
SCFD1-203ENST00000458591 RTL1A6NKG5 1358 aa17.5■□□□□ 0.39
SCFD1-203ENST00000458591 SPATA31D1Q6ZQQ2 1576 aa17.5■□□□□ 0.39
SCFD1-203ENST00000458591 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
SCFD1-203ENST00000458591 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
SCFD1-203ENST00000458591 MTHFSDQ2M296 383 aaKnown RBP17.48■□□□□ 0.39
SCFD1-203ENST00000458591 ZGPATQ8N5A5 531 aaKnown RBP17.48■□□□□ 0.39
SCFD1-203ENST00000458591 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
SCFD1-203ENST00000458591 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
SCFD1-203ENST00000458591 SLC26A8Q96RN1 970 aa17.47■□□□□ 0.39
SCFD1-203ENST00000458591 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
SCFD1-203ENST00000458591 MCTP1Q6DN14 999 aa17.47■□□□□ 0.39
SCFD1-203ENST00000458591 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
SCFD1-203ENST00000458591 ESF1Q9H501 851 aaKnown RBP17.47■□□□□ 0.39
SCFD1-203ENST00000458591 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
SCFD1-203ENST00000458591 AK9Q5TCS8 1911 aa17.46■□□□□ 0.38
SCFD1-203ENST00000458591 LTKP29376 864 aa17.45■□□□□ 0.38
SCFD1-203ENST00000458591 RABEP1Q15276 862 aa17.45■□□□□ 0.38
SCFD1-203ENST00000458591 FOXD4L5Q5VV16 416 aaPredicted RBP17.45■□□□□ 0.38
SCFD1-203ENST00000458591 FOXD4L4Q8WXT5 416 aaPredicted RBP17.45■□□□□ 0.38
SCFD1-203ENST00000458591 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
SCFD1-203ENST00000458591 DDX49Q9Y6V7 483 aaKnown RBP17.45■□□□□ 0.38
SCFD1-203ENST00000458591 TSPYL4Q9UJ04 414 aa17.45■□□□□ 0.38
SCFD1-203ENST00000458591 CRB1P82279 1406 aa17.45■□□□□ 0.38
SCFD1-203ENST00000458591 C3P01024 1663 aa17.44■□□□□ 0.38
SCFD1-203ENST00000458591 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
SCFD1-203ENST00000458591 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
SCFD1-203ENST00000458591 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
SCFD1-203ENST00000458591 NAP1L5Q96NT1 182 aaPredicted RBP17.44■□□□□ 0.38
SCFD1-203ENST00000458591 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
SCFD1-203ENST00000458591 UBE2Q2Q8WVN8 375 aa17.43■□□□□ 0.38
SCFD1-203ENST00000458591 CLCN1P35523 988 aa17.43■□□□□ 0.38
SCFD1-203ENST00000458591 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
SCFD1-203ENST00000458591 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
SCFD1-203ENST00000458591 AGLP35573 1532 aa17.42■□□□□ 0.38
SCFD1-203ENST00000458591 CEBPAP49715 358 aaPredicted RBP17.42■□□□□ 0.38
SCFD1-203ENST00000458591 SKOR2Q2VWA4 1001 aaPredicted RBP17.42■□□□□ 0.38
SCFD1-203ENST00000458591 PTPRCP08575 1304 aa17.41■□□□□ 0.38
SCFD1-203ENST00000458591 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
SCFD1-203ENST00000458591 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
SCFD1-203ENST00000458591 ZDHHC9Q9Y397 364 aa17.41■□□□□ 0.38
SCFD1-203ENST00000458591 RIMS1Q86UR5 1692 aaKnown RBP17.41■□□□□ 0.38
SCFD1-203ENST00000458591 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
SCFD1-203ENST00000458591 ESPNB1AK53 854 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 PDE1AP54750 535 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 NOL8Q76FK4 1167 aaKnown RBP17.4■□□□□ 0.38
SCFD1-203ENST00000458591 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 EYA1Q99502 592 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 DIP2BQ9P265 1576 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 PNMA6EA0A0J9YXQ4 647 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 PTMSP20962 102 aa17.4■□□□□ 0.38
SCFD1-203ENST00000458591 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
SCFD1-203ENST00000458591 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
SCFD1-203ENST00000458591 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
SCFD1-203ENST00000458591 TECPR2O15040 1411 aa17.39■□□□□ 0.37
SCFD1-203ENST00000458591 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.39■□□□□ 0.37
SCFD1-203ENST00000458591 PLEKHG3A1L390 1219 aa17.39■□□□□ 0.37
SCFD1-203ENST00000458591 CYP2E1P05181 493 aaPredicted RBP17.39■□□□□ 0.37
SCFD1-203ENST00000458591 LMBRD1Q9NUN5 540 aa17.39■□□□□ 0.37
SCFD1-203ENST00000458591 USP6P35125 1406 aa17.39■□□□□ 0.37
SCFD1-203ENST00000458591 ADAMTS13Q76LX8 1427 aa17.39■□□□□ 0.37
SCFD1-203ENST00000458591 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
SCFD1-203ENST00000458591 TMEM2Q9UHN6 1383 aa17.38■□□□□ 0.37
SCFD1-203ENST00000458591 PRPF40AO75400 957 aaKnown RBP17.38■□□□□ 0.37
SCFD1-203ENST00000458591 NRKQ7Z2Y5 1582 aa17.38■□□□□ 0.37
SCFD1-203ENST00000458591 GOLGA6L22H0YM25 854 aa17.38■□□□□ 0.37
SCFD1-203ENST00000458591 KLHL40Q2TBA0 621 aa17.38■□□□□ 0.37
SCFD1-203ENST00000458591 PALD1Q9ULE6 856 aa17.38■□□□□ 0.37
SCFD1-203ENST00000458591 TNRQ92752 1358 aa17.37■□□□□ 0.37
SCFD1-203ENST00000458591 ERC2O15083 957 aa17.37■□□□□ 0.37
SCFD1-203ENST00000458591 CLEC17AQ6ZS10 378 aa17.37■□□□□ 0.37
SCFD1-203ENST00000458591 LTV1Q96GA3 475 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-203ENST00000458591 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
SCFD1-203ENST00000458591 ITSN1Q15811 1721 aa17.37■□□□□ 0.37
SCFD1-203ENST00000458591 TRIM44Q96DX7 344 aaPredicted RBP17.37■□□□□ 0.37
SCFD1-203ENST00000458591 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 AMPHP49418 695 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 HDGFP51858 240 aaKnown RBP17.36■□□□□ 0.37
SCFD1-203ENST00000458591 FKBP5Q13451 457 aaPredicted RBP17.36■□□□□ 0.37
SCFD1-203ENST00000458591 CASC1Q6TDU7 716 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 NASPP49321 788 aaPredicted RBP17.36■□□□□ 0.37
SCFD1-203ENST00000458591 NEK4P51957 841 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 GPT2Q8TD30 523 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
SCFD1-203ENST00000458591 ST18O60284 1047 aa17.35■□□□□ 0.37
SCFD1-203ENST00000458591 HMMRO75330 724 aa17.35■□□□□ 0.37
SCFD1-203ENST00000458591 GNAI2P04899 355 aa17.35■□□□□ 0.37
SCFD1-203ENST00000458591 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
SCFD1-203ENST00000458591 NUCB2P80303 420 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms