RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 PLCH2O75038 1416 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 CCDC70Q6NSX1 233 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 CTNNA3Q9UI47 895 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 TTC21BQ7Z4L5 1316 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 IFIT1P09914 478 aaKnown RBP21.24■□□□□ 0.99
ATG9A-215ENST00000446716 EPS15P42566 896 aa21.24■□□□□ 0.99
ATG9A-215ENST00000446716 AKAP2Q9Y2D5 859 aa21.23■□□□□ 0.99
ATG9A-215ENST00000446716 CAVIN4Q5BKX8 364 aa21.23■□□□□ 0.99
ATG9A-215ENST00000446716 CHD1LQ86WJ1 897 aa21.23■□□□□ 0.99
ATG9A-215ENST00000446716 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
ATG9A-215ENST00000446716 MAP3K1Q13233 1512 aa21.23■□□□□ 0.99
ATG9A-215ENST00000446716 SLFN5Q08AF3 891 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 SOGA3Q5TF21 947 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 UBAC1Q9BSL1 405 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 ANKRD1Q15327 319 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 CCDC184Q52MB2 194 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 ANKRD24Q8TF21 1146 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 ANKIB1Q9P2G1 1089 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 SCAF11Q99590 1463 aaKnown RBP21.22■□□□□ 0.99
ATG9A-215ENST00000446716 ABCC11Q96J66 1382 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 TMEM57Q8N5G2 664 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 CT47A1Q5JQC4 288 aaPredicted RBP21.22■□□□□ 0.99
ATG9A-215ENST00000446716 EXOC6BQ9Y2D4 811 aa21.22■□□□□ 0.99
ATG9A-215ENST00000446716 GPATCH8Q9UKJ3 1502 aaKnown RBP21.21■□□□□ 0.99
ATG9A-215ENST00000446716 NPHP3Q7Z494 1330 aa21.21■□□□□ 0.99
ATG9A-215ENST00000446716 OFD1O75665 1012 aa21.21■□□□□ 0.99
ATG9A-215ENST00000446716 KRT18P05783 430 aaKnown RBP21.21■□□□□ 0.99
ATG9A-215ENST00000446716 AIDAQ96BJ3 306 aa21.21■□□□□ 0.99
ATG9A-215ENST00000446716 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
ATG9A-215ENST00000446716 IFIT5Q13325 482 aaKnown RBP21.21■□□□□ 0.99
ATG9A-215ENST00000446716 DBF4Q9UBU7 674 aaPredicted RBP21.21■□□□□ 0.99
ATG9A-215ENST00000446716 ATP10BO94823 1461 aa21.2■□□□□ 0.98
ATG9A-215ENST00000446716 STK38Q15208 465 aa21.2■□□□□ 0.98
ATG9A-215ENST00000446716 AK7Q96M32 723 aa21.2■□□□□ 0.98
ATG9A-215ENST00000446716 STK3Q13188 491 aa21.2■□□□□ 0.98
ATG9A-215ENST00000446716 BCL11BQ9C0K0 894 aaPredicted RBP21.2■□□□□ 0.98
ATG9A-215ENST00000446716 TEX13AQ9BXU3 409 aaPredicted RBP21.2■□□□□ 0.98
ATG9A-215ENST00000446716 NAT10Q9H0A0 1025 aaKnown RBP21.2■□□□□ 0.98
ATG9A-215ENST00000446716 RPGRQ92834 1020 aaKnown RBP21.19■□□□□ 0.98
ATG9A-215ENST00000446716 ZNF396Q96N95 335 aaPredicted RBP21.19■□□□□ 0.98
ATG9A-215ENST00000446716 KINO60870 393 aaKnown RBP21.19■□□□□ 0.98
ATG9A-215ENST00000446716 WWC2Q6AWC2 1192 aa21.19■□□□□ 0.98
ATG9A-215ENST00000446716 CWC27Q6UX04 472 aaKnown RBP21.19■□□□□ 0.98
ATG9A-215ENST00000446716 KIF1BPQ96EK5 621 aa21.19■□□□□ 0.98
ATG9A-215ENST00000446716 HYPKQ9NX55 129 aa21.19■□□□□ 0.98
ATG9A-215ENST00000446716 GSE1Q14687 1217 aa21.19■□□□□ 0.98
ATG9A-215ENST00000446716 BLOC1S2Q6QNY1 142 aa21.19■□□□□ 0.98
ATG9A-215ENST00000446716 HOMER1Q86YM7 354 aa21.18■□□□□ 0.98
ATG9A-215ENST00000446716 ZNF592Q92610 1267 aa21.18■□□□□ 0.98
ATG9A-215ENST00000446716 ZBTB3Q9H5J0 574 aa21.18■□□□□ 0.98
ATG9A-215ENST00000446716 A2MP01023 1474 aa21.18■□□□□ 0.98
ATG9A-215ENST00000446716 DNAAF4Q8WXU2 420 aa21.18■□□□□ 0.98
ATG9A-215ENST00000446716 GPTP24298 496 aa21.17■□□□□ 0.98
ATG9A-215ENST00000446716 NUTM1Q86Y26 1132 aa21.17■□□□□ 0.98
ATG9A-215ENST00000446716 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
ATG9A-215ENST00000446716 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
ATG9A-215ENST00000446716 NAP1L1P55209 391 aaKnown RBP21.17■□□□□ 0.98
ATG9A-215ENST00000446716 SSH1Q8WYL5 1049 aa21.16■□□□□ 0.98
ATG9A-215ENST00000446716 ODF2Q5BJF6 829 aa21.16■□□□□ 0.98
ATG9A-215ENST00000446716 HSPA2P54652 639 aa21.16■□□□□ 0.98
ATG9A-215ENST00000446716 KRI1Q8N9T8 703 aaKnown RBP21.16■□□□□ 0.98
ATG9A-215ENST00000446716 A0A087WZG4 1122 aa21.15■□□□□ 0.98
ATG9A-215ENST00000446716 CEBPZQ03701 1054 aaKnown RBP21.15■□□□□ 0.98
ATG9A-215ENST00000446716 ZNF219Q9P2Y4 722 aaPredicted RBP21.15■□□□□ 0.98
ATG9A-215ENST00000446716 NSD2O96028 1365 aa21.15■□□□□ 0.98
ATG9A-215ENST00000446716 ALDH1L2Q3SY69 923 aa21.15■□□□□ 0.98
ATG9A-215ENST00000446716 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
ATG9A-215ENST00000446716 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
ATG9A-215ENST00000446716 F6X3S4 739 aa21.14■□□□□ 0.98
ATG9A-215ENST00000446716 USP5P45974 858 aa21.14■□□□□ 0.97
ATG9A-215ENST00000446716 FIBPO43427 364 aa21.14■□□□□ 0.97
ATG9A-215ENST00000446716 KRT32Q14532 448 aa21.14■□□□□ 0.97
ATG9A-215ENST00000446716 ANKRD18BA2A2Z9 1011 aa21.13■□□□□ 0.97
ATG9A-215ENST00000446716 ZNF287Q9HBT7 754 aa21.13■□□□□ 0.97
ATG9A-215ENST00000446716 CRACR2BQ8N4Y2 399 aaPredicted RBP21.13■□□□□ 0.97
ATG9A-215ENST00000446716 C11orf95C9JLR9 678 aaPredicted RBP21.13■□□□□ 0.97
ATG9A-215ENST00000446716 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
ATG9A-215ENST00000446716 CDKL5O76039 1030 aa21.13■□□□□ 0.97
ATG9A-215ENST00000446716 DZIP1Q86YF9 867 aaKnown RBP21.13■□□□□ 0.97
ATG9A-215ENST00000446716 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
ATG9A-215ENST00000446716 IMMTQ16891 758 aaKnown RBP21.12■□□□□ 0.97
ATG9A-215ENST00000446716 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
ATG9A-215ENST00000446716 TTC21AQ8NDW8 1320 aa21.12■□□□□ 0.97
ATG9A-215ENST00000446716 POLR3DP05423 398 aaPredicted RBP21.12■□□□□ 0.97
ATG9A-215ENST00000446716 JAKMIP1Q96N16 626 aaKnown RBP21.12■□□□□ 0.97
ATG9A-215ENST00000446716 C8orf37Q96NL8 207 aa21.12■□□□□ 0.97
ATG9A-215ENST00000446716 C6orf229H3BNL8 230 aa21.11■□□□□ 0.97
ATG9A-215ENST00000446716 SLC5A1P13866 664 aa21.11■□□□□ 0.97
ATG9A-215ENST00000446716 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
ATG9A-215ENST00000446716 RFC4P35249 363 aa21.11■□□□□ 0.97
ATG9A-215ENST00000446716 ZFYVE27Q5T4F4 411 aa21.11■□□□□ 0.97
ATG9A-215ENST00000446716 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
ATG9A-215ENST00000446716 NOL7Q9UMY1 257 aaKnown RBP21.11■□□□□ 0.97
ATG9A-215ENST00000446716 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
ATG9A-215ENST00000446716 FLIIQ13045 1269 aa21.1■□□□□ 0.97
ATG9A-215ENST00000446716 BOLA2Q9H3K6 86 aa21.1■□□□□ 0.97
ATG9A-215ENST00000446716 ZHX3Q9H4I2 956 aa21.1■□□□□ 0.97
ATG9A-215ENST00000446716 RARSP54136 660 aaKnown RBP21.1■□□□□ 0.97
ATG9A-215ENST00000446716 MBD3O95983 291 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms