RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 ZSCAN31Q96LW9 406 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 AMOTL2Q9Y2J4 779 aa10.13□□□□□ -0.79
PTPN3-204ENST00000446349 WASLO00401 505 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 ZSCAN29Q8IWY8 852 aaPredicted RBP10.13□□□□□ -0.79
PTPN3-204ENST00000446349 EXOC6Q8TAG9 804 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 SMC2O95347 1197 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 ALDH1L2Q3SY69 923 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 ERCC4Q92889 916 aaPredicted RBP10.12□□□□□ -0.79
PTPN3-204ENST00000446349 CDC5LQ99459 802 aaKnown RBP10.12□□□□□ -0.79
PTPN3-204ENST00000446349 ZNHIT6Q9NWK9 470 aaKnown RBP10.12□□□□□ -0.79
PTPN3-204ENST00000446349 LRP2BPQ9P2M1 347 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 SCAF11Q99590 1463 aaKnown RBP10.12□□□□□ -0.79
PTPN3-204ENST00000446349 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 ARGLU1Q9NWB6 273 aaPredicted RBP10.12□□□□□ -0.79
PTPN3-204ENST00000446349 LDHCP07864 332 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 SPTY2D1Q68D10 685 aaPredicted RBP10.12□□□□□ -0.79
PTPN3-204ENST00000446349 TDO2P48775 406 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 PPP4R3AQ6IN85 833 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 WDR7Q9Y4E6 1490 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
PTPN3-204ENST00000446349 HOMER1Q86YM7 354 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 FAM177BA6PVY3 158 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 ABCC10Q5T3U5 1492 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 FMNL2Q96PY5 1086 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 SLC5A1P13866 664 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 EXOSC9Q06265 439 aaKnown RBP10.11□□□□□ -0.79
PTPN3-204ENST00000446349 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 KIF1BPQ96EK5 621 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
PTPN3-204ENST00000446349 U3KPZ7 1027 aaPredicted RBP10.11□□□□□ -0.79
PTPN3-204ENST00000446349 NAP1L1P55209 391 aaKnown RBP10.11□□□□□ -0.79
PTPN3-204ENST00000446349 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 TEX35Q5T0J7 233 aa10.11□□□□□ -0.79
PTPN3-204ENST00000446349 HMGB1P09429 215 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 ST5P78524 1137 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 PHAXQ9H814 394 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 CFAP45Q9UL16 551 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 MYL6BP14649 208 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 RAB34Q9BZG1 259 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 SEC63Q9UGP8 760 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 EIF4G3O43432 1585 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 A2MP01023 1474 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 IMMTQ16891 758 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 PTPRCP08575 1304 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 PDE4CQ08493 712 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 ERLIN2O94905 339 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 TTF1Q15361 905 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 KRT28Q7Z3Y7 464 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 ANKRD18AQ8IVF6 992 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 PLCH2O75038 1416 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 NAIPQ13075 1403 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 MAP3K12Q12852 859 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 FOXD4L5Q5VV16 416 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
PTPN3-204ENST00000446349 ZGPATQ8N5A5 531 aaKnown RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
PTPN3-204ENST00000446349 RAI14Q9P0K7 980 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 ZRSR2Q15696 482 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 CCDC178Q5BJE1 867 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 METTL24Q5JXM2 366 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 PAF1Q8N7H5 531 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 IFIT5Q13325 482 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 ZFYVE27Q5T4F4 411 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 MYO1BO43795 1136 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 DEKP35659 375 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 STK38Q15208 465 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 ZC3H6P61129 1189 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 CCAR2Q8N163 923 aaKnown RBP10.09□□□□□ -0.79
PTPN3-204ENST00000446349 AIDAQ96BJ3 306 aa10.09□□□□□ -0.79
PTPN3-204ENST00000446349 ZNF76P36508 570 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 DBF4Q9UBU7 674 aaPredicted RBP10.08□□□□□ -0.8
PTPN3-204ENST00000446349 ASXL2Q76L83 1435 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 NUP160Q12769 1436 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 CRACR2BQ8N4Y2 399 aaPredicted RBP10.08□□□□□ -0.8
PTPN3-204ENST00000446349 ABCC5O15440 1437 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 SRGAP3O43295 1099 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 PUS7Q96PZ0 661 aaKnown RBP10.08□□□□□ -0.8
PTPN3-204ENST00000446349 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
PTPN3-204ENST00000446349 WDR33Q9C0J8 1336 aaKnown RBP10.08□□□□□ -0.8
PTPN3-204ENST00000446349 GSTO1P78417 241 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 DCTN1Q14203 1278 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 BLOC1S2Q6QNY1 142 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 BAG3O95817 575 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 ANKRD36BQ8N2N9 1353 aa10.08□□□□□ -0.8
PTPN3-204ENST00000446349 DZIP1Q86YF9 867 aaKnown RBP10.07□□□□□ -0.8
PTPN3-204ENST00000446349 CCDC12Q8WUD4 166 aaPredicted RBP10.07□□□□□ -0.8
PTPN3-204ENST00000446349 CUL5Q93034 780 aa10.07□□□□□ -0.8
PTPN3-204ENST00000446349 ANKRD18BA2A2Z9 1011 aa10.07□□□□□ -0.8
PTPN3-204ENST00000446349 KIF20AO95235 890 aa10.07□□□□□ -0.8
PTPN3-204ENST00000446349 MVPQ14764 893 aaKnown RBP10.07□□□□□ -0.8
PTPN3-204ENST00000446349 AACSQ86V21 672 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms