RNA–Protein interactions for RNA: ENST00000456923.5

FN1-213, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 3,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-213ENST00000456923 RGS17Q9UGC6 210 aaPredicted RBP8.65□□□□□ -1.02
FN1-213ENST00000456923 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
FN1-213ENST00000456923 ZNF772Q68DY9 489 aaPredicted RBP8.65□□□□□ -1.02
FN1-213ENST00000456923 ZNF592Q92610 1267 aa8.65□□□□□ -1.02
FN1-213ENST00000456923 KRT28Q7Z3Y7 464 aa8.65□□□□□ -1.03
FN1-213ENST00000456923 CARD11Q9BXL7 1154 aa8.65□□□□□ -1.03
FN1-213ENST00000456923 PDCL3Q9H2J4 239 aa8.65□□□□□ -1.03
FN1-213ENST00000456923 ACEP12821 1306 aa8.65□□□□□ -1.03
FN1-213ENST00000456923 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
FN1-213ENST00000456923 WASHC2AQ641Q2 1341 aa8.64□□□□□ -1.03
FN1-213ENST00000456923 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
FN1-213ENST00000456923 NUP188Q5SRE5 1749 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 RGS12O14924 1447 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 TRERF1Q96PN7 1200 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 LRP5O75197 1615 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 TNNT1P13805 278 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 PPP4R2Q9NY27 417 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 TTC21BQ7Z4L5 1316 aa8.63□□□□□ -1.03
FN1-213ENST00000456923 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
FN1-213ENST00000456923 HSP90B1P14625 803 aaKnown RBP8.63□□□□□ -1.03
FN1-213ENST00000456923 TMF1P82094 1093 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 VPS72Q15906 364 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 TMEM51Q9NW97 253 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 THRAP3Q9Y2W1 955 aaKnown RBP8.62□□□□□ -1.03
FN1-213ENST00000456923 EP400NLQ6ZTU2 488 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 BCCIPQ9P287 314 aaKnown RBP eCLIP8.62□□□□□ -1.03
FN1-213ENST00000456923 KDM2AQ9Y2K7 1162 aa8.62□□□□□ -1.03
FN1-213ENST00000456923 CNKSR2Q8WXI2 1034 aa8.61□□□□□ -1.03
FN1-213ENST00000456923 KTN1Q86UP2 1357 aaKnown RBP8.61□□□□□ -1.03
FN1-213ENST00000456923 MINK1Q8N4C8 1332 aaPredicted RBP8.61□□□□□ -1.03
FN1-213ENST00000456923 ESCO1Q5FWF5 840 aa8.61□□□□□ -1.03
FN1-213ENST00000456923 TRIM44Q96DX7 344 aaPredicted RBP8.61□□□□□ -1.03
FN1-213ENST00000456923 CRB1P82279 1406 aa8.61□□□□□ -1.03
FN1-213ENST00000456923 KCNH5Q8NCM2 988 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 STK26Q9P289 416 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 UBR2Q8IWV8 1755 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 CCDC7Q96M83 1385 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 MRC1P22897 1456 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 SCN11AQ9UI33 1791 aa8.6□□□□□ -1.03
FN1-213ENST00000456923 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
FN1-213ENST00000456923 TOGARAM1Q9Y4F4 1720 aa8.59□□□□□ -1.03
FN1-213ENST00000456923 CASZ1Q86V15 1759 aa8.59□□□□□ -1.03
FN1-213ENST00000456923 TNS2Q63HR2 1409 aa8.59□□□□□ -1.03
FN1-213ENST00000456923 C5P01031 1676 aa8.58□□□□□ -1.04
FN1-213ENST00000456923 OVOS2A0A0G2JMS6 1433 aa8.58□□□□□ -1.04
FN1-213ENST00000456923 ST20-MTHFSA0A0A6YYL1 179 aa8.58□□□□□ -1.04
FN1-213ENST00000456923 EIF4G2P78344 907 aaKnown RBP eCLIP8.58□□□□□ -1.04
FN1-213ENST00000456923 KIAA1211Q6ZU35 1233 aa8.58□□□□□ -1.04
FN1-213ENST00000456923 SPATA31A5Q5VU36 1347 aa8.58□□□□□ -1.04
FN1-213ENST00000456923 SPATA31A7Q8IWB4 1347 aa8.58□□□□□ -1.04
FN1-213ENST00000456923 PARD3Q8TEW0 1356 aa8.57□□□□□ -1.04
FN1-213ENST00000456923 COL5A3P25940 1745 aaPredicted RBP8.57□□□□□ -1.04
FN1-213ENST00000456923 ARHGEF25Q86VW2 580 aa8.57□□□□□ -1.04
FN1-213ENST00000456923 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
FN1-213ENST00000456923 UNC5CLQ8IV45 518 aa8.57□□□□□ -1.04
FN1-213ENST00000456923 CGNL1Q0VF96 1302 aa8.57□□□□□ -1.04
FN1-213ENST00000456923 PIP4K2BP78356 416 aa8.57□□□□□ -1.04
FN1-213ENST00000456923 CBX1P83916 185 aa8.56□□□□□ -1.04
FN1-213ENST00000456923 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
FN1-213ENST00000456923 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
FN1-213ENST00000456923 ITGB4P16144 1822 aa8.56□□□□□ -1.04
FN1-213ENST00000456923 TAF1LQ8IZX4 1826 aa8.56□□□□□ -1.04
FN1-213ENST00000456923 TRPC5Q9UL62 973 aaPredicted RBP8.56□□□□□ -1.04
FN1-213ENST00000456923 DOT1LQ8TEK3 1739 aa8.56□□□□□ -1.04
FN1-213ENST00000456923 HDGFL2Q7Z4V5 671 aaPredicted RBP8.56□□□□□ -1.04
FN1-213ENST00000456923 RBM6P78332 1123 aaKnown RBP8.55□□□□□ -1.04
FN1-213ENST00000456923 CABP1Q9NZU7 370 aa8.55□□□□□ -1.04
FN1-213ENST00000456923 TNNT3P45378 269 aaPredicted RBP8.55□□□□□ -1.04
FN1-213ENST00000456923 AFF2P51816 1311 aa8.55□□□□□ -1.04
FN1-213ENST00000456923 SPATA31A1Q5TZJ5 1347 aa8.55□□□□□ -1.04
FN1-213ENST00000456923 CABP2Q9NPB3 220 aa8.55□□□□□ -1.04
FN1-213ENST00000456923 R3HCC1Q9Y3T6 440 aaKnown RBP8.55□□□□□ -1.04
FN1-213ENST00000456923 NSD3Q9BZ95 1437 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 KCNJ4P48050 445 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 CCDC125Q86Z20 511 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 PANK2Q9BZ23 570 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 KDRP35968 1356 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
FN1-213ENST00000456923 FOXO3O43524 673 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 ZNF771Q7L3S4 317 aaPredicted RBP8.54□□□□□ -1.04
FN1-213ENST00000456923 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 RBM33Q96EV2 1170 aaKnown RBP8.54□□□□□ -1.04
FN1-213ENST00000456923 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.54□□□□□ -1.04
FN1-213ENST00000456923 BTAF1O14981 1849 aa8.54□□□□□ -1.04
FN1-213ENST00000456923 HSPA5P11021 654 aaKnown RBP8.54□□□□□ -1.04
FN1-213ENST00000456923 PRR29P0C7W0 189 aa8.53□□□□□ -1.04
FN1-213ENST00000456923 KIAA0232Q92628 1395 aa8.53□□□□□ -1.04
FN1-213ENST00000456923 WDR17Q8IZU2 1322 aa8.53□□□□□ -1.04
FN1-213ENST00000456923 RNF216Q9NWF9 866 aaPredicted RBP8.53□□□□□ -1.04
FN1-213ENST00000456923 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
FN1-213ENST00000456923 FLT4P35916 1363 aa8.53□□□□□ -1.04
FN1-213ENST00000456923 KIF7Q2M1P5 1343 aa8.52□□□□□ -1.04
FN1-213ENST00000456923 ANP32CO43423 234 aa8.52□□□□□ -1.05
FN1-213ENST00000456923 SRPK2P78362 688 aaKnown RBP8.52□□□□□ -1.05
FN1-213ENST00000456923 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.05
FN1-213ENST00000456923 TUBGCP6Q96RT7 1819 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms