RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 DNAAF4Q8WXU2 420 aa12.08□□□□□ -0.48
CSGALNACT1-203ENST00000454498 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 RAD21O60216 631 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 KAT6BQ8WYB5 2073 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 SMARCA5O60264 1052 aaPredicted RBP12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 STARD3NLO95772 234 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 COL17A1Q9UMD9 1497 aaPredicted RBP12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 A0A1W2PP64 1363 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 CHRNA2Q15822 529 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 MBD5Q9P267 1494 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 YTHDC2Q9H6S0 1430 aaKnown RBP12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 KCNA6P17658 529 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PTPRCP08575 1304 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 DHX16O60231 1041 aaKnown RBP12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 TMOD3Q9NYL9 352 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 TBX22Q9Y458 520 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 LRRFIP2Q9Y608 721 aaKnown RBP12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PIK3C2GO75747 1445 aa12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
CSGALNACT1-203ENST00000454498 NPATQ14207 1427 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 K7ELQ4 463 aaPredicted RBP12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 MX1P20591 662 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PDCP20941 246 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 SAFBQ15424 915 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 TRAK2O60296 914 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 MAST1Q9Y2H9 1570 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ADAMTS2O95450 1211 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 TRIM34Q9BYJ4 488 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
CSGALNACT1-203ENST00000454498 IGHDP01880 384 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 CCDC73Q6ZRK6 1079 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PKNOX2Q96KN3 472 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 MYD88Q99836 296 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ANXA1P04083 346 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 HYPKQ9NX55 129 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ATP10AO60312 1499 aa12.04□□□□□ -0.48
CSGALNACT1-203ENST00000454498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ABCA8O94911 1581 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 SART3Q15020 963 aaKnown RBP12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 C8orf58Q8NAV2 365 aa12.03□□□□□ -0.48
CSGALNACT1-203ENST00000454498 PES1O00541 588 aaKnown RBP12.02□□□□□ -0.48
CSGALNACT1-203ENST00000454498 TPD52L1Q16890 204 aaPredicted RBP12.02□□□□□ -0.48
CSGALNACT1-203ENST00000454498 GNL3LQ9NVN8 582 aaKnown RBP12.02□□□□□ -0.48
CSGALNACT1-203ENST00000454498 NPHP3Q7Z494 1330 aa12.02□□□□□ -0.48
CSGALNACT1-203ENST00000454498 BLOC1S2Q6QNY1 142 aa12.02□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ABCC1P33527 1531 aa12.02□□□□□ -0.49
CSGALNACT1-203ENST00000454498 RRP12Q5JTH9 1297 aaKnown RBP12.02□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CWC22Q9HCG8 908 aaKnown RBP12.02□□□□□ -0.49
CSGALNACT1-203ENST00000454498 NPC1L1Q9UHC9 1359 aa12.02□□□□□ -0.49
CSGALNACT1-203ENST00000454498 PRPF40AO75400 957 aaKnown RBP12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 FLT4P35916 1363 aa12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 A0A087WZG4 1122 aa12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 FIBPO43427 364 aa12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MBD3O95983 291 aa12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 CAVIN1Q6NZI2 390 aaKnown RBP12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 VSIG10Q8N0Z9 540 aa12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 C19orf44Q9H6X5 657 aa12.01□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MSH6P52701 1360 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MAP3K19Q56UN5 1328 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 UPF3BQ9BZI7 483 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 SASS6Q6UVJ0 657 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 JAKMIP1Q96N16 626 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 BOLA2Q9H3K6 86 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ARHGEF5Q12774 1597 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 NEO1Q92859 1461 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MTHFSDQ2M296 383 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MEIS3Q99687 375 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MTMR7Q9Y216 660 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 EXOC5O00471 708 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ANKRD1Q15327 319 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 RNF214Q8ND24 703 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 EYA1Q99502 592 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 SDF4Q9BRK5 362 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 SPINK5Q9NQ38 1064 aaPredicted RBP12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
CSGALNACT1-203ENST00000454498 PIK3R4Q99570 1358 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 STK3Q13188 491 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
CSGALNACT1-203ENST00000454498 HSPA2P54652 639 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms