RNA–Protein interactions for RNA: ENST00000453213.1

LINC00963-206, long intergenic non-protein coding RNA 963, humanhuman

TSL 3

Gene LINC00963, Length 469 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-206ENST00000453213 ANKRD24Q8TF21 1146 aa12.37□□□□□ -0.43
LINC00963-206ENST00000453213 ANKRD36BQ8N2N9 1353 aa12.37□□□□□ -0.43
LINC00963-206ENST00000453213 HTRA3P83110 453 aa12.36□□□□□ -0.43
LINC00963-206ENST00000453213 C16orf71Q8IYS4 520 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-206ENST00000453213 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
LINC00963-206ENST00000453213 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
LINC00963-206ENST00000453213 USP47Q96K76 1375 aa12.34□□□□□ -0.43
LINC00963-206ENST00000453213 SLC34A2O95436 690 aa12.34□□□□□ -0.43
LINC00963-206ENST00000453213 NBPF1Q3BBV0 1214 aa12.34□□□□□ -0.43
LINC00963-206ENST00000453213 NMRK2Q9NPI5 230 aa12.34□□□□□ -0.43
LINC00963-206ENST00000453213 EVC2Q86UK5 1308 aa12.34□□□□□ -0.43
LINC00963-206ENST00000453213 NSD2O96028 1365 aa12.33□□□□□ -0.44
LINC00963-206ENST00000453213 FSTL1Q12841 308 aa12.33□□□□□ -0.44
LINC00963-206ENST00000453213 WDR90Q96KV7 1748 aa12.33□□□□□ -0.44
LINC00963-206ENST00000453213 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
LINC00963-206ENST00000453213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC00963-206ENST00000453213 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
LINC00963-206ENST00000453213 LY75O60449 1722 aa12.31□□□□□ -0.44
LINC00963-206ENST00000453213 CICQ96RK0 1608 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-206ENST00000453213 KIAA1210Q9ULL0 1709 aa12.29□□□□□ -0.44
LINC00963-206ENST00000453213 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
LINC00963-206ENST00000453213 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
LINC00963-206ENST00000453213 AK7Q96M32 723 aa12.29□□□□□ -0.44
LINC00963-206ENST00000453213 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
LINC00963-206ENST00000453213 DOT1LQ8TEK3 1739 aa12.28□□□□□ -0.44
LINC00963-206ENST00000453213 PHF14O94880 888 aa12.28□□□□□ -0.44
LINC00963-206ENST00000453213 LTV1Q96GA3 475 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-206ENST00000453213 RAB3GAP2Q9H2M9 1393 aa12.28□□□□□ -0.44
LINC00963-206ENST00000453213 HSPA1AP0DMV8 641 aaKnown RBP12.27□□□□□ -0.45
LINC00963-206ENST00000453213 HSPA1BP0DMV9 641 aaKnown RBP12.27□□□□□ -0.45
LINC00963-206ENST00000453213 NME9Q86XW9 330 aa12.27□□□□□ -0.45
LINC00963-206ENST00000453213 BCS1LQ9Y276 419 aa12.27□□□□□ -0.45
LINC00963-206ENST00000453213 KDM2BQ8NHM5 1336 aa12.26□□□□□ -0.45
LINC00963-206ENST00000453213 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
LINC00963-206ENST00000453213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.25□□□□□ -0.45
LINC00963-206ENST00000453213 IP6K1Q92551 441 aa12.25□□□□□ -0.45
LINC00963-206ENST00000453213 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
LINC00963-206ENST00000453213 PLEKHG2Q9H7P9 1386 aa12.25□□□□□ -0.45
LINC00963-206ENST00000453213 C5P01031 1676 aa12.25□□□□□ -0.45
LINC00963-206ENST00000453213 TGFB2P61812 414 aa12.24□□□□□ -0.45
LINC00963-206ENST00000453213 C9orf131Q5VYM1 1079 aa12.24□□□□□ -0.45
LINC00963-206ENST00000453213 SMC1BQ8NDV3 1235 aa12.24□□□□□ -0.45
LINC00963-206ENST00000453213 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 A0A0G2JLW4 131 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 SSFA2P28290 1259 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 SMIM5Q71RC9 77 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 AMIGO3Q86WK7 504 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 LTN1O94822 1766 aa12.23□□□□□ -0.45
LINC00963-206ENST00000453213 FCHSD2O94868 740 aa12.22□□□□□ -0.45
LINC00963-206ENST00000453213 MMP10P09238 476 aa12.22□□□□□ -0.45
LINC00963-206ENST00000453213 SMARCC1Q92922 1105 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-206ENST00000453213 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
LINC00963-206ENST00000453213 USP54Q70EL1 1684 aa12.22□□□□□ -0.45
LINC00963-206ENST00000453213 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
LINC00963-206ENST00000453213 MEGF6O75095 1541 aa12.21□□□□□ -0.46
LINC00963-206ENST00000453213 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.46
LINC00963-206ENST00000453213 C10orf71Q711Q0 1435 aa12.2□□□□□ -0.46
LINC00963-206ENST00000453213 C4BP0C0L5 1744 aa12.2□□□□□ -0.46
LINC00963-206ENST00000453213 SBNO2Q9Y2G9 1366 aa12.2□□□□□ -0.46
LINC00963-206ENST00000453213 FAM208AQ9UK61 1670 aaKnown RBP12.2□□□□□ -0.46
LINC00963-206ENST00000453213 HDGFL2Q7Z4V5 671 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-206ENST00000453213 PCNTO95613 3336 aa12.2□□□□□ -0.46
LINC00963-206ENST00000453213 CGNL1Q0VF96 1302 aa12.19□□□□□ -0.46
LINC00963-206ENST00000453213 AMPHP49418 695 aa12.19□□□□□ -0.46
LINC00963-206ENST00000453213 RAPGEF4Q8WZA2 1011 aa12.19□□□□□ -0.46
LINC00963-206ENST00000453213 RNF181Q9P0P0 153 aa12.19□□□□□ -0.46
LINC00963-206ENST00000453213 MON2Q7Z3U7 1717 aa12.18□□□□□ -0.46
LINC00963-206ENST00000453213 GNPATO15228 680 aa12.18□□□□□ -0.46
LINC00963-206ENST00000453213 DPEP1P16444 411 aa12.18□□□□□ -0.46
LINC00963-206ENST00000453213 HOXC9P31274 260 aa12.18□□□□□ -0.46
LINC00963-206ENST00000453213 TMC1Q8TDI8 760 aa12.18□□□□□ -0.46
LINC00963-206ENST00000453213 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
LINC00963-206ENST00000453213 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
LINC00963-206ENST00000453213 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
LINC00963-206ENST00000453213 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
LINC00963-206ENST00000453213 EDC4Q6P2E9 1401 aaKnown RBP12.17□□□□□ -0.46
LINC00963-206ENST00000453213 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
LINC00963-206ENST00000453213 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
LINC00963-206ENST00000453213 NLGN1Q8N2Q7 840 aa12.16□□□□□ -0.46
LINC00963-206ENST00000453213 LINC00116Q8NCU8 138 aa12.16□□□□□ -0.46
LINC00963-206ENST00000453213 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
LINC00963-206ENST00000453213 LOC102724428A0A0B4J2F2 783 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 SIK1P57059 783 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 TMF1P82094 1093 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 NBPF6Q5VWK0 638 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 NBPF4Q96M43 638 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 TERF2IPQ9NYB0 399 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 PIM2Q9P1W9 311 aa12.15□□□□□ -0.46
LINC00963-206ENST00000453213 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
LINC00963-206ENST00000453213 DALRD3Q5D0E6 543 aaKnown RBP12.14□□□□□ -0.47
LINC00963-206ENST00000453213 PIGBQ92521 554 aa12.14□□□□□ -0.47
LINC00963-206ENST00000453213 UBR3Q6ZT12 1888 aa12.14□□□□□ -0.47
LINC00963-206ENST00000453213 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
LINC00963-206ENST00000453213 N4BP2Q86UW6 1770 aaPredicted RBP12.13□□□□□ -0.47
LINC00963-206ENST00000453213 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
LINC00963-206ENST00000453213 COG3Q96JB2 828 aa12.13□□□□□ -0.47
LINC00963-206ENST00000453213 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
LINC00963-206ENST00000453213 SLC12A5Q9H2X9 1139 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms