RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.59■■□□□ 1.37
SDCBP-204ENST00000447182 BAG4O95429 457 aaKnown RBP23.58■■□□□ 1.37
SDCBP-204ENST00000447182 CEP85Q6P2H3 762 aa23.58■■□□□ 1.37
SDCBP-204ENST00000447182 PTPRCP08575 1304 aa23.58■■□□□ 1.37
SDCBP-204ENST00000447182 RTL1A6NKG5 1358 aa23.56■■□□□ 1.36
SDCBP-204ENST00000447182 NUCB2P80303 420 aa23.56■■□□□ 1.36
SDCBP-204ENST00000447182 C16orf71Q8IYS4 520 aaPredicted RBP23.56■■□□□ 1.36
SDCBP-204ENST00000447182 CYP2E1P05181 493 aaPredicted RBP23.55■■□□□ 1.36
SDCBP-204ENST00000447182 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
SDCBP-204ENST00000447182 EIF4A2Q14240 407 aaKnown RBP23.54■■□□□ 1.36
SDCBP-204ENST00000447182 TRIM44Q96DX7 344 aaPredicted RBP23.54■■□□□ 1.36
SDCBP-204ENST00000447182 MSH6P52701 1360 aa23.53■■□□□ 1.36
SDCBP-204ENST00000447182 NCKAP5LQ9HCH0 1330 aa23.53■■□□□ 1.36
SDCBP-204ENST00000447182 SDSP20132 328 aa23.53■■□□□ 1.36
SDCBP-204ENST00000447182 CASC1Q6TDU7 716 aa23.53■■□□□ 1.36
SDCBP-204ENST00000447182 SULT6B1Q6IMI4 303 aa23.53■■□□□ 1.36
SDCBP-204ENST00000447182 AEBP1Q8IUX7 1158 aa23.53■■□□□ 1.36
SDCBP-204ENST00000447182 CWC22Q9HCG8 908 aaKnown RBP23.53■■□□□ 1.36
SDCBP-204ENST00000447182 ERBB4Q15303 1308 aa23.52■■□□□ 1.36
SDCBP-204ENST00000447182 DDX49Q9Y6V7 483 aaKnown RBP23.52■■□□□ 1.36
SDCBP-204ENST00000447182 OTUD7AQ8TE49 926 aaPredicted RBP23.51■■□□□ 1.35
SDCBP-204ENST00000447182 RGPD1P0DJD0 1748 aa23.51■■□□□ 1.35
SDCBP-204ENST00000447182 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
SDCBP-204ENST00000447182 CCDC173Q0VFZ6 552 aa23.51■■□□□ 1.35
SDCBP-204ENST00000447182 PPP1R9BQ96SB3 815 aa23.51■■□□□ 1.35
SDCBP-204ENST00000447182 PRR36Q9H6K5 1346 aa23.5■■□□□ 1.35
SDCBP-204ENST00000447182 KRT24Q2M2I5 525 aa23.5■■□□□ 1.35
SDCBP-204ENST00000447182 UBE2Q2Q8WVN8 375 aa23.5■■□□□ 1.35
SDCBP-204ENST00000447182 NAP1L5Q96NT1 182 aaPredicted RBP23.5■■□□□ 1.35
SDCBP-204ENST00000447182 OVOS2A0A0J9YW53 1432 aa23.5■■□□□ 1.35
SDCBP-204ENST00000447182 OVOS2Q6IE36 1432 aa23.5■■□□□ 1.35
SDCBP-204ENST00000447182 REC8O95072 547 aa23.49■■□□□ 1.35
SDCBP-204ENST00000447182 CRB1P82279 1406 aa23.49■■□□□ 1.35
SDCBP-204ENST00000447182 ST18O60284 1047 aa23.48■■□□□ 1.35
SDCBP-204ENST00000447182 ZNF445P59923 1031 aa23.48■■□□□ 1.35
SDCBP-204ENST00000447182 MEIS3Q99687 375 aa23.48■■□□□ 1.35
SDCBP-204ENST00000447182 OSBPL3Q9H4L5 887 aa23.48■■□□□ 1.35
SDCBP-204ENST00000447182 NALCNQ8IZF0 1738 aa23.48■■□□□ 1.35
SDCBP-204ENST00000447182 TTC21BQ7Z4L5 1316 aa23.48■■□□□ 1.35
SDCBP-204ENST00000447182 NASPP49321 788 aaPredicted RBP23.47■■□□□ 1.35
SDCBP-204ENST00000447182 MCM10Q7L590 875 aa23.47■■□□□ 1.35
SDCBP-204ENST00000447182 HMMRO75330 724 aa23.47■■□□□ 1.35
SDCBP-204ENST00000447182 TOPAZ1Q8N9V7 1692 aa23.46■■□□□ 1.35
SDCBP-204ENST00000447182 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
SDCBP-204ENST00000447182 LMBRD1Q9NUN5 540 aa23.46■■□□□ 1.35
SDCBP-204ENST00000447182 PEAK1Q9H792 1746 aa23.46■■□□□ 1.35
SDCBP-204ENST00000447182 SMARCA5O60264 1052 aaPredicted RBP23.45■■□□□ 1.35
SDCBP-204ENST00000447182 MCTP1Q6DN14 999 aa23.45■■□□□ 1.34
SDCBP-204ENST00000447182 DIP2BQ9P265 1576 aa23.45■■□□□ 1.34
SDCBP-204ENST00000447182 ERC2O15083 957 aa23.44■■□□□ 1.34
SDCBP-204ENST00000447182 USP31Q70CQ4 1352 aa23.44■■□□□ 1.34
SDCBP-204ENST00000447182 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
SDCBP-204ENST00000447182 ANP32BQ92688 251 aaKnown RBP23.42■■□□□ 1.34
SDCBP-204ENST00000447182 PLEKHG3A1L390 1219 aa23.42■■□□□ 1.34
SDCBP-204ENST00000447182 CCT4P50991 539 aaKnown RBP23.42■■□□□ 1.34
SDCBP-204ENST00000447182 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
SDCBP-204ENST00000447182 ARHGEF10O15013 1369 aa23.42■■□□□ 1.34
SDCBP-204ENST00000447182 USP6P35125 1406 aa23.41■■□□□ 1.34
SDCBP-204ENST00000447182 ROBO2Q9HCK4 1378 aa23.41■■□□□ 1.34
SDCBP-204ENST00000447182 PDE1AP54750 535 aa23.41■■□□□ 1.34
SDCBP-204ENST00000447182 PKP1Q13835 747 aa23.41■■□□□ 1.34
SDCBP-204ENST00000447182 ACEP12821 1306 aa23.4■■□□□ 1.34
SDCBP-204ENST00000447182 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
SDCBP-204ENST00000447182 ZSCAN23Q3MJ62 389 aa23.39■■□□□ 1.34
SDCBP-204ENST00000447182 APBB1O00213 710 aa23.39■■□□□ 1.33
SDCBP-204ENST00000447182 ZGPATQ8N5A5 531 aaKnown RBP23.39■■□□□ 1.33
SDCBP-204ENST00000447182 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
SDCBP-204ENST00000447182 ZDHHC9Q9Y397 364 aa23.38■■□□□ 1.33
SDCBP-204ENST00000447182 TUBGCP6Q96RT7 1819 aa23.38■■□□□ 1.33
SDCBP-204ENST00000447182 CAVIN1Q6NZI2 390 aaKnown RBP23.38■■□□□ 1.33
SDCBP-204ENST00000447182 SALL3Q9BXA9 1300 aa23.37■■□□□ 1.33
SDCBP-204ENST00000447182 TSPOAP1O95153 1857 aa23.37■■□□□ 1.33
SDCBP-204ENST00000447182 ZSCAN30Q86W11 494 aa23.37■■□□□ 1.33
SDCBP-204ENST00000447182 SSH2Q76I76 1423 aa23.36■■□□□ 1.33
SDCBP-204ENST00000447182 MLECQ14165 292 aa23.36■■□□□ 1.33
SDCBP-204ENST00000447182 HS1BP3Q53T59 392 aa23.36■■□□□ 1.33
SDCBP-204ENST00000447182 FMN2Q9NZ56 1722 aa23.36■■□□□ 1.33
SDCBP-204ENST00000447182 MCM2P49736 904 aa23.35■■□□□ 1.33
SDCBP-204ENST00000447182 G2E3Q7L622 706 aa23.35■■□□□ 1.33
SDCBP-204ENST00000447182 KDRP35968 1356 aa23.35■■□□□ 1.33
SDCBP-204ENST00000447182 GNAI2P04899 355 aa23.35■■□□□ 1.33
SDCBP-204ENST00000447182 TSPYL4Q9UJ04 414 aa23.35■■□□□ 1.33
SDCBP-204ENST00000447182 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
SDCBP-204ENST00000447182 MAP3K19Q56UN5 1328 aa23.34■■□□□ 1.33
SDCBP-204ENST00000447182 ADAMTS13Q76LX8 1427 aa23.34■■□□□ 1.33
SDCBP-204ENST00000447182 RTF1Q92541 710 aaKnown RBP23.34■■□□□ 1.33
SDCBP-204ENST00000447182 NCLP19338 710 aaKnown RBP23.33■■□□□ 1.33
SDCBP-204ENST00000447182 MTHFSDQ2M296 383 aaKnown RBP23.33■■□□□ 1.33
SDCBP-204ENST00000447182 F6X3S4 739 aa23.33■■□□□ 1.32
SDCBP-204ENST00000447182 PRPF40AO75400 957 aaKnown RBP23.33■■□□□ 1.32
SDCBP-204ENST00000447182 SLC4A10Q6U841 1118 aa23.33■■□□□ 1.32
SDCBP-204ENST00000447182 GPT2Q8TD30 523 aa23.33■■□□□ 1.32
SDCBP-204ENST00000447182 UBR1Q8IWV7 1749 aa23.32■■□□□ 1.32
SDCBP-204ENST00000447182 MIS18AQ9NYP9 233 aa23.32■■□□□ 1.32
SDCBP-204ENST00000447182 IL17RAQ96F46 866 aa23.32■■□□□ 1.32
SDCBP-204ENST00000447182 PDLIM2Q96JY6 352 aa23.32■■□□□ 1.32
SDCBP-204ENST00000447182 ESYT1Q9BSJ8 1104 aa23.32■■□□□ 1.32
SDCBP-204ENST00000447182 RRP9O43818 475 aaKnown RBP23.31■■□□□ 1.32
SDCBP-204ENST00000447182 ANAPC15P60006 121 aa23.31■■□□□ 1.32
SDCBP-204ENST00000447182 TTC21AQ8NDW8 1320 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms