RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
GTF3C2-206ENST00000454704 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 BECN1Q14457 450 aa13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
GTF3C2-206ENST00000454704 MON2Q7Z3U7 1717 aa13.46□□□□□ -0.25
GTF3C2-206ENST00000454704 ACEP12821 1306 aa13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 TRIM37O94972 964 aa13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 MVPQ14764 893 aaKnown RBP13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 CHMP4BQ9H444 224 aaKnown RBP13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 UPF2Q9HAU5 1272 aaKnown RBP13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 COG6Q9Y2V7 657 aa13.46□□□□□ -0.26
GTF3C2-206ENST00000454704 MAP2P11137 1827 aaKnown RBP13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 KIF16BQ96L93 1317 aa13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 IGHDP01880 384 aa13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 RGS3P49796 1198 aa13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 FAM196AQ6ZSG2 479 aa13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
GTF3C2-206ENST00000454704 LMO7Q8WWI1 1683 aa13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 TMPOP42166 694 aaKnown RBP13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 CALD1Q05682 793 aaKnown RBP13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
GTF3C2-206ENST00000454704 BRPF1P55201 1214 aaPredicted RBP13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 EVA1CP58658 441 aa13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 LARP1Q6PKG0 1096 aaKnown RBP13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 DZIP1LQ8IYY4 767 aaKnown RBP13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
GTF3C2-206ENST00000454704 RREB1Q92766 1687 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 USP19O94966 1318 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 PLEKHG3A1L390 1219 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 IPO8O15397 1037 aaKnown RBP13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 DIAPH1O60610 1272 aaKnown RBP13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 FCHSD2O94868 740 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 HDAC1Q13547 482 aaPredicted RBP13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 FRAT1Q92837 279 aaPredicted RBP13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 CPDO75976 1380 aa13.42□□□□□ -0.26
GTF3C2-206ENST00000454704 FYB1O15117 783 aa13.41□□□□□ -0.26
GTF3C2-206ENST00000454704 APBA3O96018 575 aa13.41□□□□□ -0.26
GTF3C2-206ENST00000454704 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
GTF3C2-206ENST00000454704 FTSJ3Q8IY81 847 aaKnown RBP13.41□□□□□ -0.26
GTF3C2-206ENST00000454704 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
GTF3C2-206ENST00000454704 AATKQ6ZMQ8 1374 aa13.41□□□□□ -0.26
GTF3C2-206ENST00000454704 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
GTF3C2-206ENST00000454704 COL5A2P05997 1499 aaPredicted RBP13.4□□□□□ -0.27
GTF3C2-206ENST00000454704 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
GTF3C2-206ENST00000454704 EIF5BO60841 1220 aaKnown RBP13.39□□□□□ -0.27
GTF3C2-206ENST00000454704 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
GTF3C2-206ENST00000454704 NFKBIBQ15653 356 aa13.39□□□□□ -0.27
GTF3C2-206ENST00000454704 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
GTF3C2-206ENST00000454704 GCP02774 474 aa13.38□□□□□ -0.27
GTF3C2-206ENST00000454704 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
GTF3C2-206ENST00000454704 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
GTF3C2-206ENST00000454704 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
GTF3C2-206ENST00000454704 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 ZBTB7CA1YPR0 619 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 LMOD3Q0VAK6 560 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 LRRC37A3O60309 1634 aa13.37□□□□□ -0.27
GTF3C2-206ENST00000454704 USP6P35125 1406 aa13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 RLBP1P12271 317 aa13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 EXOSC9Q06265 439 aaKnown RBP13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 GSE1Q14687 1217 aa13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 PIK3C2AO00443 1686 aa13.36□□□□□ -0.27
GTF3C2-206ENST00000454704 CRB1P82279 1406 aa13.35□□□□□ -0.27
GTF3C2-206ENST00000454704 SLIT3O75094 1523 aa13.35□□□□□ -0.27
GTF3C2-206ENST00000454704 PEAK1Q9H792 1746 aa13.35□□□□□ -0.27
GTF3C2-206ENST00000454704 RIPK4P57078 832 aa13.35□□□□□ -0.27
GTF3C2-206ENST00000454704 SMC5Q8IY18 1101 aa13.35□□□□□ -0.27
GTF3C2-206ENST00000454704 TBC1D32Q96NH3 1257 aa13.35□□□□□ -0.27
GTF3C2-206ENST00000454704 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
GTF3C2-206ENST00000454704 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
GTF3C2-206ENST00000454704 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
GTF3C2-206ENST00000454704 OVOS2A0A0G2JMS6 1433 aa13.34□□□□□ -0.27
GTF3C2-206ENST00000454704 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
GTF3C2-206ENST00000454704 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
GTF3C2-206ENST00000454704 TRIM27P14373 513 aa13.33□□□□□ -0.28
GTF3C2-206ENST00000454704 NLRP6P59044 892 aa13.33□□□□□ -0.28
GTF3C2-206ENST00000454704 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
GTF3C2-206ENST00000454704 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms