RNA–Protein interactions for RNA: ENST00000457215.5

ITM2C-206, Transcript of integral membrane protein 2C, humanhuman

TSL 4

Gene ITM2C, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-206ENST00000457215 NHSQ6T4R5 1651 aa22.33■■□□□ 1.16
ITM2C-206ENST00000457215 ACSBG1Q96GR2 724 aa22.32■■□□□ 1.16
ITM2C-206ENST00000457215 PARD3Q8TEW0 1356 aa22.31■■□□□ 1.16
ITM2C-206ENST00000457215 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
ITM2C-206ENST00000457215 PLSCR1O15162 318 aa22.31■■□□□ 1.16
ITM2C-206ENST00000457215 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
ITM2C-206ENST00000457215 PROM2Q8N271 834 aa22.3■■□□□ 1.16
ITM2C-206ENST00000457215 RAPGEF4Q8WZA2 1011 aa22.3■■□□□ 1.16
ITM2C-206ENST00000457215 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
ITM2C-206ENST00000457215 TATP17735 454 aaPredicted RBP22.29■■□□□ 1.16
ITM2C-206ENST00000457215 RGPD3A6NKT7 1758 aaPredicted RBP22.29■■□□□ 1.16
ITM2C-206ENST00000457215 RGPD4Q7Z3J3 1758 aa22.29■■□□□ 1.16
ITM2C-206ENST00000457215 IGSF1Q8N6C5 1336 aa22.28■■□□□ 1.16
ITM2C-206ENST00000457215 PKD1L3Q7Z443 1732 aa22.27■■□□□ 1.16
ITM2C-206ENST00000457215 KAT6BQ8WYB5 2073 aa22.26■■□□□ 1.15
ITM2C-206ENST00000457215 BTAF1O14981 1849 aa22.25■■□□□ 1.15
ITM2C-206ENST00000457215 CYP27B1O15528 508 aa22.25■■□□□ 1.15
ITM2C-206ENST00000457215 DOT1LQ8TEK3 1739 aa22.24■■□□□ 1.15
ITM2C-206ENST00000457215 PSDA5PKW4 1024 aaPredicted RBP22.24■■□□□ 1.15
ITM2C-206ENST00000457215 IL13P35225 146 aa22.24■■□□□ 1.15
ITM2C-206ENST00000457215 MTHFSP49914 203 aa22.24■■□□□ 1.15
ITM2C-206ENST00000457215 SRCAPQ6ZRS2 3230 aa22.23■■□□□ 1.15
ITM2C-206ENST00000457215 PRIM1P49642 420 aaKnown RBP22.22■■□□□ 1.15
ITM2C-206ENST00000457215 CNGB1Q14028 1251 aaPredicted RBP22.22■■□□□ 1.15
ITM2C-206ENST00000457215 R3HDM1Q15032 1099 aaKnown RBP22.21■■□□□ 1.15
ITM2C-206ENST00000457215 PCDH11XQ9BZA7 1347 aa22.21■■□□□ 1.15
ITM2C-206ENST00000457215 PCDH11YQ9BZA8 1340 aa22.21■■□□□ 1.15
ITM2C-206ENST00000457215 TXNRD1Q16881 649 aa22.2■■□□□ 1.14
ITM2C-206ENST00000457215 AEBP1Q8IUX7 1158 aa22.2■■□□□ 1.14
ITM2C-206ENST00000457215 ANO8Q9HCE9 1232 aaPredicted RBP22.19■■□□□ 1.14
ITM2C-206ENST00000457215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.19■■□□□ 1.14
ITM2C-206ENST00000457215 TOGARAM1Q9Y4F4 1720 aa22.19■■□□□ 1.14
ITM2C-206ENST00000457215 COL3A1P02461 1466 aaPredicted RBP22.18■■□□□ 1.14
ITM2C-206ENST00000457215 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
ITM2C-206ENST00000457215 KDRP35968 1356 aa22.16■■□□□ 1.14
ITM2C-206ENST00000457215 SPG7Q9UQ90 795 aa22.16■■□□□ 1.14
ITM2C-206ENST00000457215 PLEKHG2Q9H7P9 1386 aa22.15■■□□□ 1.14
ITM2C-206ENST00000457215 SYTL4Q96C24 671 aaPredicted RBP22.15■■□□□ 1.14
ITM2C-206ENST00000457215 LRRC4BQ9NT99 713 aa22.15■■□□□ 1.14
ITM2C-206ENST00000457215 PHKG2P15735 406 aa22.14■■□□□ 1.13
ITM2C-206ENST00000457215 SULT6B1Q6IMI4 303 aa22.14■■□□□ 1.13
ITM2C-206ENST00000457215 ITGB4P16144 1822 aa22.13■■□□□ 1.13
ITM2C-206ENST00000457215 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
ITM2C-206ENST00000457215 NBPF14Q5TI25 921 aa22.12■■□□□ 1.13
ITM2C-206ENST00000457215 LY75O60449 1722 aa22.11■■□□□ 1.13
ITM2C-206ENST00000457215 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
ITM2C-206ENST00000457215 DIAPH1O60610 1272 aaKnown RBP22.1■■□□□ 1.13
ITM2C-206ENST00000457215 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
ITM2C-206ENST00000457215 HMOX1P09601 288 aa22.08■■□□□ 1.13
ITM2C-206ENST00000457215 KCNQ4P56696 695 aa22.08■■□□□ 1.13
ITM2C-206ENST00000457215 PLEKHO1Q53GL0 409 aaPredicted RBP22.08■■□□□ 1.13
ITM2C-206ENST00000457215 PDGFDQ9GZP0 370 aaPredicted RBP22.08■■□□□ 1.13
ITM2C-206ENST00000457215 LRP5O75197 1615 aa22.07■■□□□ 1.12
ITM2C-206ENST00000457215 MPRIPQ6WCQ1 1025 aa22.07■■□□□ 1.12
ITM2C-206ENST00000457215 PIGBQ92521 554 aa22.07■■□□□ 1.12
ITM2C-206ENST00000457215 SLC15A2Q16348 729 aa22.06■■□□□ 1.12
ITM2C-206ENST00000457215 ZNF827Q17R98 1081 aa22.06■■□□□ 1.12
ITM2C-206ENST00000457215 AMOTQ4VCS5 1084 aa22.06■■□□□ 1.12
ITM2C-206ENST00000457215 KDM6AO15550 1401 aaPredicted RBP22.06■■□□□ 1.12
ITM2C-206ENST00000457215 CASZ1Q86V15 1759 aa22.05■■□□□ 1.12
ITM2C-206ENST00000457215 DDX10Q13206 875 aaKnown RBP22.05■■□□□ 1.12
ITM2C-206ENST00000457215 SLC27A3Q5K4L6 730 aa22.05■■□□□ 1.12
ITM2C-206ENST00000457215 ZNF530Q6P9A1 599 aaPredicted RBP22.05■■□□□ 1.12
ITM2C-206ENST00000457215 ZEB1P37275 1124 aaPredicted RBP22.04■■□□□ 1.12
ITM2C-206ENST00000457215 AKT1S1Q96B36 256 aa22.04■■□□□ 1.12
ITM2C-206ENST00000457215 STK32BQ9NY57 414 aa22.03■■□□□ 1.12
ITM2C-206ENST00000457215 PALLDQ8WX93 1383 aa22.01■■□□□ 1.11
ITM2C-206ENST00000457215 DCAF5Q96JK2 942 aa22.01■■□□□ 1.11
ITM2C-206ENST00000457215 CCNL1Q9UK58 526 aaPredicted RBP22■■□□□ 1.11
ITM2C-206ENST00000457215 ASAP1Q9ULH1 1129 aa22■■□□□ 1.11
ITM2C-206ENST00000457215 ERVV-2B6SEH9 535 aa21.99■■□□□ 1.11
ITM2C-206ENST00000457215 U2SURPO15042 1029 aaKnown RBP21.99■■□□□ 1.11
ITM2C-206ENST00000457215 MTHFSDQ2M296 383 aaKnown RBP21.99■■□□□ 1.11
ITM2C-206ENST00000457215 TMOD3Q9NYL9 352 aa21.99■■□□□ 1.11
ITM2C-206ENST00000457215 HSP90AB1P08238 724 aaKnown RBP21.98■■□□□ 1.11
ITM2C-206ENST00000457215 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
ITM2C-206ENST00000457215 TUBGCP6Q96RT7 1819 aa21.98■■□□□ 1.11
ITM2C-206ENST00000457215 TAF1LQ8IZX4 1826 aa21.97■■□□□ 1.11
ITM2C-206ENST00000457215 AKAP4Q5JQC9 854 aa21.97■■□□□ 1.11
ITM2C-206ENST00000457215 C1orf141Q5JVX7 400 aa21.97■■□□□ 1.11
ITM2C-206ENST00000457215 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
ITM2C-206ENST00000457215 SCN11AQ9UI33 1791 aa21.97■■□□□ 1.11
ITM2C-206ENST00000457215 SMARCC1Q92922 1105 aaPredicted RBP21.96■■□□□ 1.11
ITM2C-206ENST00000457215 LGR6Q9HBX8 967 aa21.96■■□□□ 1.11
ITM2C-206ENST00000457215 QSER1Q2KHR3 1735 aa21.95■■□□□ 1.1
ITM2C-206ENST00000457215 RSPH6AQ9H0K4 717 aa21.95■■□□□ 1.1
ITM2C-206ENST00000457215 C5P01031 1676 aa21.95■■□□□ 1.1
ITM2C-206ENST00000457215 ADAMTS7Q9UKP4 1686 aa21.95■■□□□ 1.1
ITM2C-206ENST00000457215 PNPLA7Q6ZV29 1317 aa21.94■■□□□ 1.1
ITM2C-206ENST00000457215 ZBTB7AO95365 584 aa21.93■■□□□ 1.1
ITM2C-206ENST00000457215 PHACTR3Q96KR7 559 aa21.93■■□□□ 1.1
ITM2C-206ENST00000457215 SLC4A9Q96Q91 983 aa21.93■■□□□ 1.1
ITM2C-206ENST00000457215 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
ITM2C-206ENST00000457215 LOC102724428A0A0B4J2F2 783 aa21.92■■□□□ 1.1
ITM2C-206ENST00000457215 RNMTO43148 476 aaKnown RBP21.92■■□□□ 1.1
ITM2C-206ENST00000457215 SIK1P57059 783 aa21.92■■□□□ 1.1
ITM2C-206ENST00000457215 CABP4P57796 275 aa21.92■■□□□ 1.1
ITM2C-206ENST00000457215 NFATC2IPQ8NCF5 419 aa21.92■■□□□ 1.1
ITM2C-206ENST00000457215 PRKAR2BP31323 418 aa21.91■■□□□ 1.1
ITM2C-206ENST00000457215 ITPK1Q13572 414 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms