RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 ANP32BQ92688 251 aaKnown RBP15.91■□□□□ 0.14
LINC00473-202ENST00000455853 AATKQ6ZMQ8 1374 aa15.91■□□□□ 0.14
LINC00473-202ENST00000455853 CPSF1Q10570 1443 aaKnown RBP15.91■□□□□ 0.14
LINC00473-202ENST00000455853 CDK19Q9BWU1 502 aa15.91■□□□□ 0.14
LINC00473-202ENST00000455853 STK26Q9P289 416 aa15.91■□□□□ 0.14
LINC00473-202ENST00000455853 SAFB2Q14151 953 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC00473-202ENST00000455853 KLHL40Q2TBA0 621 aa15.9■□□□□ 0.14
LINC00473-202ENST00000455853 ARXQ96QS3 562 aa15.9■□□□□ 0.14
LINC00473-202ENST00000455853 XIRP1Q702N8 1843 aaKnown RBP15.9■□□□□ 0.14
LINC00473-202ENST00000455853 EDC4Q6P2E9 1401 aaKnown RBP15.9■□□□□ 0.14
LINC00473-202ENST00000455853 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
LINC00473-202ENST00000455853 RRP9O43818 475 aaKnown RBP15.89■□□□□ 0.13
LINC00473-202ENST00000455853 POLKQ9UBT6 870 aa15.89■□□□□ 0.13
LINC00473-202ENST00000455853 PPP1R9BQ96SB3 815 aa15.89■□□□□ 0.13
LINC00473-202ENST00000455853 CWC22Q9HCG8 908 aaKnown RBP15.89■□□□□ 0.13
LINC00473-202ENST00000455853 AMOTL2Q9Y2J4 779 aa15.89■□□□□ 0.13
LINC00473-202ENST00000455853 TPM2P07951 284 aa15.88■□□□□ 0.13
LINC00473-202ENST00000455853 DIP2AQ14689 1571 aa15.88■□□□□ 0.13
LINC00473-202ENST00000455853 NRXN3Q9Y4C0 1643 aa15.87■□□□□ 0.13
LINC00473-202ENST00000455853 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
LINC00473-202ENST00000455853 TWISTNBQ3B726 338 aaPredicted RBP15.87■□□□□ 0.13
LINC00473-202ENST00000455853 INTS3Q68E01 1043 aaKnown RBP15.87■□□□□ 0.13
LINC00473-202ENST00000455853 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
LINC00473-202ENST00000455853 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
LINC00473-202ENST00000455853 METP08581 1390 aa15.87■□□□□ 0.13
LINC00473-202ENST00000455853 SETD1AO15047 1707 aaKnown RBP15.86■□□□□ 0.13
LINC00473-202ENST00000455853 MON2Q7Z3U7 1717 aa15.86■□□□□ 0.13
LINC00473-202ENST00000455853 CHD2O14647 1828 aaKnown RBP15.86■□□□□ 0.13
LINC00473-202ENST00000455853 HS1BP3Q53T59 392 aa15.86■□□□□ 0.13
LINC00473-202ENST00000455853 KNDC1Q76NI1 1749 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 ZNF445P59923 1031 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 TTC22Q5TAA0 569 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 SIRT2Q8IXJ6 389 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 RPAP2Q8IXW5 612 aaPredicted RBP15.85■□□□□ 0.13
LINC00473-202ENST00000455853 MBIPQ9NS73 344 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 NRKQ7Z2Y5 1582 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 MSH6P52701 1360 aa15.85■□□□□ 0.13
LINC00473-202ENST00000455853 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
LINC00473-202ENST00000455853 IL13P35225 146 aa15.84■□□□□ 0.13
LINC00473-202ENST00000455853 GAS2L3Q86XJ1 694 aa15.84■□□□□ 0.13
LINC00473-202ENST00000455853 PLEKHM2Q8IWE5 1019 aa15.84■□□□□ 0.13
LINC00473-202ENST00000455853 GAS2L2Q8NHY3 880 aa15.84■□□□□ 0.13
LINC00473-202ENST00000455853 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
LINC00473-202ENST00000455853 ITSN1Q15811 1721 aa15.83■□□□□ 0.13
LINC00473-202ENST00000455853 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.12
LINC00473-202ENST00000455853 C14orf37Q86TY3 774 aa15.83■□□□□ 0.12
LINC00473-202ENST00000455853 ANKRD44Q8N8A2 993 aa15.83■□□□□ 0.12
LINC00473-202ENST00000455853 DDX49Q9Y6V7 483 aaKnown RBP15.83■□□□□ 0.12
LINC00473-202ENST00000455853 ST18O60284 1047 aa15.82■□□□□ 0.12
LINC00473-202ENST00000455853 SSFA2P28290 1259 aa15.82■□□□□ 0.12
LINC00473-202ENST00000455853 TERF1P54274 439 aa15.82■□□□□ 0.12
LINC00473-202ENST00000455853 CD2BP2O95400 341 aaKnown RBP15.82■□□□□ 0.12
LINC00473-202ENST00000455853 CYP2E1P05181 493 aaPredicted RBP15.82■□□□□ 0.12
LINC00473-202ENST00000455853 ZSCAN30Q86W11 494 aa15.82■□□□□ 0.12
LINC00473-202ENST00000455853 KIAA0232Q92628 1395 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 REC8O95072 547 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 TSPYL6Q8N831 410 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 PHACTR3Q96KR7 559 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 USP26Q9BXU7 913 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 PTPRCP08575 1304 aa15.81■□□□□ 0.12
LINC00473-202ENST00000455853 GSPT1P15170 499 aaKnown RBP15.8■□□□□ 0.12
LINC00473-202ENST00000455853 HSP90AA2PQ14568 343 aaPredicted RBP15.8■□□□□ 0.12
LINC00473-202ENST00000455853 SLAIN2Q9P270 581 aa15.8■□□□□ 0.12
LINC00473-202ENST00000455853 ERBB4Q15303 1308 aa15.79■□□□□ 0.12
LINC00473-202ENST00000455853 ATP10DQ9P241 1426 aa15.79■□□□□ 0.12
LINC00473-202ENST00000455853 C19orf44Q9H6X5 657 aa15.79■□□□□ 0.12
LINC00473-202ENST00000455853 AK9Q5TCS8 1911 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 HMOX1P09601 288 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
LINC00473-202ENST00000455853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.78■□□□□ 0.12
LINC00473-202ENST00000455853 XRN1Q8IZH2 1706 aaKnown RBP15.78■□□□□ 0.12
LINC00473-202ENST00000455853 HMMRO75330 724 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 MCM2P49736 904 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 C8orf58Q8NAV2 365 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 COG3Q96JB2 828 aa15.78■□□□□ 0.12
LINC00473-202ENST00000455853 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
LINC00473-202ENST00000455853 MSNP26038 577 aaKnown RBP15.77■□□□□ 0.11
LINC00473-202ENST00000455853 ATF3P18847 181 aa15.76■□□□□ 0.11
LINC00473-202ENST00000455853 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
LINC00473-202ENST00000455853 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 CADPS2Q86UW7 1296 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
LINC00473-202ENST00000455853 LMBRD1Q9NUN5 540 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 EMILIN1Q9Y6C2 1016 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
LINC00473-202ENST00000455853 OFD1O75665 1012 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 MCM5P33992 734 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 MCTP1Q6DN14 999 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 OSBPL3Q9H4L5 887 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 ROBO1Q9Y6N7 1651 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 RGS12O14924 1447 aa15.75■□□□□ 0.11
LINC00473-202ENST00000455853 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
LINC00473-202ENST00000455853 ROBO2Q9HCK4 1378 aa15.74■□□□□ 0.11
LINC00473-202ENST00000455853 ERC2O15083 957 aa15.74■□□□□ 0.11
LINC00473-202ENST00000455853 MBD3O95983 291 aa15.73■□□□□ 0.11
LINC00473-202ENST00000455853 ZSCAN23Q3MJ62 389 aa15.73■□□□□ 0.11
LINC00473-202ENST00000455853 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms