RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 HAP1P54257 671 aaPredicted RBP23.09■■□□□ 1.29
SEMA3B-209ENST00000456560 PIK3C2AO00443 1686 aa23.09■■□□□ 1.29
SEMA3B-209ENST00000456560 ANKARQ7Z5J8 1434 aa23.09■■□□□ 1.29
SEMA3B-209ENST00000456560 C22orf23Q9BZE7 217 aa23.09■■□□□ 1.29
SEMA3B-209ENST00000456560 SOX12O15370 315 aa23.08■■□□□ 1.29
SEMA3B-209ENST00000456560 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
SEMA3B-209ENST00000456560 KDRP35968 1356 aa23.08■■□□□ 1.28
SEMA3B-209ENST00000456560 KRT24Q2M2I5 525 aa23.08■■□□□ 1.28
SEMA3B-209ENST00000456560 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.28
SEMA3B-209ENST00000456560 RGS12O14924 1447 aa23.07■■□□□ 1.28
SEMA3B-209ENST00000456560 FRAT2O75474 233 aaPredicted RBP23.06■■□□□ 1.28
SEMA3B-209ENST00000456560 MFAP1P55081 439 aaKnown RBP23.06■■□□□ 1.28
SEMA3B-209ENST00000456560 ANKRD45Q5TZF3 282 aa23.06■■□□□ 1.28
SEMA3B-209ENST00000456560 ANTXR1Q9H6X2 564 aa23.05■■□□□ 1.28
SEMA3B-209ENST00000456560 IGSF1Q8N6C5 1336 aa23.05■■□□□ 1.28
SEMA3B-209ENST00000456560 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
SEMA3B-209ENST00000456560 BMP2KLQ5H9B9 411 aa23.05■■□□□ 1.28
SEMA3B-209ENST00000456560 BRPF3Q9ULD4 1205 aa23.05■■□□□ 1.28
SEMA3B-209ENST00000456560 KCNA6P17658 529 aa23.04■■□□□ 1.28
SEMA3B-209ENST00000456560 NPHP4O75161 1426 aaPredicted RBP23.03■■□□□ 1.28
SEMA3B-209ENST00000456560 EYA1Q99502 592 aa23.03■■□□□ 1.28
SEMA3B-209ENST00000456560 FOXO3O43524 673 aa23.02■■□□□ 1.28
SEMA3B-209ENST00000456560 AMPHP49418 695 aa23.02■■□□□ 1.28
SEMA3B-209ENST00000456560 USP54Q70EL1 1684 aa23.02■■□□□ 1.28
SEMA3B-209ENST00000456560 MARF1Q9Y4F3 1742 aaKnown RBP23.02■■□□□ 1.28
SEMA3B-209ENST00000456560 PTPRCP08575 1304 aa23■■□□□ 1.27
SEMA3B-209ENST00000456560 LMTK3Q96Q04 1460 aa23■■□□□ 1.27
SEMA3B-209ENST00000456560 NLRP6P59044 892 aa23■■□□□ 1.27
SEMA3B-209ENST00000456560 RBM33Q96EV2 1170 aaKnown RBP23■■□□□ 1.27
SEMA3B-209ENST00000456560 SLKQ9H2G2 1235 aaPredicted RBP23■■□□□ 1.27
SEMA3B-209ENST00000456560 RBM25P49756 843 aaKnown RBP22.99■■□□□ 1.27
SEMA3B-209ENST00000456560 DCTPP1Q9H773 170 aa22.99■■□□□ 1.27
SEMA3B-209ENST00000456560 GAS2L2Q8NHY3 880 aa22.98■■□□□ 1.27
SEMA3B-209ENST00000456560 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
SEMA3B-209ENST00000456560 ATP10DQ9P241 1426 aa22.97■■□□□ 1.27
SEMA3B-209ENST00000456560 MIS18AQ9NYP9 233 aa22.97■■□□□ 1.27
SEMA3B-209ENST00000456560 HTATSF1O43719 755 aaKnown RBP22.97■■□□□ 1.27
SEMA3B-209ENST00000456560 ANKRD44Q8N8A2 993 aa22.97■■□□□ 1.27
SEMA3B-209ENST00000456560 NWD1Q149M9 1564 aa22.96■■□□□ 1.27
SEMA3B-209ENST00000456560 HOXC9P31274 260 aa22.96■■□□□ 1.27
SEMA3B-209ENST00000456560 RPAP2Q8IXW5 612 aaPredicted RBP22.95■■□□□ 1.26
SEMA3B-209ENST00000456560 TSPYL4Q9UJ04 414 aa22.95■■□□□ 1.26
SEMA3B-209ENST00000456560 SLC4A2P04920 1241 aa22.94■■□□□ 1.26
SEMA3B-209ENST00000456560 LRRC37A3O60309 1634 aa22.94■■□□□ 1.26
SEMA3B-209ENST00000456560 RTL1A6NKG5 1358 aa22.93■■□□□ 1.26
SEMA3B-209ENST00000456560 MSH6P52701 1360 aa22.93■■□□□ 1.26
SEMA3B-209ENST00000456560 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
SEMA3B-209ENST00000456560 NUTM2GQ5VZR2 741 aa22.92■■□□□ 1.26
SEMA3B-209ENST00000456560 CEP85Q6P2H3 762 aa22.92■■□□□ 1.26
SEMA3B-209ENST00000456560 PLEKHM2Q8IWE5 1019 aa22.92■■□□□ 1.26
SEMA3B-209ENST00000456560 ABTB2Q8N961 1025 aa22.91■■□□□ 1.26
SEMA3B-209ENST00000456560 TBC1D9Q6ZT07 1266 aa22.9■■□□□ 1.26
SEMA3B-209ENST00000456560 G2E3Q7L622 706 aa22.9■■□□□ 1.26
SEMA3B-209ENST00000456560 SNX21Q969T3 373 aa22.9■■□□□ 1.26
SEMA3B-209ENST00000456560 MEIS3Q99687 375 aa22.89■■□□□ 1.26
SEMA3B-209ENST00000456560 GNAT3A8MTJ3 354 aa22.89■■□□□ 1.25
SEMA3B-209ENST00000456560 PHF8Q9UPP1 1060 aa22.88■■□□□ 1.25
SEMA3B-209ENST00000456560 GSPT1P15170 499 aaKnown RBP22.87■■□□□ 1.25
SEMA3B-209ENST00000456560 CDC45O75419 566 aa22.86■■□□□ 1.25
SEMA3B-209ENST00000456560 HSCBQ8IWL3 235 aa22.86■■□□□ 1.25
SEMA3B-209ENST00000456560 KIF2CQ99661 725 aa22.86■■□□□ 1.25
SEMA3B-209ENST00000456560 NCOA3Q9Y6Q9 1424 aa22.86■■□□□ 1.25
SEMA3B-209ENST00000456560 MAP3K5Q99683 1374 aa22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 CCT4P50991 539 aaKnown RBP22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 SPRYD3Q8NCJ5 442 aa22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 IL17REQ8NFR9 667 aa22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 TTC22Q5TAA0 569 aa22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 BABAM1Q9NWV8 329 aa22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 CHMP5Q9NZZ3 219 aa22.85■■□□□ 1.25
SEMA3B-209ENST00000456560 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
SEMA3B-209ENST00000456560 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
SEMA3B-209ENST00000456560 STRCQ7RTU9 1775 aa22.83■■□□□ 1.25
SEMA3B-209ENST00000456560 F6X3S4 739 aa22.83■■□□□ 1.25
SEMA3B-209ENST00000456560 FAM208AQ9UK61 1670 aaKnown RBP22.83■■□□□ 1.24
SEMA3B-209ENST00000456560 LTN1O94822 1766 aa22.82■■□□□ 1.24
SEMA3B-209ENST00000456560 NFAT5O94916 1531 aa22.82■■□□□ 1.24
SEMA3B-209ENST00000456560 LTV1Q96GA3 475 aaPredicted RBP22.82■■□□□ 1.24
SEMA3B-209ENST00000456560 STK31Q9BXU1 1019 aa22.82■■□□□ 1.24
SEMA3B-209ENST00000456560 DDIT3P35638 169 aa22.81■■□□□ 1.24
SEMA3B-209ENST00000456560 CCDC30Q5VVM6 783 aa22.81■■□□□ 1.24
SEMA3B-209ENST00000456560 IP6K1Q92551 441 aa22.81■■□□□ 1.24
SEMA3B-209ENST00000456560 TAF7Q15545 349 aaPredicted RBP22.81■■□□□ 1.24
SEMA3B-209ENST00000456560 SLC4A10Q6U841 1118 aa22.8■■□□□ 1.24
SEMA3B-209ENST00000456560 OTUD7AQ8TE49 926 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-209ENST00000456560 ADGRL3Q9HAR2 1447 aa22.8■■□□□ 1.24
SEMA3B-209ENST00000456560 EIF5BO60841 1220 aaKnown RBP22.79■■□□□ 1.24
SEMA3B-209ENST00000456560 HMMRO75330 724 aa22.79■■□□□ 1.24
SEMA3B-209ENST00000456560 PRKCSHP14314 528 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-209ENST00000456560 FLIIQ13045 1269 aa22.79■■□□□ 1.24
SEMA3B-209ENST00000456560 C14orf37Q86TY3 774 aa22.79■■□□□ 1.24
SEMA3B-209ENST00000456560 CACNA1FO60840 1977 aa22.78■■□□□ 1.24
SEMA3B-209ENST00000456560 SMARCA5O60264 1052 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-209ENST00000456560 PROSER2Q86WR7 435 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-209ENST00000456560 USHBP1Q8N6Y0 703 aa22.77■■□□□ 1.24
SEMA3B-209ENST00000456560 MCM4P33991 863 aa22.77■■□□□ 1.24
SEMA3B-209ENST00000456560 GNAI2P04899 355 aa22.76■■□□□ 1.23
SEMA3B-209ENST00000456560 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
SEMA3B-209ENST00000456560 STRCP1A6NGW2 1772 aa22.75■■□□□ 1.23
SEMA3B-209ENST00000456560 PHRF1Q9P1Y6 1649 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms