RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SALL2Q9Y467 1007 aaPredicted RBP9.77□□□□□ -0.85
TRIM4-204ENST00000447480 NPHP3Q7Z494 1330 aa9.77□□□□□ -0.85
TRIM4-204ENST00000447480 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 BLMP54132 1417 aaPredicted RBP9.76□□□□□ -0.85
TRIM4-204ENST00000447480 UBAP1LF5GYI3 381 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 FOXK1P85037 733 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 NUDT16Q96DE0 195 aaKnown RBP9.76□□□□□ -0.85
TRIM4-204ENST00000447480 TESK2Q96S53 571 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 ISY1Q9ULR0 285 aaKnown RBP9.76□□□□□ -0.85
TRIM4-204ENST00000447480 TOPAZ1Q8N9V7 1692 aa9.76□□□□□ -0.85
TRIM4-204ENST00000447480 MST1RQ04912 1400 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 C1orf167Q5SNV9 1468 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 RIMBP2O15034 1052 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 NGDNQ8NEJ9 315 aaKnown RBP9.75□□□□□ -0.85
TRIM4-204ENST00000447480 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 KDM2BQ8NHM5 1336 aa9.75□□□□□ -0.85
TRIM4-204ENST00000447480 PPIP5K1Q6PFW1 1433 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 BECN1Q14457 450 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 ESCO1Q5FWF5 840 aa9.74□□□□□ -0.85
TRIM4-204ENST00000447480 LARP6Q9BRS8 491 aaKnown RBP9.74□□□□□ -0.85
TRIM4-204ENST00000447480 RGPD8O14715 1765 aaPredicted RBP9.73□□□□□ -0.85
TRIM4-204ENST00000447480 ANKRD36BQ8N2N9 1353 aa9.73□□□□□ -0.85
TRIM4-204ENST00000447480 AKAP12Q02952 1782 aa9.73□□□□□ -0.85
TRIM4-204ENST00000447480 NHSL1Q5SYE7 1610 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 AHDC1Q5TGY3 1603 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 HOXB1P14653 301 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 EMP3P54852 163 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 TTC21AQ8NDW8 1320 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
TRIM4-204ENST00000447480 ARSIQ5FYB1 569 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 GPR153Q6NV75 609 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.86
TRIM4-204ENST00000447480 POLR3GLQ9BT43 218 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 MAPK8IP3Q9UPT6 1336 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 NSD2O96028 1365 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 NPC1L1Q9UHC9 1359 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 USP32Q8NFA0 1604 aa9.71□□□□□ -0.86
TRIM4-204ENST00000447480 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 SLC34A2O95436 690 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 NPM2Q86SE8 214 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 FBXO41Q8TF61 875 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 LRRC59Q96AG4 307 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 DDX27Q96GQ7 796 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 SBNO1A3KN83 1393 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 DISP3Q9P2K9 1392 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 EDC4Q6P2E9 1401 aaKnown RBP9.7□□□□□ -0.86
TRIM4-204ENST00000447480 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
TRIM4-204ENST00000447480 BRINP3Q76B58 766 aa9.69□□□□□ -0.86
TRIM4-204ENST00000447480 FRAT1Q92837 279 aaPredicted RBP9.69□□□□□ -0.86
TRIM4-204ENST00000447480 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
TRIM4-204ENST00000447480 KNSTRNQ9Y448 316 aa9.69□□□□□ -0.86
TRIM4-204ENST00000447480 LAS1LQ9Y4W2 734 aaKnown RBP9.69□□□□□ -0.86
TRIM4-204ENST00000447480 MYOM1P52179 1685 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 ACEP12821 1306 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 MFSD10Q14728 455 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
TRIM4-204ENST00000447480 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
TRIM4-204ENST00000447480 USP6P35125 1406 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 CPSF1Q10570 1443 aaKnown RBP9.67□□□□□ -0.86
TRIM4-204ENST00000447480 PTMSP20962 102 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 PIP4K2BP78356 416 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 TRMT2AQ8IZ69 625 aaKnown RBP9.67□□□□□ -0.86
TRIM4-204ENST00000447480 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
TRIM4-204ENST00000447480 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
TRIM4-204ENST00000447480 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 FAM205CA6NFA0 338 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 C8orf34Q49A92 452 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
TRIM4-204ENST00000447480 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 A0A1W2PP64 1363 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 JCADQ9P266 1359 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 ZNF521Q96K83 1311 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 PRR36Q9H6K5 1346 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 FOXO3O43524 673 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 PMFBP1Q8TBY8 1022 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
TRIM4-204ENST00000447480 ORAI2Q96SN7 254 aa9.65□□□□□ -0.86
TRIM4-204ENST00000447480 ANKRD26Q9UPS8 1709 aa9.65□□□□□ -0.87
TRIM4-204ENST00000447480 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 SPATA31A6Q5VVP1 1343 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 NRKQ7Z2Y5 1582 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 EIF5BO60841 1220 aaKnown RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 NUDT7P0C024 238 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 HAP1P54257 671 aaPredicted RBP9.64□□□□□ -0.87
TRIM4-204ENST00000447480 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
TRIM4-204ENST00000447480 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms