RNA–Protein interactions for RNA: ENST00000451579.1

LINC02248-202, Transcript of long intergenic non-protein coding RNA 2248, humanhuman

TSL 3 BASIC

Gene LINC02248, Length 606 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02248-202ENST00000451579 ABCC6O95255 1503 aa13.74□□□□□ -0.21
LINC02248-202ENST00000451579 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
LINC02248-202ENST00000451579 IP6K1Q92551 441 aa13.74□□□□□ -0.21
LINC02248-202ENST00000451579 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
LINC02248-202ENST00000451579 PPP1R1BQ9UD71 204 aaPredicted RBP13.74□□□□□ -0.21
LINC02248-202ENST00000451579 DDX54Q8TDD1 881 aaKnown RBP13.73□□□□□ -0.21
LINC02248-202ENST00000451579 COG3Q96JB2 828 aa13.73□□□□□ -0.21
LINC02248-202ENST00000451579 USP47Q96K76 1375 aa13.72□□□□□ -0.21
LINC02248-202ENST00000451579 RRS1Q15050 365 aaKnown RBP13.72□□□□□ -0.21
LINC02248-202ENST00000451579 GGNBP2Q9H3C7 697 aa13.72□□□□□ -0.21
LINC02248-202ENST00000451579 RGPD3A6NKT7 1758 aaPredicted RBP13.71□□□□□ -0.21
LINC02248-202ENST00000451579 RGPD4Q7Z3J3 1758 aa13.71□□□□□ -0.21
LINC02248-202ENST00000451579 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
LINC02248-202ENST00000451579 HOXC9P31274 260 aa13.71□□□□□ -0.21
LINC02248-202ENST00000451579 AMPHP49418 695 aa13.71□□□□□ -0.21
LINC02248-202ENST00000451579 SLC15A2Q16348 729 aa13.71□□□□□ -0.21
LINC02248-202ENST00000451579 STK32BQ9NY57 414 aa13.71□□□□□ -0.21
LINC02248-202ENST00000451579 KCNQ4P56696 695 aa13.7□□□□□ -0.22
LINC02248-202ENST00000451579 USHBP1Q8N6Y0 703 aa13.7□□□□□ -0.22
LINC02248-202ENST00000451579 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
LINC02248-202ENST00000451579 ANKRD36BQ8N2N9 1353 aa13.7□□□□□ -0.22
LINC02248-202ENST00000451579 FYB1O15117 783 aa13.69□□□□□ -0.22
LINC02248-202ENST00000451579 PTGER2P43116 358 aa13.69□□□□□ -0.22
LINC02248-202ENST00000451579 ZNF827Q17R98 1081 aa13.69□□□□□ -0.22
LINC02248-202ENST00000451579 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
LINC02248-202ENST00000451579 NINLQ9Y2I6 1382 aa13.69□□□□□ -0.22
LINC02248-202ENST00000451579 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
LINC02248-202ENST00000451579 TMF1P82094 1093 aa13.68□□□□□ -0.22
LINC02248-202ENST00000451579 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
LINC02248-202ENST00000451579 PIP4P2Q8N4L2 257 aa13.67□□□□□ -0.22
LINC02248-202ENST00000451579 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
LINC02248-202ENST00000451579 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
LINC02248-202ENST00000451579 MEGF6O75095 1541 aa13.66□□□□□ -0.22
LINC02248-202ENST00000451579 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
LINC02248-202ENST00000451579 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC02248-202ENST00000451579 CARD14Q9BXL6 1004 aa13.66□□□□□ -0.22
LINC02248-202ENST00000451579 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
LINC02248-202ENST00000451579 BTAF1O14981 1849 aa13.65□□□□□ -0.22
LINC02248-202ENST00000451579 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
LINC02248-202ENST00000451579 MYOM1P52179 1685 aa13.65□□□□□ -0.22
LINC02248-202ENST00000451579 FAM208AQ9UK61 1670 aaKnown RBP13.65□□□□□ -0.22
LINC02248-202ENST00000451579 RGPD2P0DJD1 1756 aa13.65□□□□□ -0.22
LINC02248-202ENST00000451579 KAT6BQ8WYB5 2073 aa13.65□□□□□ -0.22
LINC02248-202ENST00000451579 YY1P25490 414 aa13.64□□□□□ -0.23
LINC02248-202ENST00000451579 POTEHQ6S545 545 aa13.64□□□□□ -0.23
LINC02248-202ENST00000451579 ZCRB1Q8TBF4 217 aaKnown RBP13.64□□□□□ -0.23
LINC02248-202ENST00000451579 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
LINC02248-202ENST00000451579 SGIP1Q9BQI5 828 aa13.63□□□□□ -0.23
LINC02248-202ENST00000451579 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
LINC02248-202ENST00000451579 EMILIN1Q9Y6C2 1016 aa13.63□□□□□ -0.23
LINC02248-202ENST00000451579 NSD2O96028 1365 aa13.62□□□□□ -0.23
LINC02248-202ENST00000451579 POLR3GLQ9BT43 218 aa13.62□□□□□ -0.23
LINC02248-202ENST00000451579 MTFR1LQ9H019 292 aa13.62□□□□□ -0.23
LINC02248-202ENST00000451579 RTL1A6NKG5 1358 aa13.61□□□□□ -0.23
LINC02248-202ENST00000451579 SLC24A1O60721 1099 aa13.61□□□□□ -0.23
LINC02248-202ENST00000451579 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
LINC02248-202ENST00000451579 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
LINC02248-202ENST00000451579 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
LINC02248-202ENST00000451579 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
LINC02248-202ENST00000451579 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
LINC02248-202ENST00000451579 RAPGEF4Q8WZA2 1011 aa13.59□□□□□ -0.23
LINC02248-202ENST00000451579 ARXQ96QS3 562 aa13.59□□□□□ -0.23
LINC02248-202ENST00000451579 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
LINC02248-202ENST00000451579 TATP17735 454 aaPredicted RBP13.58□□□□□ -0.24
LINC02248-202ENST00000451579 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
LINC02248-202ENST00000451579 KLHL34Q8N239 644 aa13.58□□□□□ -0.24
LINC02248-202ENST00000451579 INSRP06213 1382 aa13.58□□□□□ -0.24
LINC02248-202ENST00000451579 FLT4P35916 1363 aa13.58□□□□□ -0.24
LINC02248-202ENST00000451579 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
LINC02248-202ENST00000451579 SLC27A3Q5K4L6 730 aa13.57□□□□□ -0.24
LINC02248-202ENST00000451579 TFCP2L1Q9NZI6 479 aa13.57□□□□□ -0.24
LINC02248-202ENST00000451579 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
LINC02248-202ENST00000451579 SMG6Q86US8 1419 aaKnown RBP13.56□□□□□ -0.24
LINC02248-202ENST00000451579 KIF20BQ96Q89 1820 aa13.56□□□□□ -0.24
LINC02248-202ENST00000451579 CYP27B1O15528 508 aa13.56□□□□□ -0.24
LINC02248-202ENST00000451579 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
LINC02248-202ENST00000451579 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
LINC02248-202ENST00000451579 MPRIPQ6WCQ1 1025 aa13.54□□□□□ -0.24
LINC02248-202ENST00000451579 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
LINC02248-202ENST00000451579 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
LINC02248-202ENST00000451579 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
LINC02248-202ENST00000451579 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
LINC02248-202ENST00000451579 FBXO3Q9UK99 471 aa13.53□□□□□ -0.24
LINC02248-202ENST00000451579 PCDH11XQ9BZA7 1347 aa13.53□□□□□ -0.24
LINC02248-202ENST00000451579 PCDH11YQ9BZA8 1340 aa13.53□□□□□ -0.24
LINC02248-202ENST00000451579 NLGN2Q8NFZ4 835 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 EYA1Q99502 592 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 POLKQ9UBT6 870 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 TUBGCP6Q96RT7 1819 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 UTRNP46939 3433 aa13.52□□□□□ -0.25
LINC02248-202ENST00000451579 LY75O60449 1722 aa13.51□□□□□ -0.25
LINC02248-202ENST00000451579 PALLDQ8WX93 1383 aa13.51□□□□□ -0.25
LINC02248-202ENST00000451579 AMIGO3Q86WK7 504 aa13.51□□□□□ -0.25
LINC02248-202ENST00000451579 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
LINC02248-202ENST00000451579 WASHC2AQ641Q2 1341 aa13.5□□□□□ -0.25
LINC02248-202ENST00000451579 POLD1P28340 1107 aa13.5□□□□□ -0.25
LINC02248-202ENST00000451579 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
LINC02248-202ENST00000451579 SLC16A10Q8TF71 515 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms